RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 BTNL3Q6UXE8 466 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 OR13D1Q8NGV5 346 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 R3HDM4Q96D70 268 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 AGMATQ9BSE5 352 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 CTDSP1Q9GZU7 261 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 MANBALQ9NQG1 85 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 CLN8Q9UBY8 286 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 METRNQ9UJH8 293 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 GAB2Q9UQC2 676 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 IGHV3-43A0A0B4J1X8 118 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 ZNF727A8MUV8 499 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 CLDN34H7C241 214 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 F2RL2O00254 374 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 ST8SIA5O15466 376 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 CYB5BO43169 146 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 ZG16O60844 167 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 RBMXL2O75526 392 aaKnown RBP8.69□□□□□ -1.02
CD44-210ENST00000434472 WISP2O76076 250 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 CRYAAP02489 173 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 IGHV3-43DP0DP04 118 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 GLRXP35754 106 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 FGF8P55075 233 aaPredicted RBP8.69□□□□□ -1.02
CD44-210ENST00000434472 KLF3P57682 345 aaPredicted RBP8.69□□□□□ -1.02
CD44-210ENST00000434472 BRWD1-AS2P59051 145 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 ERVK-16P61578 105 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 FABP9Q0Z7S8 132 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 KIAA0141Q14154 515 aaPredicted RBP8.69□□□□□ -1.02
CD44-210ENST00000434472 EDDM3AQ14507 147 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 ELOBQ15370 118 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 C1orf185Q5T7R7 199 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 GCSAMQ8N6F7 178 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 SDF2L1Q9HCN8 221 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 OR6C3Q9NZP0 311 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 GNG12Q9UBI6 72 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 NAT8Q9UHE5 227 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 IGKV1D-17A0A075B6S4 117 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 A0A1W2PPE3 182 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 MARCH11A6NNE9 402 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 LINC00473A8K010 186 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 TMEM250H0YL14 139 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 M0R1B8 84 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 EGR1P18146 543 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 DUTP33316 252 aaKnown RBP8.68□□□□□ -1.02
CD44-210ENST00000434472 RAB7AP51149 207 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 ZNF83P51522 516 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 RND2P52198 227 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 SELENOVP59797 346 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 OR2B8PP59922 312 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 SPCS3P61009 180 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 ZNF674Q2M3X9 581 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 ACOT6Q3I5F7 207 aaPredicted RBP8.68□□□□□ -1.02
CD44-210ENST00000434472 MORN2Q502X0 79 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 FFAR4Q5NUL3 377 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 SSX7Q7RTT5 188 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 C1orf87Q8N0U7 546 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 TPRX1Q8N7U7 411 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 OR10G9Q8NGN4 311 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 OR10G7Q8NGN6 311 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 OR52E5Q8NH55 327 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 RFESDQ8TAC1 157 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 Q8WTZ3 238 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 S100PBPQ96BU1 408 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 MEGF10Q96KG7 1140 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 ZNF251Q9BRH9 671 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 GGACTQ9BVM4 153 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 DUSP13Q9UII6 198 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 PCNX2A6NKB5 2137 aa8.68□□□□□ -1.02
CD44-210ENST00000434472 MPDU1O75352 247 aa8.67□□□□□ -1.02
CD44-210ENST00000434472 CRYABP02511 175 aaKnown RBP8.67□□□□□ -1.02
CD44-210ENST00000434472 OPN1MWP04001 364 aa8.67□□□□□ -1.02
CD44-210ENST00000434472 TFF1P04155 84 aa8.67□□□□□ -1.02
CD44-210ENST00000434472 OPN1MW2P0DN77 364 aa8.67□□□□□ -1.02
CD44-210ENST00000434472 OPN1MW3P0DN78 364 aa8.67□□□□□ -1.02
CD44-210ENST00000434472 NQO2P16083 231 aa8.67□□□□□ -1.02
CD44-210ENST00000434472 TMEM30BQ3MIR4 351 aa8.67□□□□□ -1.02
CD44-210ENST00000434472 PRAMEF5Q5TYX0 476 aa8.67□□□□□ -1.02
CD44-210ENST00000434472 NCR3LG1Q68D85 454 aa8.67□□□□□ -1.02
CD44-210ENST00000434472 ACSM6Q6P461 480 aa8.67□□□□□ -1.02
CD44-210ENST00000434472 FAM180AQ6UWF9 173 aa8.67□□□□□ -1.02
CD44-210ENST00000434472 SEM1Q6ZVN7 128 aa8.67□□□□□ -1.02
CD44-210ENST00000434472 RPP25LQ8N5L8 163 aaKnown RBP8.67□□□□□ -1.02
CD44-210ENST00000434472 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.67□□□□□ -1.02
CD44-210ENST00000434472 OR4A16Q8NH70 328 aa8.67□□□□□ -1.02
CD44-210ENST00000434472 TMPRSS5Q9H3S3 457 aa8.67□□□□□ -1.02
CD44-210ENST00000434472 DOCK7Q96N67 2140 aa8.67□□□□□ -1.02
CD44-210ENST00000434472 SPEGQ15772 3267 aa8.66□□□□□ -1.02
CD44-210ENST00000434472 IGLV3-9A0A075B6K5 115 aa8.66□□□□□ -1.02
CD44-210ENST00000434472 DEFB108AA8MXU0 73 aa8.66□□□□□ -1.02
CD44-210ENST00000434472 M0R1X1 148 aa8.66□□□□□ -1.02
CD44-210ENST00000434472 FCGR3BO75015 233 aa8.66□□□□□ -1.02
CD44-210ENST00000434472 HOXA5P20719 270 aa8.66□□□□□ -1.02
CD44-210ENST00000434472 MDKP21741 143 aaPredicted RBP8.66□□□□□ -1.02
CD44-210ENST00000434472 TIMP3P35625 211 aa8.66□□□□□ -1.02
CD44-210ENST00000434472 NKX6-1P78426 367 aaPredicted RBP8.66□□□□□ -1.02
CD44-210ENST00000434472 MEF2BQ02080 365 aaPredicted RBP8.66□□□□□ -1.02
CD44-210ENST00000434472 TMEM241Q24JQ0 296 aa8.66□□□□□ -1.02
CD44-210ENST00000434472 PDLIM3Q53GG5 364 aaPredicted RBP8.66□□□□□ -1.02
CD44-210ENST00000434472 FAM53AQ6NSI3 398 aaPredicted RBP8.66□□□□□ -1.02
CD44-210ENST00000434472 Q6ZS92 163 aa8.66□□□□□ -1.02
CD44-210ENST00000434472 CYP2G1PQ6ZSU1 146 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms