RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 KRTCAP3Q53RY4 240 aa9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 UNQ5815/PRO19632Q6UWF5 114 aa9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 TMEM14EPQ6UXP3 125 aa9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 APH1AQ96BI3 265 aa9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 LIN7CQ9NUP9 197 aaKnown RBP9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 RNF24Q9Y225 148 aa9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 TBL2Q9Y4P3 447 aaKnown RBP9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 FRYQ5TBA9 3013 aa9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 TRBV20OR9-2A0A075B6H5 130 aa9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 SCO2A0A1W2PP80 73 aa9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 HTD2P86397 168 aa9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 FADS6Q8N9I5 356 aa9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 TIMM9Q9Y5J7 89 aa9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 FAM186AA6NE01 2351 aa9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 DEGS1O15121 323 aa9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 PDE6DO43924 150 aa9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 ZIC3O60481 467 aa9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 PIAS2O75928 621 aa9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 IGHEP01854 428 aa9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 CEACAM8P31997 349 aaPredicted RBP9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 VEGFBP49765 207 aa9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 HLA-DRB5Q30154 266 aa9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 Q6ZS49 121 aa9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 APOBEC3DQ96AK3 386 aaPredicted RBP9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 LRFN3Q9BTN0 628 aa9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 LAMTOR2Q9Y2Q5 125 aa9.75□□□□□ -0.85
HMGCS1-202ENST00000433297 NDUFB8O95169 186 aa9.74□□□□□ -0.85
HMGCS1-202ENST00000433297 IGLV2-14P01704 120 aa9.74□□□□□ -0.85
HMGCS1-202ENST00000433297 COL8A2P25067 703 aa9.74□□□□□ -0.85
HMGCS1-202ENST00000433297 FKBP2P26885 142 aaKnown RBP9.74□□□□□ -0.85
HMGCS1-202ENST00000433297 FAM53AQ6NSI3 398 aaPredicted RBP9.74□□□□□ -0.85
HMGCS1-202ENST00000433297 REPIN1Q9BWE0 567 aaKnown RBP9.74□□□□□ -0.85
HMGCS1-202ENST00000433297 NAT8BQ9UHF3 227 aa9.74□□□□□ -0.85
HMGCS1-202ENST00000433297 TRAV24A0A0B4J272 114 aa9.74□□□□□ -0.85
HMGCS1-202ENST00000433297 C17orf112F2Z3M2 114 aa9.74□□□□□ -0.85
HMGCS1-202ENST00000433297 FAM19A2Q8N3H0 131 aa9.74□□□□□ -0.85
HMGCS1-202ENST00000433297 DRAM1Q8N682 238 aa9.74□□□□□ -0.85
HMGCS1-202ENST00000433297 OR4B1Q8NGF8 309 aa9.74□□□□□ -0.85
HMGCS1-202ENST00000433297 ZNF391Q9UJN7 358 aa9.74□□□□□ -0.85
HMGCS1-202ENST00000433297 FRYLO94915 3013 aa9.74□□□□□ -0.85
HMGCS1-202ENST00000433297 PIGBOS1A0A0B4J2F0 54 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 CBY3A6NI87 242 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 SYNGR4O95473 234 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 TCL1AP56279 114 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 TSTD1Q8NFU3 115 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 QTRT1Q9BXR0 403 aaKnown RBP9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 PCED1AQ9H1Q7 454 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 NRN1Q9NPD7 142 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 DLL3Q9NYJ7 618 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 RHBDL1O75783 438 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 NGFP01138 241 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 CA6P23280 308 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 TIMP3P35625 211 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 LINC00205P59089 165 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 YPEL3P61236 119 aaPredicted RBP9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 PCBD1P61457 104 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 RBX1P62877 108 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 MRPL52Q86TS9 123 aaKnown RBP9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 OR8I2Q8N0Y5 310 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 CPT1CQ8TCG5 803 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 ZNF703Q9H7S9 590 aaPredicted RBP9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 GNB4Q9HAV0 340 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 DEPPQ9NTK1 212 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 UQCR10Q9UDW1 63 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 VPS13AQ96RL7 3174 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 ODAMA1E959 279 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 FAM90A10PA6NDY2 464 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 FAM90A18PA6NE21 464 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 FAM90A16PA6NEW6 464 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 EPOPA6NHQ4 379 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 FAM90A20PA6NIJ5 464 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 FAM90A8PA6NJQ4 464 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 FAM90A7PA6NKC0 464 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 FAM90A22PA8MWA6 464 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 FAM90A12PA8MX19 464 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 FAM90A5PA8MXJ8 464 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 FAM90A23PA8MXZ1 464 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 FAM90A15PP0C7V4 464 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 FAM90A13PP0C7W8 464 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 FAM90A14PP0C7W9 464 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 FAM90A24PP0C7X0 464 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 TDGF1P13385 188 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 COMPP49747 757 aaPredicted RBP9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 MAJINQ3KP22 176 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 SAPCD1Q5SSQ6 148 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 BRWD1Q9NSI6 2320 aa9.73□□□□□ -0.85
HMGCS1-202ENST00000433297 ZNF253O75346 499 aa9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 HYPMO75409 117 aa9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 ARL14EPLP0DKL9 152 aa9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 CD99P14209 185 aa9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 LIFP15018 202 aa9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 S100A7P31151 101 aa9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 DSCR4P56555 118 aaPredicted RBP9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 HYAL1Q12794 435 aa9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 CEACAM21Q3KPI0 293 aa9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 C17orf82Q86X59 251 aaPredicted RBP9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 FAM58AQ8N1B3 248 aa9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 ABHD3Q8WU67 409 aa9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 RNF138Q8WVD3 245 aa9.72□□□□□ -0.85
HMGCS1-202ENST00000433297 CCDC74BQ96LY2 380 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms