RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 KIR2DS4P43632 304 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 KIR2DS1Q14954 304 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 IGFL2Q6UWQ7 119 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 TOMM20LQ6UXN7 152 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 WDYHV1Q96HA8 205 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 UCN2Q96RP3 112 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 GPR35Q9HC97 309 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 PXMP4Q9Y6I8 212 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 hCG_38984A0A1B0GV85 526 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 FKBP2P26885 142 aaKnown RBP7.24□□□□□ -1.25
HPS4-206ENST00000439453 ANKRD39Q53RE8 183 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 ACSM6Q6P461 480 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 MANBALQ9NQG1 85 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 TIMM9Q9Y5J7 89 aa7.24□□□□□ -1.25
HPS4-206ENST00000439453 COL6A6A6NMZ7 2263 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 PIGBOS1A0A0B4J2F0 54 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 CTXND1A0A1B0GTU2 59 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 FAM90A10PA6NDY2 464 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 FAM90A18PA6NE21 464 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 FAM90A16PA6NEW6 464 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 FAM90A20PA6NIJ5 464 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 FAM90A8PA6NJQ4 464 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 FAM90A7PA6NKC0 464 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 FAM90A22PA8MWA6 464 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 FAM90A12PA8MX19 464 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 FAM90A5PA8MXJ8 464 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 FAM90A23PA8MXZ1 464 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 FAM90A15PP0C7V4 464 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 FAM90A13PP0C7W8 464 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 FAM90A14PP0C7W9 464 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 FAM90A24PP0C7X0 464 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 BCL3P20749 454 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 CLDN15P56746 228 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 SLC38A11Q08AI6 406 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 TDRG1Q3Y452 100 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 SPANXN5Q5MJ07 72 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 FADS6Q8N9I5 356 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 NEIL1Q96FI4 390 aaPredicted RBP7.23□□□□□ -1.25
HPS4-206ENST00000439453 OR2J1Q9GZK6 312 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 TMEM106BQ9NUM4 274 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 ZNF816-ZNF321PA0A0X1KG74 233 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 HSPB6O14558 160 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 YPEL1O60688 119 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 IGKV1-39P01597 117 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 IGKV1D-39P04432 117 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 PATE4P0C8F1 98 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 CD33P20138 364 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 TNFSF10P50591 281 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 UBE2NP61088 152 aaKnown RBP7.23□□□□□ -1.25
HPS4-206ENST00000439453 PPP1CBP62140 327 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 TEX43Q6ZNM6 134 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 OR10V1Q8NGI7 309 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 OR1K1Q8NGR3 316 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 CMTM2Q8TAZ6 248 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 LSM10Q969L4 123 aaKnown RBP7.23□□□□□ -1.25
HPS4-206ENST00000439453 YPEL2Q96QA6 119 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 SAMD10Q9BYL1 202 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 ATP23Q9Y6H3 246 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 PAGE4O60829 102 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 IL6RP08887 468 aaPredicted RBP7.23□□□□□ -1.25
HPS4-206ENST00000439453 TMEM144Q7Z5S9 345 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 ZNF843Q8N446 348 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 ZIC4Q8N9L1 334 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 DTD1Q8TEA8 209 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 BTF3L4Q96K17 158 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 DOCK11Q5JSL3 2073 aa7.23□□□□□ -1.25
HPS4-206ENST00000439453 OR6C6A6NF89 314 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 VAMP5O95183 116 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 ZNF32P17041 273 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 PRAMEF20Q5VT98 475 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 ZNF324BQ6AW86 544 aaPredicted RBP7.22□□□□□ -1.25
HPS4-206ENST00000439453 Q6ZWC4 215 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 ARL6IP6Q8N6S5 226 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 RBMXL3Q8N7X1 1067 aaKnown RBP7.22□□□□□ -1.25
HPS4-206ENST00000439453 Q8NFD4 153 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 HS3ST6Q96QI5 342 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 ZNF391Q9UJN7 358 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 OR2W1Q9Y3N9 320 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 MLNRO43193 412 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 ZFAND5O76080 213 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 IGKV1-5P01602 117 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 CCL11P51671 97 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 RANP62826 216 aaKnown RBP7.22□□□□□ -1.25
HPS4-206ENST00000439453 OR5I1Q13606 314 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 KRTAP27-1Q3LI81 207 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 TPTE2P1Q5T6R2 138 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 OR8G2PQ6IF36 304 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 Q8NA96 180 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 OR10G9Q8NGN4 311 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 OR10G7Q8NGN6 311 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 TECTBQ96PL2 329 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 CBY3A6NI87 242 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 NPPCP23582 126 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 ADMP35318 185 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 TPPP2P59282 170 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 ERRFI1Q9UJM3 462 aaPredicted RBP7.22□□□□□ -1.25
HPS4-206ENST00000439453 PAM16Q9Y3D7 125 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 COL12A1Q99715 3063 aa7.22□□□□□ -1.25
HPS4-206ENST00000439453 ZNF16P17020 682 aaPredicted RBP7.21□□□□□ -1.25
HPS4-206ENST00000439453 TMEM183BQ1AE95 376 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms