RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 IL2RGP31785 369 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 MEOX1P50221 254 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 RND2P52198 227 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 RPL23P62829 140 aaKnown RBP6□□□□□ -1.45
COL28A1-202ENST00000430711 GNG3P63215 75 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 TLE4Q04727 773 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 PSG7Q13046 419 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 EIF4EBP1Q13541 118 aaPredicted RBP6□□□□□ -1.45
COL28A1-202ENST00000430711 MSMPQ1L6U9 139 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 MRGPRDQ8TDS7 321 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 MBD3L1Q8WWY6 194 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 BCL2L2Q92843 193 aaPredicted RBP6□□□□□ -1.45
COL28A1-202ENST00000430711 PCGF1Q9BSM1 259 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 FAM234AQ9H0X4 552 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 CDH20Q9HBT6 801 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 TMEM9BQ9NQ34 198 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 INTS1Q8N201 2190 aaKnown RBP6□□□□□ -1.45
COL28A1-202ENST00000430711 ZFYVE26Q68DK2 2539 aa6□□□□□ -1.45
COL28A1-202ENST00000430711 TRBV6-6A0A0A6YYG2 114 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 TRAV3A0A0B4J244 114 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 TRAV1-1A0A0B4J248 108 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 TRAV38-1A0A0B4J264 116 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 OR5H1A6NKK0 313 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 ZNF729A6NN14 1252 aaPredicted RBP5.99□□□□□ -1.45
COL28A1-202ENST00000430711 ANKRD30BLA7E2S9 258 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 ST8SIA5O15466 376 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 ZNF737O75373 536 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 CYB5R3P00387 301 aaPredicted RBP5.99□□□□□ -1.45
COL28A1-202ENST00000430711 IFNA5P01569 189 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 AMBPP02760 352 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 PFN1P07737 140 aaKnown RBP5.99□□□□□ -1.45
COL28A1-202ENST00000430711 HNF1AP20823 631 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 ATP5G3P48201 142 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 FAM3BP58499 235 aaPredicted RBP5.99□□□□□ -1.45
COL28A1-202ENST00000430711 UBE2G2P60604 165 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 TNFRSF9Q07011 255 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 SSPNQ14714 243 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 DCAF10Q5QP82 559 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 TMEM14EPQ6UXP3 125 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 ZNF600Q6ZNG1 722 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 OR13A1Q8NGR1 328 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 SLC25A40Q8TBP6 338 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 LHX4Q969G2 390 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 SMIM7Q9BQ49 75 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 FAM173AQ9BQD7 235 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 PARLQ9H300 379 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 MSL2Q9HCI7 577 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 BOKQ9UMX3 212 aaPredicted RBP5.99□□□□□ -1.45
COL28A1-202ENST00000430711 LAMP3Q9UQV4 416 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 HEATR1Q9H583 2144 aaKnown RBP5.99□□□□□ -1.45
COL28A1-202ENST00000430711 TRBV20OR9-2A0A075B6H5 130 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 BTBD17A6NE02 478 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 J3QT63 122 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 PAGE4O60829 102 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 OR9G9P0C7N8 305 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 SELLP14151 372 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 HIST1H1BP16401 226 aaKnown RBP5.99□□□□□ -1.45
COL28A1-202ENST00000430711 NDUFB7P17568 137 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 WT1P19544 449 aaPredicted RBP5.99□□□□□ -1.45
COL28A1-202ENST00000430711 IGHV1-2P23083 117 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 NKX6-1P78426 367 aaPredicted RBP5.99□□□□□ -1.45
COL28A1-202ENST00000430711 PLGLB1Q02325 96 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 SRSF7Q16629 238 aaKnown RBP eCLIP5.99□□□□□ -1.45
COL28A1-202ENST00000430711 TMEM41BQ5BJD5 291 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 ZNF766Q5HY98 468 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 SSX9Q7RTT3 188 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 TCF23Q7RTU1 214 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 TMEM170AQ8WVE7 144 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 LEAP2Q969E1 77 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 IL22RA2Q969J5 263 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 PACRGQ96M98 296 aaPredicted RBP5.99□□□□□ -1.45
COL28A1-202ENST00000430711 TECTBQ96PL2 329 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 RAB40CQ96S21 281 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 PARD6AQ9NPB6 346 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 GFOD1Q9NXC2 390 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 TREM2Q9NZC2 230 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 SPTBN2O15020 2390 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 TNCP24821 2201 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 NAV2Q8IVL1 2488 aa5.99□□□□□ -1.45
COL28A1-202ENST00000430711 DUXBA0A1W2PPF3 345 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 A0A1W2PPQ1 181 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 LNP1A1A4G5 178 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 CLDN34H7C241 214 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 RRHO14718 337 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 PPP1R2P9O14990 202 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 NXPH2O95156 264 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 S100A2P29034 98 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 CHRNA7P36544 502 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 TRA2AQ13595 282 aaKnown RBP eCLIP5.98□□□□□ -1.45
COL28A1-202ENST00000430711 OR8G1Q15617 311 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 SSX2Q16385 188 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 ABHD17BQ5VST6 288 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 PEAR1Q5VY43 1037 aaPredicted RBP5.98□□□□□ -1.45
COL28A1-202ENST00000430711 DUX4L9Q6RFH8 374 aaPredicted RBP5.98□□□□□ -1.45
COL28A1-202ENST00000430711 ZNF573Q86YE8 665 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 C1orf87Q8N0U7 546 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 SCGB1C1Q8TD33 95 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 C1orf159Q96HA4 380 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 HIST1H2AAQ96QV6 131 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 QTRT1Q9BXR0 403 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms