RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 SSX3Q99909 188 aa14.05□□□□□ -0.16
TTC3-209ENST00000438055 TMEM147Q9BVK8 224 aa14.05□□□□□ -0.16
TTC3-209ENST00000438055 TREM2Q9NZC2 230 aa14.05□□□□□ -0.16
TTC3-209ENST00000438055 LRRC30A6NM36 301 aa14.05□□□□□ -0.16
TTC3-209ENST00000438055 H7BYZ3 331 aa14.05□□□□□ -0.16
TTC3-209ENST00000438055 SOX15O60248 233 aa14.05□□□□□ -0.16
TTC3-209ENST00000438055 TFF3Q07654 80 aa14.05□□□□□ -0.16
TTC3-209ENST00000438055 INTS1Q8N201 2190 aaKnown RBP14.05□□□□□ -0.16
TTC3-209ENST00000438055 A0A087WWC5 75 aa14.05□□□□□ -0.16
TTC3-209ENST00000438055 IQCF6A8MYZ5 107 aa14.05□□□□□ -0.16
TTC3-209ENST00000438055 MEF2BQ02080 365 aaPredicted RBP14.05□□□□□ -0.16
TTC3-209ENST00000438055 PNRC1Q12796 327 aaPredicted RBP14.05□□□□□ -0.16
TTC3-209ENST00000438055 TMEM241Q24JQ0 296 aa14.05□□□□□ -0.16
TTC3-209ENST00000438055 C9orf152Q5JTZ5 239 aa14.05□□□□□ -0.16
TTC3-209ENST00000438055 Q6ZT83 130 aa14.05□□□□□ -0.16
TTC3-209ENST00000438055 GATAD1Q8WUU5 269 aa14.05□□□□□ -0.16
TTC3-209ENST00000438055 MALSU1Q96EH3 234 aa14.05□□□□□ -0.16
TTC3-209ENST00000438055 GGACTQ9BVM4 153 aa14.05□□□□□ -0.16
TTC3-209ENST00000438055 PCNX1Q96RV3 2341 aa14.05□□□□□ -0.16
TTC3-209ENST00000438055 IGHV3OR15-7A0A075B7D8 119 aa14.04□□□□□ -0.16
TTC3-209ENST00000438055 A0A1W2PPQ1 181 aa14.04□□□□□ -0.16
TTC3-209ENST00000438055 TMEM210A6NLX4 147 aa14.04□□□□□ -0.16
TTC3-209ENST00000438055 M0R1X1 148 aa14.04□□□□□ -0.16
TTC3-209ENST00000438055 HIST1H2BKO60814 126 aa14.04□□□□□ -0.16
TTC3-209ENST00000438055 HIST1H2BJP06899 126 aa14.04□□□□□ -0.16
TTC3-209ENST00000438055 HIST1H2BOP23527 126 aa14.04□□□□□ -0.16
TTC3-209ENST00000438055 HIST1H2BBP33778 126 aa14.04□□□□□ -0.16
TTC3-209ENST00000438055 HIST1H2BDP58876 126 aa14.04□□□□□ -0.16
TTC3-209ENST00000438055 HIST1H2BCP62807 126 aa14.04□□□□□ -0.16
TTC3-209ENST00000438055 HIST2H2BEQ16778 126 aa14.04□□□□□ -0.16
TTC3-209ENST00000438055 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.04□□□□□ -0.16
TTC3-209ENST00000438055 HIST1H2BHQ93079 126 aa14.04□□□□□ -0.16
TTC3-209ENST00000438055 HIST1H2BNQ99877 126 aa14.04□□□□□ -0.16
TTC3-209ENST00000438055 HIST1H2BMQ99879 126 aa14.04□□□□□ -0.16
TTC3-209ENST00000438055 ACTR3CQ9C0K3 210 aaPredicted RBP14.04□□□□□ -0.16
TTC3-209ENST00000438055 MBNL3Q9NUK0 354 aaKnown RBP14.04□□□□□ -0.16
TTC3-209ENST00000438055 CHD3Q12873 2000 aaKnown RBP14.04□□□□□ -0.16
TTC3-209ENST00000438055 A0A1W2PPV4 95 aa14.04□□□□□ -0.16
TTC3-209ENST00000438055 PAGE4O60829 102 aa14.04□□□□□ -0.16
TTC3-209ENST00000438055 CYB5R3P00387 301 aaPredicted RBP14.04□□□□□ -0.16
TTC3-209ENST00000438055 ACSM6Q6P461 480 aa14.04□□□□□ -0.16
TTC3-209ENST00000438055 NBEAQ8NFP9 2946 aa14.04□□□□□ -0.16
TTC3-209ENST00000438055 NPIPB11E5RHQ5 1161 aa14.04□□□□□ -0.16
TTC3-209ENST00000438055 TRGC1P0CF51 173 aa14.04□□□□□ -0.16
TTC3-209ENST00000438055 VKORC1L1Q8N0U8 176 aa14.04□□□□□ -0.16
TTC3-209ENST00000438055 OR4A16Q8NH70 328 aa14.04□□□□□ -0.16
TTC3-209ENST00000438055 CA5BP1Q8WTZ4 195 aa14.04□□□□□ -0.16
TTC3-209ENST00000438055 OPN3Q9H1Y3 402 aaPredicted RBP14.04□□□□□ -0.16
TTC3-209ENST00000438055 WIPI2Q9Y4P8 454 aa14.04□□□□□ -0.16
TTC3-209ENST00000438055 PLCE1Q9P212 2302 aa14.04□□□□□ -0.16
TTC3-209ENST00000438055 B4DEV8 164 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 CECR9P0C854 216 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 CDX1P47902 265 aaPredicted RBP14.03□□□□□ -0.16
TTC3-209ENST00000438055 ACP7Q6ZNF0 438 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 TRAV1-1A0A0B4J248 108 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 IGKV1D-33P01593 117 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 IGKV1-33P01594 117 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 HOXA5P20719 270 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 ZNF83P51522 516 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 FOXF2Q12947 444 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 BSXQ3C1V8 233 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 C9orf106Q8NAJ2 232 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 FRZBQ92765 325 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 R3HDM4Q96D70 268 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 COQ2Q96H96 371 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 OR51M1Q9H341 326 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 A0A0U1RQK1 487 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 SPAARA0A1B0GVQ0 90 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 CRYAAP02489 173 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 ERVK-16P61578 105 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 RTP5Q14D33 572 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 DEFB109BQ30KR1 87 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 DEFB124Q8NES8 71 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 DEFB108BQ8NET1 73 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 MBD3L1Q8WWY6 194 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 RAB24Q969Q5 203 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 CIB3Q96Q77 187 aaPredicted RBP14.03□□□□□ -0.16
TTC3-209ENST00000438055 TAAR6Q96RI8 345 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 SDF2L1Q9HCN8 221 aa14.03□□□□□ -0.16
TTC3-209ENST00000438055 DSPP15924 2871 aaKnown RBP14.02□□□□□ -0.16
TTC3-209ENST00000438055 CXorf65A6NEN9 183 aa14.02□□□□□ -0.16
TTC3-209ENST00000438055 MARCH11A6NNE9 402 aa14.02□□□□□ -0.16
TTC3-209ENST00000438055 EGR1P18146 543 aa14.02□□□□□ -0.16
TTC3-209ENST00000438055 WDR82Q6UXN9 313 aa14.02□□□□□ -0.16
TTC3-209ENST00000438055 SARAFQ96BY9 339 aa14.02□□□□□ -0.16
TTC3-209ENST00000438055 NAT8Q9UHE5 227 aa14.02□□□□□ -0.16
TTC3-209ENST00000438055 PKDREJQ9NTG1 2253 aa14.02□□□□□ -0.16
TTC3-209ENST00000438055 FAM90A26D6RGX4 464 aa14.02□□□□□ -0.17
TTC3-209ENST00000438055 C16orf82Q7Z2V1 217 aa14.02□□□□□ -0.17
TTC3-209ENST00000438055 ZBTB34Q8NCN2 500 aa14.02□□□□□ -0.17
TTC3-209ENST00000438055 ZDHHC11Q9H8X9 412 aa14.02□□□□□ -0.17
TTC3-209ENST00000438055 CTXND1A0A1B0GTU2 59 aa14.02□□□□□ -0.17
TTC3-209ENST00000438055 PDLIM3Q53GG5 364 aaPredicted RBP14.02□□□□□ -0.17
TTC3-209ENST00000438055 C1QL4Q86Z23 238 aa14.02□□□□□ -0.17
TTC3-209ENST00000438055 OR13D1Q8NGV5 346 aa14.02□□□□□ -0.17
TTC3-209ENST00000438055 C17orf112F2Z3M2 114 aa14.01□□□□□ -0.17
TTC3-209ENST00000438055 SLC35E4Q6ICL7 350 aa14.01□□□□□ -0.17
TTC3-209ENST00000438055 Q6ZR03 302 aa14.01□□□□□ -0.17
TTC3-209ENST00000438055 LEAP2Q969E1 77 aa14.01□□□□□ -0.17
TTC3-209ENST00000438055 SEBOXQ9HB31 216 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms