RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 FOXA1P55317 472 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 DEFA3P59666 94 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 NAA20P61599 178 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 RANP62826 216 aaKnown RBP1.4□□□□□ -2.19
PTPN4-205ENST00000433888 RPS24P62847 133 aaKnown RBP1.4□□□□□ -2.19
PTPN4-205ENST00000433888 FADDQ13158 208 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 DHRS2Q13268 280 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 IHHQ14623 411 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 N4BP2L1Q5TBK1 243 aaPredicted RBP1.4□□□□□ -2.19
PTPN4-205ENST00000433888 UMODL1-AS1Q8N2C9 162 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 ZFAND2AQ8N6M9 145 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 UBL4BQ8N7F7 174 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 LY6G5BQ8NDX9 201 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 OR1M1Q8NGA1 313 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 OR5B17Q8NGF7 314 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 RPS4Y2Q8TD47 263 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 C12orf43Q96C57 262 aaKnown RBP1.4□□□□□ -2.19
PTPN4-205ENST00000433888 STACQ99469 402 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 TTTY13Q9BZ97 58 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 DUSP21Q9H596 190 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 ANAPC10Q9UM13 185 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 MINOS1-NBL1R4GNA1 71 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 SHANK3Q9BYB0 1731 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 IGHV3OR15-7A0A075B7D8 119 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 SMIM23A6NLE4 172 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 TMEM210A6NLX4 147 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 A8MWP6 167 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 C15orf65H3BRN8 121 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 H3BSA7 217 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 M0R036 132 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 IFNA6P05013 189 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 TSPEAR-AS2P59090 65 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 SPCS3P61009 180 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 MAGOHP61326 146 aaKnown RBP1.39□□□□□ -2.19
PTPN4-205ENST00000433888 REEP5Q00765 189 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 FLI1Q01543 452 aaPredicted RBP1.39□□□□□ -2.19
PTPN4-205ENST00000433888 IFITM2Q01629 132 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 HTR4Q13639 388 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 ACSBG2Q5FVE4 666 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 RASL11AQ6T310 242 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 SBSNQ6UWP8 590 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 ALKAL1Q6UXT8 129 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 SPATA12Q7Z6I5 190 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 SLC35F6Q8N357 371 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 TMEM86BQ8N661 226 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 OR10D4PQ8NGN7 298 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 OR51H1Q8NH63 302 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 OR5P3Q8WZ94 311 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 YIPF5Q969M3 257 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 CHMP6Q96FZ7 201 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 SFRP2Q96HF1 295 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 OR8B2Q96RD0 313 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 MGLLQ99685 303 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 PSTPIP2Q9H939 334 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.39□□□□□ -2.19
PTPN4-205ENST00000433888 EMC3Q9P0I2 261 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 LSM5Q9Y4Y9 91 aaKnown RBP1.39□□□□□ -2.19
PTPN4-205ENST00000433888 DSCAML1Q8TD84 2053 aa1.39□□□□□ -2.19
PTPN4-205ENST00000433888 TMEM269A0A1B0GVZ9 245 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 OR6C6A6NF89 314 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 SMIM9A6NGZ8 99 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 CLDN24A6NM45 220 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 C17orf98A8MV24 154 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 EEF1E1-BLOC1S5C9J1V9 151 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 GOLGA6L19H0YKK7 550 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 COX7A2LO14548 114 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 UBE2L6O14933 153 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 DCTN3O75935 186 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 LY6HO94772 140 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 IGLV3-27P01718 113 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 CTXN2P0C2S0 81 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 FGF6P10767 208 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 SLC25A16P16260 332 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 BTN3A2P78410 334 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 RUNX1Q01196 453 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 FOXF1Q12946 379 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 OR2F1Q13607 317 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 TAF1AQ15573 450 aaPredicted RBP1.38□□□□□ -2.19
PTPN4-205ENST00000433888 MRPL51Q4U2R6 128 aaKnown RBP1.38□□□□□ -2.19
PTPN4-205ENST00000433888 NIT1Q86X76 327 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 CLDN22Q8N7P3 220 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 Q8NAQ8 132 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 BPIFB6Q8NFQ5 453 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 OR11H1Q8NG94 326 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 OR10A6Q8NH74 314 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 C16orf78Q8WTQ4 265 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 FGF13Q92913 245 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 PYURFQ96I23 114 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 TBX5Q99593 518 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 LRRC19Q9H756 370 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 HES4Q9HCC6 221 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 UBQLN4Q9NRR5 601 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 SNX12Q9UMY4 172 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 ADAMTSL1Q8N6G6 1762 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 C9orf84Q5VXU9 1444 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 SSH2Q76I76 1423 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 CEP170Q5SW79 1584 aa1.38□□□□□ -2.19
PTPN4-205ENST00000433888 CCDC88AQ3V6T2 1871 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 HECW1Q76N89 1606 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 TRPM6Q9BX84 2022 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms