RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 ZNF585BQ52M93 769 aa13.09□□□□□ -0.31
TVP23C-203ENST00000428082 VHLLQ6RSH7 139 aa13.09□□□□□ -0.31
TVP23C-203ENST00000428082 DMRTC2Q8IXT2 367 aaPredicted RBP13.09□□□□□ -0.31
TVP23C-203ENST00000428082 ZFP82Q8N141 532 aa13.09□□□□□ -0.31
TVP23C-203ENST00000428082 DRAM1Q8N682 238 aa13.09□□□□□ -0.31
TVP23C-203ENST00000428082 CLDND2Q8NHS1 167 aa13.09□□□□□ -0.31
TVP23C-203ENST00000428082 C2CD4CQ8TF44 421 aa13.09□□□□□ -0.31
TVP23C-203ENST00000428082 NINJ1Q92982 152 aa13.09□□□□□ -0.31
TVP23C-203ENST00000428082 ABHD14AQ9BUJ0 271 aa13.09□□□□□ -0.31
TVP23C-203ENST00000428082 C20orf24Q9BUV8 137 aa13.09□□□□□ -0.31
TVP23C-203ENST00000428082 PUS1Q9Y606 427 aaKnown RBP eCLIP13.09□□□□□ -0.31
TVP23C-203ENST00000428082 ROS1P08922 2347 aa13.09□□□□□ -0.31
TVP23C-203ENST00000428082 S100A8P05109 93 aa13.09□□□□□ -0.31
TVP23C-203ENST00000428082 RUNX1Q01196 453 aa13.09□□□□□ -0.31
TVP23C-203ENST00000428082 TMEM267Q0VDI3 215 aaPredicted RBP13.09□□□□□ -0.31
TVP23C-203ENST00000428082 ICAM4Q14773 271 aa13.09□□□□□ -0.31
TVP23C-203ENST00000428082 TRAT1Q6PIZ9 186 aa13.09□□□□□ -0.31
TVP23C-203ENST00000428082 Q6ZRM9 215 aa13.09□□□□□ -0.31
TVP23C-203ENST00000428082 LILRB2Q8N423 598 aa13.09□□□□□ -0.31
TVP23C-203ENST00000428082 NIPSNAP3BQ9BS92 247 aa13.09□□□□□ -0.31
TVP23C-203ENST00000428082 LAMP3Q9UQV4 416 aa13.09□□□□□ -0.31
TVP23C-203ENST00000428082 COL12A1Q99715 3063 aa13.09□□□□□ -0.31
TVP23C-203ENST00000428082 ARID1AO14497 2285 aa13.08□□□□□ -0.31
TVP23C-203ENST00000428082 A0A1W2PPH5 198 aa13.08□□□□□ -0.32
TVP23C-203ENST00000428082 CXorf65A6NEN9 183 aa13.08□□□□□ -0.32
TVP23C-203ENST00000428082 SHISA9B4DS77 424 aa13.08□□□□□ -0.32
TVP23C-203ENST00000428082 H3BQ15 152 aa13.08□□□□□ -0.32
TVP23C-203ENST00000428082 IFNL4K9M1U5 179 aa13.08□□□□□ -0.32
TVP23C-203ENST00000428082 OR2C1O95371 312 aa13.08□□□□□ -0.32
TVP23C-203ENST00000428082 PLAUP00749 431 aa13.08□□□□□ -0.32
TVP23C-203ENST00000428082 IFNA17P01571 189 aa13.08□□□□□ -0.32
TVP23C-203ENST00000428082 CD3EP07766 207 aa13.08□□□□□ -0.32
TVP23C-203ENST00000428082 KITLGP21583 273 aa13.08□□□□□ -0.32
TVP23C-203ENST00000428082 LOXP28300 417 aaPredicted RBP13.08□□□□□ -0.32
TVP23C-203ENST00000428082 HAGHQ16775 308 aa13.08□□□□□ -0.32
TVP23C-203ENST00000428082 ATP6V1FQ16864 119 aa13.08□□□□□ -0.32
TVP23C-203ENST00000428082 LRRC75BQ2VPJ9 315 aa13.08□□□□□ -0.32
TVP23C-203ENST00000428082 ZNF718Q3SXZ3 478 aa13.08□□□□□ -0.32
TVP23C-203ENST00000428082 SLC35E3Q7Z769 313 aa13.08□□□□□ -0.32
TVP23C-203ENST00000428082 ZNF295-AS1Q8N0V1 137 aa13.08□□□□□ -0.32
TVP23C-203ENST00000428082 ZNF525Q8N782 197 aa13.08□□□□□ -0.32
TVP23C-203ENST00000428082 NUP37Q8NFH4 326 aa13.08□□□□□ -0.32
TVP23C-203ENST00000428082 MBD3L1Q8WWY6 194 aa13.08□□□□□ -0.32
TVP23C-203ENST00000428082 TVP23CQ96ET8 276 aa13.08□□□□□ -0.32
TVP23C-203ENST00000428082 TCEAL7Q9BRU2 100 aa13.08□□□□□ -0.32
TVP23C-203ENST00000428082 SIRT7Q9NRC8 400 aa13.08□□□□□ -0.32
TVP23C-203ENST00000428082 SPTAN1Q13813 2472 aaKnown RBP13.08□□□□□ -0.32
TVP23C-203ENST00000428082 ICE1Q9Y2F5 2266 aa13.08□□□□□ -0.32
TVP23C-203ENST00000428082 B4DEV8 164 aa13.07□□□□□ -0.32
TVP23C-203ENST00000428082 H3BP45 60 aa13.07□□□□□ -0.32
TVP23C-203ENST00000428082 GCH1P30793 250 aa13.07□□□□□ -0.32
TVP23C-203ENST00000428082 UBE2KP61086 200 aa13.07□□□□□ -0.32
TVP23C-203ENST00000428082 MBNL2Q5VZF2 373 aaKnown RBP13.07□□□□□ -0.32
TVP23C-203ENST00000428082 LRP11Q86VZ4 500 aa13.07□□□□□ -0.32
TVP23C-203ENST00000428082 C1QL4Q86Z23 238 aa13.07□□□□□ -0.32
TVP23C-203ENST00000428082 FGFRL1Q8N441 504 aa13.07□□□□□ -0.32
TVP23C-203ENST00000428082 FAM216AQ8WUB2 273 aa13.07□□□□□ -0.32
TVP23C-203ENST00000428082 NEUROG1Q92886 237 aa13.07□□□□□ -0.32
TVP23C-203ENST00000428082 C12orf57Q99622 126 aa13.07□□□□□ -0.32
TVP23C-203ENST00000428082 TIMM9Q9Y5J7 89 aa13.07□□□□□ -0.32
TVP23C-203ENST00000428082 LRRK2Q5S007 2527 aa13.07□□□□□ -0.32
TVP23C-203ENST00000428082 TRAV39A0A0B4J263 110 aa13.07□□□□□ -0.32
TVP23C-203ENST00000428082 LOC102723971A0A1B0GUV8 181 aa13.07□□□□□ -0.32
TVP23C-203ENST00000428082 C5orf52A6NGY3 159 aa13.07□□□□□ -0.32
TVP23C-203ENST00000428082 A6NLC8 198 aa13.07□□□□□ -0.32
TVP23C-203ENST00000428082 PPIHO43447 177 aaKnown RBP13.07□□□□□ -0.32
TVP23C-203ENST00000428082 IFNA1P01562 189 aa13.07□□□□□ -0.32
TVP23C-203ENST00000428082 IAPPP10997 89 aa13.07□□□□□ -0.32
TVP23C-203ENST00000428082 RPS23P62266 143 aaKnown RBP13.07□□□□□ -0.32
TVP23C-203ENST00000428082 S100A12P80511 92 aa13.07□□□□□ -0.32
TVP23C-203ENST00000428082 ZNF429Q86V71 674 aa13.07□□□□□ -0.32
TVP23C-203ENST00000428082 CISD1Q9NZ45 108 aaKnown RBP13.07□□□□□ -0.32
TVP23C-203ENST00000428082 RFNGQ9Y644 331 aa13.07□□□□□ -0.32
TVP23C-203ENST00000428082 ABCA4P78363 2273 aa13.06□□□□□ -0.32
TVP23C-203ENST00000428082 UBE2CO00762 179 aa13.06□□□□□ -0.32
TVP23C-203ENST00000428082 TIMM8AO60220 97 aaPredicted RBP13.06□□□□□ -0.32
TVP23C-203ENST00000428082 METTL15P1P0C7V9 234 aa13.06□□□□□ -0.32
TVP23C-203ENST00000428082 TAGLN2P37802 199 aaKnown RBP13.06□□□□□ -0.32
TVP23C-203ENST00000428082 OR3A1P47881 315 aa13.06□□□□□ -0.32
TVP23C-203ENST00000428082 MEOX2P50222 304 aa13.06□□□□□ -0.32
TVP23C-203ENST00000428082 SMIM21Q3B7S5 101 aa13.06□□□□□ -0.32
TVP23C-203ENST00000428082 ACP7Q6ZNF0 438 aa13.06□□□□□ -0.32
TVP23C-203ENST00000428082 FAM24BQ8N5W8 94 aa13.06□□□□□ -0.32
TVP23C-203ENST00000428082 ISOC2Q96AB3 205 aa13.06□□□□□ -0.32
TVP23C-203ENST00000428082 LURAP1Q96LR2 239 aa13.06□□□□□ -0.32
TVP23C-203ENST00000428082 P2RX4Q99571 388 aa13.06□□□□□ -0.32
TVP23C-203ENST00000428082 DUSP13Q9UII6 198 aa13.06□□□□□ -0.32
TVP23C-203ENST00000428082 H0YL77 283 aa13.05□□□□□ -0.32
TVP23C-203ENST00000428082 LY86O95711 162 aa13.05□□□□□ -0.32
TVP23C-203ENST00000428082 S100A9P06702 114 aaKnown RBP13.05□□□□□ -0.32
TVP23C-203ENST00000428082 DAOP14920 347 aa13.05□□□□□ -0.32
TVP23C-203ENST00000428082 SNRPEP62304 92 aaKnown RBP13.05□□□□□ -0.32
TVP23C-203ENST00000428082 PNRC1Q12796 327 aaPredicted RBP13.05□□□□□ -0.32
TVP23C-203ENST00000428082 TMEM41BQ5BJD5 291 aa13.05□□□□□ -0.32
TVP23C-203ENST00000428082 ZNF787Q6DD87 383 aa13.05□□□□□ -0.32
TVP23C-203ENST00000428082 ZNF66Q6ZN08 573 aa13.05□□□□□ -0.32
TVP23C-203ENST00000428082 FAM222BQ8WU58 562 aa13.05□□□□□ -0.32
TVP23C-203ENST00000428082 RAB39BQ96DA2 213 aa13.05□□□□□ -0.32
TVP23C-203ENST00000428082 CIB3Q96Q77 187 aaPredicted RBP13.05□□□□□ -0.32
TVP23C-203ENST00000428082 MRPL37Q9BZE1 423 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms