RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	PDPN	Q86YL7	162 aa		13.74	□□□□□ -0.21
MRPL28-203	ENST00000429738	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	13.74	□□□□□ -0.21
MRPL28-203	ENST00000429738	OR1N2	Q8NGR9	330 aa		13.74	□□□□□ -0.21
MRPL28-203	ENST00000429738	FOXA2	Q9Y261	457 aa	Predicted RBP	13.74	□□□□□ -0.21
MRPL28-203	ENST00000429738	TRBV6-7	A0A0A0MS04	114 aa		13.73	□□□□□ -0.21
MRPL28-203	ENST00000429738	HIST1H1D	P16402	221 aa	Known RBP	13.73	□□□□□ -0.21
MRPL28-203	ENST00000429738	GNB3	P16520	340 aa		13.73	□□□□□ -0.21
MRPL28-203	ENST00000429738	AKIRIN2	Q53H80	203 aa		13.73	□□□□□ -0.21
MRPL28-203	ENST00000429738	IGSF11	Q5DX21	431 aa		13.73	□□□□□ -0.21
MRPL28-203	ENST00000429738	TPSG1	Q9NRR2	321 aa		13.73	□□□□□ -0.21
MRPL28-203	ENST00000429738	METTL1	Q9UBP6	276 aa	Known RBP	13.73	□□□□□ -0.21
MRPL28-203	ENST00000429738	SORL1	Q92673	2214 aa		13.72	□□□□□ -0.21
MRPL28-203	ENST00000429738		A0A0B4J203	849 aa		13.72	□□□□□ -0.21
MRPL28-203	ENST00000429738	GSTT2	P0CG29	244 aa		13.72	□□□□□ -0.21
MRPL28-203	ENST00000429738	GSTT2B	P0CG30	244 aa		13.72	□□□□□ -0.21
MRPL28-203	ENST00000429738	GADD45A	P24522	165 aa		13.72	□□□□□ -0.21
MRPL28-203	ENST00000429738	MRPS15	P82914	257 aa	Known RBP	13.72	□□□□□ -0.21
MRPL28-203	ENST00000429738	TMEM267	Q0VDI3	215 aa	Predicted RBP	13.72	□□□□□ -0.21
MRPL28-203	ENST00000429738	SRSF7	Q16629	238 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
MRPL28-203	ENST00000429738	C22orf42	Q6IC83	251 aa		13.72	□□□□□ -0.21
MRPL28-203	ENST00000429738	PYHIN1	Q6K0P9	492 aa		13.72	□□□□□ -0.21
MRPL28-203	ENST00000429738		Q6ZS49	121 aa		13.72	□□□□□ -0.21
MRPL28-203	ENST00000429738	SPART	Q8N0X7	666 aa		13.72	□□□□□ -0.21
MRPL28-203	ENST00000429738	C5orf30	Q96GV9	206 aa		13.72	□□□□□ -0.21
MRPL28-203	ENST00000429738	OR5B12	Q96R08	314 aa		13.72	□□□□□ -0.21
MRPL28-203	ENST00000429738	TSNAX	Q99598	290 aa	Known RBP	13.72	□□□□□ -0.21
MRPL28-203	ENST00000429738	ASCL2	Q99929	193 aa		13.72	□□□□□ -0.21
MRPL28-203	ENST00000429738	ATP6V1G2	O95670	118 aa		13.71	□□□□□ -0.21
MRPL28-203	ENST00000429738	CA2	P00918	260 aa		13.71	□□□□□ -0.21
MRPL28-203	ENST00000429738	APOA2	P02652	100 aa		13.71	□□□□□ -0.21
MRPL28-203	ENST00000429738	FGF9	P31371	208 aa	Predicted RBP	13.71	□□□□□ -0.21
MRPL28-203	ENST00000429738	INSL3	P51460	131 aa		13.71	□□□□□ -0.21
MRPL28-203	ENST00000429738	RPS16	P62249	146 aa	Known RBP	13.71	□□□□□ -0.21
MRPL28-203	ENST00000429738	ZNF260	Q3ZCT1	412 aa		13.71	□□□□□ -0.21
MRPL28-203	ENST00000429738	PPP1R27	Q86WC6	154 aa		13.71	□□□□□ -0.21
MRPL28-203	ENST00000429738	LFNG	Q8NES3	379 aa		13.71	□□□□□ -0.21
MRPL28-203	ENST00000429738	OR10J5	Q8NHC4	309 aa		13.71	□□□□□ -0.21
MRPL28-203	ENST00000429738	FLYWCH2	Q96CP2	140 aa	Known RBP	13.71	□□□□□ -0.21
MRPL28-203	ENST00000429738	PRR25	Q96S07	402 aa		13.71	□□□□□ -0.21
MRPL28-203	ENST00000429738	CLCC1	Q96S66	551 aa		13.71	□□□□□ -0.21
MRPL28-203	ENST00000429738	FAM103A1	Q9BTL3	118 aa	Known RBP	13.71	□□□□□ -0.21
MRPL28-203	ENST00000429738	ALX4	Q9H161	411 aa	Predicted RBP	13.71	□□□□□ -0.21
MRPL28-203	ENST00000429738	OR2D2	Q9H210	308 aa		13.71	□□□□□ -0.21
MRPL28-203	ENST00000429738	SLC35D1	Q9NTN3	355 aa		13.71	□□□□□ -0.21
MRPL28-203	ENST00000429738	SDHAF2	Q9NX18	166 aa		13.71	□□□□□ -0.21
MRPL28-203	ENST00000429738	ZNF230	Q9UIE0	474 aa	Predicted RBP	13.71	□□□□□ -0.21
MRPL28-203	ENST00000429738	A3GALT2	U3KPV4	340 aa		13.71	□□□□□ -0.21
MRPL28-203	ENST00000429738	METTL21EP	A6NDL7	271 aa		13.7	□□□□□ -0.22
MRPL28-203	ENST00000429738		M0R1X1	148 aa		13.7	□□□□□ -0.22
MRPL28-203	ENST00000429738	BET1	O15155	118 aa		13.7	□□□□□ -0.22
MRPL28-203	ENST00000429738	IGLV2-23	P01705	113 aa		13.7	□□□□□ -0.22
MRPL28-203	ENST00000429738	CRYGB	P07316	175 aa		13.7	□□□□□ -0.22
MRPL28-203	ENST00000429738	LGALS1	P09382	135 aa	Known RBP	13.7	□□□□□ -0.22
MRPL28-203	ENST00000429738	OR8U9	P0C7N5	309 aa		13.7	□□□□□ -0.22
MRPL28-203	ENST00000429738	SSBP2	P81877	361 aa	Predicted RBP	13.7	□□□□□ -0.22
MRPL28-203	ENST00000429738	ACTBL2	Q562R1	376 aa		13.7	□□□□□ -0.22
MRPL28-203	ENST00000429738	CASC10	Q5T4H9	136 aa		13.7	□□□□□ -0.22
MRPL28-203	ENST00000429738	CASTOR1	Q8WTX7	329 aa		13.7	□□□□□ -0.22
MRPL28-203	ENST00000429738	TXNL4B	Q9NX01	149 aa	Known RBP	13.7	□□□□□ -0.22
MRPL28-203	ENST00000429738	ARPC1B	O15143	372 aa	Known RBP	13.69	□□□□□ -0.22
MRPL28-203	ENST00000429738	SLC25A17	O43808	307 aa		13.69	□□□□□ -0.22
MRPL28-203	ENST00000429738	ECI1	P42126	302 aa		13.69	□□□□□ -0.22
MRPL28-203	ENST00000429738	UNQ5815/PRO19632	Q6UWF5	114 aa		13.69	□□□□□ -0.22
MRPL28-203	ENST00000429738	MUC7	Q8TAX7	377 aa		13.69	□□□□□ -0.22
MRPL28-203	ENST00000429738	ABHD5	Q8WTS1	349 aa		13.69	□□□□□ -0.22
MRPL28-203	ENST00000429738	MAFIP	Q8WZ33	124 aa		13.69	□□□□□ -0.22
MRPL28-203	ENST00000429738	DCUN1D4	Q92564	292 aa		13.69	□□□□□ -0.22
MRPL28-203	ENST00000429738	FCGR1B	Q92637	280 aa		13.69	□□□□□ -0.22
MRPL28-203	ENST00000429738	ARPC1A	Q92747	370 aa		13.69	□□□□□ -0.22
MRPL28-203	ENST00000429738	CENPO	Q9BU64	300 aa		13.69	□□□□□ -0.22
MRPL28-203	ENST00000429738	BIRC6	Q9NR09	4857 aa		13.69	□□□□□ -0.22
MRPL28-203	ENST00000429738	TNC	P24821	2201 aa		13.68	□□□□□ -0.22
MRPL28-203	ENST00000429738		A0A075B6Q4	140 aa		13.68	□□□□□ -0.22
MRPL28-203	ENST00000429738	IGKV1D-8	A0A087WSZ0	117 aa		13.68	□□□□□ -0.22
MRPL28-203	ENST00000429738	NOTO	A8MTQ0	251 aa		13.68	□□□□□ -0.22
MRPL28-203	ENST00000429738	LINC01619	G3V211	115 aa		13.68	□□□□□ -0.22
MRPL28-203	ENST00000429738	OVOL1	O14753	267 aa		13.68	□□□□□ -0.22
MRPL28-203	ENST00000429738	DTYMK	P23919	212 aa		13.68	□□□□□ -0.22
MRPL28-203	ENST00000429738	LGALS7	P47929	136 aa		13.68	□□□□□ -0.22
MRPL28-203	ENST00000429738	TAGLN	Q01995	201 aa	Known RBP	13.68	□□□□□ -0.22
MRPL28-203	ENST00000429738	ARL6IP1	Q15041	203 aa		13.68	□□□□□ -0.22
MRPL28-203	ENST00000429738	H1FOO	Q8IZA3	346 aa	Predicted RBP	13.68	□□□□□ -0.22
MRPL28-203	ENST00000429738	DLX4	Q92988	240 aa	Predicted RBP	13.68	□□□□□ -0.22
MRPL28-203	ENST00000429738	RHOV	Q96L33	236 aa		13.68	□□□□□ -0.22
MRPL28-203	ENST00000429738	YTHDF1	Q9BYJ9	559 aa	Known RBP	13.68	□□□□□ -0.22
MRPL28-203	ENST00000429738	SLA2	Q9H6Q3	261 aa		13.68	□□□□□ -0.22
MRPL28-203	ENST00000429738	ELF5	Q9UKW6	265 aa	Predicted RBP	13.68	□□□□□ -0.22
MRPL28-203	ENST00000429738	STUB1	Q9UNE7	303 aa		13.68	□□□□□ -0.22
MRPL28-203	ENST00000429738	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.68	□□□□□ -0.22
MRPL28-203	ENST00000429738	EPPK1	P58107	5090 aa	Known RBP	13.67	□□□□□ -0.22
MRPL28-203	ENST00000429738	IGHV4OR15-8	A0A075B7B6	117 aa		13.67	□□□□□ -0.22
MRPL28-203	ENST00000429738		A0A087WW49	117 aa		13.67	□□□□□ -0.22
MRPL28-203	ENST00000429738	SMIM30	A4D0T7	59 aa		13.67	□□□□□ -0.22
MRPL28-203	ENST00000429738	PSMB9	P28065	219 aa		13.67	□□□□□ -0.22
MRPL28-203	ENST00000429738	SLURP1	P55000	103 aa		13.67	□□□□□ -0.22
MRPL28-203	ENST00000429738	ARFRP1	Q13795	201 aa		13.67	□□□□□ -0.22
MRPL28-203	ENST00000429738	FXYD3	Q14802	87 aa		13.67	□□□□□ -0.22
MRPL28-203	ENST00000429738	TMEM177	Q53S58	311 aa		13.67	□□□□□ -0.22
MRPL28-203	ENST00000429738	ZNF429	Q86V71	674 aa		13.67	□□□□□ -0.22
MRPL28-203	ENST00000429738	DDB2	Q92466	427 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms