RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 ZNF385AQ96PM9 386 aaKnown RBP6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 FOXB1Q99853 325 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 DEFB127Q9H1M4 99 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 C12orf49Q9H741 205 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 UQCR10Q9UDW1 63 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 KLF13Q9Y2Y9 288 aaPredicted RBP6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 TRIOO75962 3097 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 ZNF253O75346 499 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 PGLYRP1O75594 196 aaPredicted RBP6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 MGST1P10620 155 aaKnown RBP6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 FUT6P51993 359 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 RBM11P57052 281 aaKnown RBP6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 ARL16Q0P5N6 197 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 OR1C1Q15619 314 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 HES3Q5TGS1 186 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 VHLLQ6RSH7 139 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 TMPRSS7Q7RTY8 843 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 ZNF808Q8N4W9 903 aaPredicted RBP6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 CNEP1R1Q8N9A8 125 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 MBD3L1Q8WWY6 194 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 FAM173AQ9BQD7 235 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 MRPL13Q9BYD1 178 aaKnown RBP6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 WDR61Q9GZS3 305 aaKnown RBP6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 LAMTOR2Q9Y2Q5 125 aa6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 NCOA6Q14686 2063 aaPredicted RBP6.32□□□□□ -1.4
SYNPO2-203ENST00000434046 DNAJC13O75165 2243 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 A0A0G2JRQ6 117 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 A0A0J9YW62 118 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 NAPSAO96009 420 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 COX6A1P12074 109 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 RAC2P15153 192 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 GPM6AP51674 278 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 ZNF816Q0VGE8 651 aaPredicted RBP6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 HLA-DRB5Q30154 266 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 COA6Q5JTJ3 125 aaKnown RBP6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 TCTEX1D1Q8N7M0 179 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 ZNF441Q8N8Z8 693 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 TMEM56Q96MV1 263 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 CLN8Q9UBY8 286 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 TRAPPC2LQ9UL33 140 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 TMEM56-RWDD3S4R434 201 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 IGKV1-12A0A0C4DH73 117 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 C17orf112F2Z3M2 114 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 SLC17A3O00476 420 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 IGKV1D-12P01611 117 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 UCP1P25874 307 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 LRRC75BQ2VPJ9 315 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 PHYHD1Q5SRE7 291 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 MRPL14Q6P1L8 145 aaKnown RBP6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 Q6ZWC4 215 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 ABHD14BQ96IU4 210 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 GAL3ST2Q9H3Q3 398 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 TAAR3PQ9P1P4 343 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 LAMA1P25391 3075 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 CHD9Q3L8U1 2897 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 IGKV1-27A0A075B6S5 117 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 TRAV38-1A0A0B4J264 116 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 PIGBOS1A0A0B4J2F0 54 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 ANKRD30BLA7E2S9 258 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 H0Y8G0 127 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 H0Y980 276 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 CTXN2P0C2S0 81 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 ZNF32P17041 273 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 BCL3P20749 454 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 CCL1P22362 96 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 CEACAM8P31997 349 aaPredicted RBP6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 ATP5G3P48201 142 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 LCN2P80188 198 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 NMSQ5H8A3 153 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 STPG4Q8N801 248 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 PLPPR1Q8TBJ4 325 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 PRUNE2Q8WUY3 3088 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 SIGLEC12Q96PQ1 595 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 UHRF2Q96PU4 802 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 PSMG3Q9BT73 122 aaPredicted RBP6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 DERL1Q9BUN8 251 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 WNT5BQ9H1J7 359 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 GPR35Q9HC97 309 aa6.31□□□□□ -1.4
SYNPO2-203ENST00000434046 MUC22E2RYF6 1773 aaPredicted RBP6.3□□□□□ -1.4
SYNPO2-203ENST00000434046 IL6RP08887 468 aaPredicted RBP6.3□□□□□ -1.4
SYNPO2-203ENST00000434046 PAX9P55771 341 aa6.3□□□□□ -1.4
SYNPO2-203ENST00000434046 KLF3P57682 345 aaPredicted RBP6.3□□□□□ -1.4
SYNPO2-203ENST00000434046 OR1F12Q8NHA8 337 aa6.3□□□□□ -1.4
SYNPO2-203ENST00000434046 PNRC2Q9NPJ4 139 aaKnown RBP6.3□□□□□ -1.4
SYNPO2-203ENST00000434046 SLC35D1Q9NTN3 355 aa6.3□□□□□ -1.4
SYNPO2-203ENST00000434046 TBL2Q9Y4P3 447 aaKnown RBP6.3□□□□□ -1.4
SYNPO2-203ENST00000434046 EFNA2O43921 213 aa6.3□□□□□ -1.4
SYNPO2-203ENST00000434046 PAX1P15863 534 aa6.3□□□□□ -1.4
SYNPO2-203ENST00000434046 SOX8P57073 446 aa6.3□□□□□ -1.4
SYNPO2-203ENST00000434046 Q56UQ5 140 aa6.3□□□□□ -1.4
SYNPO2-203ENST00000434046 ACSM6Q6P461 480 aa6.3□□□□□ -1.4
SYNPO2-203ENST00000434046 FAM19A2Q8N3H0 131 aa6.3□□□□□ -1.4
SYNPO2-203ENST00000434046 SFRP2Q96HF1 295 aa6.3□□□□□ -1.4
SYNPO2-203ENST00000434046 C20orf144Q9BQM9 153 aa6.3□□□□□ -1.4
SYNPO2-203ENST00000434046 DECR2Q9NUI1 292 aa6.3□□□□□ -1.4
SYNPO2-203ENST00000434046 FOXI3A8MTJ6 420 aaPredicted RBP6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 SP9P0CG40 484 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 OR8B8Q15620 311 aa6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 MRPL54Q6P161 138 aaKnown RBP6.29□□□□□ -1.4
SYNPO2-203ENST00000434046 ZNF837Q96EG3 531 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms