RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 ZCCHC14Q8WYQ9 949 aaKnown RBP11□□□□□ -0.65
LDB3-205ENST00000429277 SOSTQ9BQB4 213 aa11□□□□□ -0.65
LDB3-205ENST00000429277 MOB4Q9Y3A3 225 aa11□□□□□ -0.65
LDB3-205ENST00000429277 LHFPL6Q9Y693 200 aa11□□□□□ -0.65
LDB3-205ENST00000429277 ASCC3Q8N3C0 2202 aaKnown RBP11□□□□□ -0.65
LDB3-205ENST00000429277 PGPA6NDG6 321 aa11□□□□□ -0.65
LDB3-205ENST00000429277 ZNF883P0CG24 379 aa11□□□□□ -0.65
LDB3-205ENST00000429277 RND2P52198 227 aa11□□□□□ -0.65
LDB3-205ENST00000429277 ZNF146Q15072 292 aa11□□□□□ -0.65
LDB3-205ENST00000429277 OR51G1Q8NGK1 321 aa11□□□□□ -0.65
LDB3-205ENST00000429277 CTHRC1Q96CG8 243 aa11□□□□□ -0.65
LDB3-205ENST00000429277 APELAP0DMC3 54 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 TCTAP57738 103 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 ATP5G2Q06055 141 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 LHFPL5Q8TAF8 219 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 FBLIM1Q8WUP2 373 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 Q96M66 194 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 ZNF831Q5JPB2 1677 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 TRBV9A0A0B4J1U6 114 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 NDUFB4O95168 129 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 IL11P20809 199 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 P2RY4P51582 365 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 NUBP1P53384 320 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 UNQ9370/PRO34162Q6UXP9 181 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 TCF24Q7RTU0 167 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 OR4B1Q8NGF8 309 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 KLF14Q8TD94 323 aaPredicted RBP10.99□□□□□ -0.65
LDB3-205ENST00000429277 EEF1AKMT3Q96AZ1 226 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 SMIM8Q96KF7 97 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 CD74P04233 296 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 MUC1P15941 1255 aaPredicted RBP10.99□□□□□ -0.65
LDB3-205ENST00000429277 TNFRSF9Q07011 255 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 TPRX1Q8N7U7 411 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 SPSB4Q96A44 273 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 NPDC1Q9NQX5 325 aaPredicted RBP10.99□□□□□ -0.65
LDB3-205ENST00000429277 LOC105371242A0A075B767 164 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 C9orf172C9J069 976 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 SP9P0CG40 484 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 CA7P43166 264 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 CIRBPQ14011 172 aaKnown RBP10.99□□□□□ -0.65
LDB3-205ENST00000429277 C12orf54Q6X4T0 127 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 SELENOHQ8IZQ5 122 aaKnown RBP10.99□□□□□ -0.65
LDB3-205ENST00000429277 ZNF502Q8TBZ5 544 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 VN1R17PQ8TDU5 208 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 IL36RNQ9UBH0 155 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 LTBP4Q8N2S1 1624 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 IGHV3-21A0A0B4J1V1 117 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 K7ERU9 68 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 CA2P00918 260 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 FUT5Q11128 374 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 PCOLCEQ15113 449 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 COL5A1-AS1Q5SY13 56 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 ABHD12Q8N2K0 398 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 GPR146Q96CH1 333 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 PHLDA3Q9Y5J5 127 aa10.99□□□□□ -0.65
LDB3-205ENST00000429277 MARCH11A6NNE9 402 aa10.98□□□□□ -0.65
LDB3-205ENST00000429277 NPIPB11E5RHQ5 1161 aa10.98□□□□□ -0.65
LDB3-205ENST00000429277 KLRB1Q12918 225 aa10.98□□□□□ -0.65
LDB3-205ENST00000429277 HERPUD1Q15011 391 aa10.98□□□□□ -0.65
LDB3-205ENST00000429277 RCC1P18754 421 aaPredicted RBP10.98□□□□□ -0.65
LDB3-205ENST00000429277 UQCRFS1P47985 274 aa10.98□□□□□ -0.65
LDB3-205ENST00000429277 RUNX1Q01196 453 aa10.98□□□□□ -0.65
LDB3-205ENST00000429277 NRN1LQ496H8 165 aa10.98□□□□□ -0.65
LDB3-205ENST00000429277 FHL5Q5TD97 284 aa10.98□□□□□ -0.65
LDB3-205ENST00000429277 TMEM54Q969K7 222 aa10.98□□□□□ -0.65
LDB3-205ENST00000429277 COLQQ9Y215 455 aaPredicted RBP10.98□□□□□ -0.65
LDB3-205ENST00000429277 AMY1AP04745 511 aa10.98□□□□□ -0.65
LDB3-205ENST00000429277 GATAD1Q8WUU5 269 aa10.98□□□□□ -0.65
LDB3-205ENST00000429277 OR5AC2Q9NZP5 309 aa10.98□□□□□ -0.65
LDB3-205ENST00000429277 RALYQ9UKM9 306 aaKnown RBP10.98□□□□□ -0.65
LDB3-205ENST00000429277 CELA2AP08217 269 aa10.98□□□□□ -0.65
LDB3-205ENST00000429277 ANOS1P23352 680 aa10.98□□□□□ -0.65
LDB3-205ENST00000429277 UNC119Q13432 240 aa10.98□□□□□ -0.65
LDB3-205ENST00000429277 OR4C46A6NHA9 309 aa10.97□□□□□ -0.65
LDB3-205ENST00000429277 SLC25A17O43808 307 aa10.97□□□□□ -0.65
LDB3-205ENST00000429277 SLC25A53Q5H9E4 307 aa10.97□□□□□ -0.65
LDB3-205ENST00000429277 RSG1Q9BU20 258 aa10.97□□□□□ -0.65
LDB3-205ENST00000429277 OR51M1Q9H341 326 aa10.97□□□□□ -0.65
LDB3-205ENST00000429277 IGHV1-69-2A0A0G2JMI3 117 aa10.97□□□□□ -0.65
LDB3-205ENST00000429277 HCP5Q6MZN7 132 aa10.97□□□□□ -0.65
LDB3-205ENST00000429277 GREM1O60565 184 aa10.97□□□□□ -0.65
LDB3-205ENST00000429277 HKR1P10072 659 aa10.97□□□□□ -0.65
LDB3-205ENST00000429277 NMUP48645 174 aa10.97□□□□□ -0.65
LDB3-205ENST00000429277 SNRPD3P62318 126 aaKnown RBP10.97□□□□□ -0.65
LDB3-205ENST00000429277 CX3CL1P78423 397 aa10.97□□□□□ -0.65
LDB3-205ENST00000429277 RNFT1Q5M7Z0 435 aa10.97□□□□□ -0.65
LDB3-205ENST00000429277 SAPCD1Q5SSQ6 148 aa10.97□□□□□ -0.65
LDB3-205ENST00000429277 Q6ZT83 130 aa10.97□□□□□ -0.65
LDB3-205ENST00000429277 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.97□□□□□ -0.65
LDB3-205ENST00000429277 C1orf162Q8NEQ5 155 aaPredicted RBP10.97□□□□□ -0.65
LDB3-205ENST00000429277 MS4A3Q96HJ5 214 aa10.97□□□□□ -0.65
LDB3-205ENST00000429277 ZNF250P15622 560 aa10.97□□□□□ -0.65
LDB3-205ENST00000429277 NPPCP23582 126 aa10.97□□□□□ -0.65
LDB3-205ENST00000429277 TIMM23BQ5SRD1 257 aa10.97□□□□□ -0.65
LDB3-205ENST00000429277 ZNF383Q8NA42 475 aa10.97□□□□□ -0.65
LDB3-205ENST00000429277 GUCD1Q96NT3 240 aa10.97□□□□□ -0.65
LDB3-205ENST00000429277 PSMG3Q9BT73 122 aaPredicted RBP10.97□□□□□ -0.65
LDB3-205ENST00000429277 WNT5BQ9H1J7 359 aa10.97□□□□□ -0.65
LDB3-205ENST00000429277 TCF19Q9Y242 345 aa10.97□□□□□ -0.65
LDB3-205ENST00000429277 PAM16Q9Y3D7 125 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms