RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 CLVS1Q8IUQ0 354 aaPredicted RBP17.31■□□□□ 0.36
HDLBP-220ENST00000442730 NUDCD2Q8WVJ2 157 aa17.31■□□□□ 0.36
HDLBP-220ENST00000442730 C5orf30Q96GV9 206 aa17.31■□□□□ 0.36
HDLBP-220ENST00000442730 P2RX4Q99571 388 aa17.31■□□□□ 0.36
HDLBP-220ENST00000442730 RNF5Q99942 180 aa17.31■□□□□ 0.36
HDLBP-220ENST00000442730 GINS4Q9BRT9 223 aa17.31■□□□□ 0.36
HDLBP-220ENST00000442730 DCSTAMPQ9H295 470 aa17.31■□□□□ 0.36
HDLBP-220ENST00000442730 NECAP2Q9NVZ3 263 aa17.31■□□□□ 0.36
HDLBP-220ENST00000442730 SCOCQ9UIL1 159 aa17.31■□□□□ 0.36
HDLBP-220ENST00000442730 WSB1Q9Y6I7 421 aa17.31■□□□□ 0.36
HDLBP-220ENST00000442730 TMEM235A6NFC5 223 aa17.3■□□□□ 0.36
HDLBP-220ENST00000442730 PPIFP30405 207 aaKnown RBP17.3■□□□□ 0.36
HDLBP-220ENST00000442730 UBE2NLQ5JXB2 153 aa17.3■□□□□ 0.36
HDLBP-220ENST00000442730 FOXB2Q5VYV0 432 aa17.3■□□□□ 0.36
HDLBP-220ENST00000442730 REC114Q7Z4M0 266 aa17.3■□□□□ 0.36
HDLBP-220ENST00000442730 PDPNQ86YL7 162 aa17.3■□□□□ 0.36
HDLBP-220ENST00000442730 H1FOOQ8IZA3 346 aaPredicted RBP17.3■□□□□ 0.36
HDLBP-220ENST00000442730 MYOZ3Q8TDC0 251 aa17.3■□□□□ 0.36
HDLBP-220ENST00000442730 KCTD12Q96CX2 325 aaKnown RBP17.3■□□□□ 0.36
HDLBP-220ENST00000442730 RAX2Q96IS3 184 aa17.3■□□□□ 0.36
HDLBP-220ENST00000442730 SDHAF2Q9NX18 166 aa17.3■□□□□ 0.36
HDLBP-220ENST00000442730 FBXO7Q9Y3I1 522 aa17.3■□□□□ 0.36
HDLBP-220ENST00000442730 TRAV41A0A0B4J266 112 aa17.29■□□□□ 0.36
HDLBP-220ENST00000442730 APOA2P02652 100 aa17.29■□□□□ 0.36
HDLBP-220ENST00000442730 MYCNOSP40205 109 aa17.29■□□□□ 0.36
HDLBP-220ENST00000442730 CDX1P47902 265 aaPredicted RBP17.29■□□□□ 0.36
HDLBP-220ENST00000442730 PLGLAQ15195 96 aa17.29■□□□□ 0.36
HDLBP-220ENST00000442730 PSG5Q15238 335 aa17.29■□□□□ 0.36
HDLBP-220ENST00000442730 DEFB136Q30KP8 78 aa17.29■□□□□ 0.36
HDLBP-220ENST00000442730 ZNF260Q3ZCT1 412 aa17.29■□□□□ 0.36
HDLBP-220ENST00000442730 C19orf54Q5BKX5 351 aa17.29■□□□□ 0.36
HDLBP-220ENST00000442730 SAMD12Q8N8I0 201 aa17.29■□□□□ 0.36
HDLBP-220ENST00000442730 DUX3Q96PT4 197 aa17.29■□□□□ 0.36
HDLBP-220ENST00000442730 GAB2Q9UQC2 676 aa17.29■□□□□ 0.36
HDLBP-220ENST00000442730 A0A0A6YYH2 397 aa17.28■□□□□ 0.36
HDLBP-220ENST00000442730 A6NJ64 397 aa17.28■□□□□ 0.36
HDLBP-220ENST00000442730 FCN1O00602 326 aa17.28■□□□□ 0.36
HDLBP-220ENST00000442730 SSX5O60225 188 aa17.28■□□□□ 0.36
HDLBP-220ENST00000442730 NOL3O60936 208 aaKnown RBP17.28■□□□□ 0.36
HDLBP-220ENST00000442730 SPDEFO95238 335 aa17.28■□□□□ 0.36
HDLBP-220ENST00000442730 DUS4LO95620 317 aaKnown RBP17.28■□□□□ 0.36
HDLBP-220ENST00000442730 IGLV1-40P01703 118 aa17.28■□□□□ 0.36
HDLBP-220ENST00000442730 CRIP2P52943 208 aaPredicted RBP17.28■□□□□ 0.36
HDLBP-220ENST00000442730 GNG2P59768 71 aa17.28■□□□□ 0.36
HDLBP-220ENST00000442730 CX3CL1P78423 397 aa17.28■□□□□ 0.36
HDLBP-220ENST00000442730 ZNF660Q6AZW8 331 aaPredicted RBP17.28■□□□□ 0.36
HDLBP-220ENST00000442730 RAB2BQ8WUD1 216 aa17.28■□□□□ 0.36
HDLBP-220ENST00000442730 ST6GALNAC5Q9BVH7 336 aa17.28■□□□□ 0.36
HDLBP-220ENST00000442730 METTL1Q9UBP6 276 aaKnown RBP17.28■□□□□ 0.36
HDLBP-220ENST00000442730 PITPNAQ00169 270 aa17.27■□□□□ 0.36
HDLBP-220ENST00000442730 MINDY2Q8NBR6 621 aa17.27■□□□□ 0.36
HDLBP-220ENST00000442730 C4orf3Q8WVX3 66 aa17.27■□□□□ 0.36
HDLBP-220ENST00000442730 TSNAXQ99598 290 aaKnown RBP17.27■□□□□ 0.36
HDLBP-220ENST00000442730 KLK15Q9H2R5 256 aa17.27■□□□□ 0.36
HDLBP-220ENST00000442730 AURKAIP1Q9NWT8 199 aaPredicted RBP17.27■□□□□ 0.36
HDLBP-220ENST00000442730 TRAV18A0A075B6X5 111 aa17.26■□□□□ 0.35
HDLBP-220ENST00000442730 CCL24O00175 119 aa17.26■□□□□ 0.35
HDLBP-220ENST00000442730 RORCP51449 518 aa17.26■□□□□ 0.35
HDLBP-220ENST00000442730 RPS16P62249 146 aaKnown RBP17.26■□□□□ 0.35
HDLBP-220ENST00000442730 ECSCRQ19T08 205 aa17.26■□□□□ 0.35
HDLBP-220ENST00000442730 BCL7BQ9BQE9 202 aa17.26■□□□□ 0.35
HDLBP-220ENST00000442730 DIABLOQ9NR28 239 aa17.26■□□□□ 0.35
HDLBP-220ENST00000442730 TPSG1Q9NRR2 321 aa17.26■□□□□ 0.35
HDLBP-220ENST00000442730 SLC35D1Q9NTN3 355 aa17.26■□□□□ 0.35
HDLBP-220ENST00000442730 EGR2P11161 476 aaPredicted RBP17.25■□□□□ 0.35
HDLBP-220ENST00000442730 TMBIM6P55061 237 aa17.25■□□□□ 0.35
HDLBP-220ENST00000442730 KIAA0141Q14154 515 aaPredicted RBP17.25■□□□□ 0.35
HDLBP-220ENST00000442730 SPCS2Q15005 226 aa17.25■□□□□ 0.35
HDLBP-220ENST00000442730 ACOT12Q8WYK0 555 aa17.25■□□□□ 0.35
HDLBP-220ENST00000442730 AP3S1Q92572 193 aa17.25■□□□□ 0.35
HDLBP-220ENST00000442730 FLYWCH2Q96CP2 140 aaKnown RBP17.25■□□□□ 0.35
HDLBP-220ENST00000442730 COMMD3Q9UBI1 195 aa17.25■□□□□ 0.35
HDLBP-220ENST00000442730 RBM7Q9Y580 266 aaKnown RBP17.25■□□□□ 0.35
HDLBP-220ENST00000442730 SLC25A17O43808 307 aa17.24■□□□□ 0.35
HDLBP-220ENST00000442730 CA2P00918 260 aa17.24■□□□□ 0.35
HDLBP-220ENST00000442730 IGLV2-23P01705 113 aa17.24■□□□□ 0.35
HDLBP-220ENST00000442730 TMEM65Q6PI78 240 aa17.24■□□□□ 0.35
HDLBP-220ENST00000442730 ABHD5Q8WTS1 349 aa17.24■□□□□ 0.35
HDLBP-220ENST00000442730 CLCC1Q96S66 551 aa17.24■□□□□ 0.35
HDLBP-220ENST00000442730 A3GALT2U3KPV4 340 aa17.24■□□□□ 0.35
HDLBP-220ENST00000442730 SOX15O60248 233 aa17.23■□□□□ 0.35
HDLBP-220ENST00000442730 EIF4EP06730 217 aaKnown RBP17.23■□□□□ 0.35
HDLBP-220ENST00000442730 CTXN2P0C2S0 81 aa17.23■□□□□ 0.35
HDLBP-220ENST00000442730 FHL3Q13643 280 aa17.23■□□□□ 0.35
HDLBP-220ENST00000442730 TMEM69Q5SWH9 247 aa17.23■□□□□ 0.35
HDLBP-220ENST00000442730 CNIH2Q6PI25 160 aa17.23■□□□□ 0.35
HDLBP-220ENST00000442730 ZNF562Q6V9R5 426 aa17.23■□□□□ 0.35
HDLBP-220ENST00000442730 ZNF491Q8N8L2 437 aa17.23■□□□□ 0.35
HDLBP-220ENST00000442730 DDB2Q92466 427 aa17.23■□□□□ 0.35
HDLBP-220ENST00000442730 S100A16Q96FQ6 103 aaKnown RBP17.23■□□□□ 0.35
HDLBP-220ENST00000442730 UBE2E2Q96LR5 201 aa17.23■□□□□ 0.35
HDLBP-220ENST00000442730 GPR61Q9BZJ8 451 aa17.23■□□□□ 0.35
HDLBP-220ENST00000442730 GNB4Q9HAV0 340 aa17.23■□□□□ 0.35
HDLBP-220ENST00000442730 ANXA10Q9UJ72 324 aa17.23■□□□□ 0.35
HDLBP-220ENST00000442730 FOXA2Q9Y261 457 aaPredicted RBP17.23■□□□□ 0.35
HDLBP-220ENST00000442730 XRCC3O43542 346 aa17.22■□□□□ 0.35
HDLBP-220ENST00000442730 ZNF182P17025 639 aaPredicted RBP17.22■□□□□ 0.35
HDLBP-220ENST00000442730 NFYAP23511 347 aaPredicted RBP17.22■□□□□ 0.35
HDLBP-220ENST00000442730 HOXD3P31249 432 aaPredicted RBP17.22■□□□□ 0.35
HDLBP-220ENST00000442730 DUTP33316 252 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms