RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 ARPC4P59998 168 aa5.92□□□□□ -1.46
LINC01049-201ENST00000426840 MRPS10P82664 201 aaKnown RBP5.92□□□□□ -1.46
LINC01049-201ENST00000426840 DYRK1AQ13627 763 aa5.92□□□□□ -1.46
LINC01049-201ENST00000426840 IL18Q14116 193 aa5.92□□□□□ -1.46
LINC01049-201ENST00000426840 CNPY1Q3B7I2 92 aa5.92□□□□□ -1.46
LINC01049-201ENST00000426840 RNASE12Q5GAN4 147 aaKnown RBP5.92□□□□□ -1.46
LINC01049-201ENST00000426840 ZNF660Q6AZW8 331 aaPredicted RBP5.92□□□□□ -1.46
LINC01049-201ENST00000426840 FAM71F2Q6NXP2 309 aa5.92□□□□□ -1.46
LINC01049-201ENST00000426840 TGIF2LXQ8IUE1 241 aa5.92□□□□□ -1.46
LINC01049-201ENST00000426840 OR56B4Q8NH76 319 aa5.92□□□□□ -1.46
LINC01049-201ENST00000426840 CAPSLQ8WWF8 208 aa5.92□□□□□ -1.46
LINC01049-201ENST00000426840 FCAMRQ8WWV6 532 aa5.92□□□□□ -1.46
LINC01049-201ENST00000426840 TMEM158Q8WZ71 300 aa5.92□□□□□ -1.46
LINC01049-201ENST00000426840 C5orf30Q96GV9 206 aa5.92□□□□□ -1.46
LINC01049-201ENST00000426840 S1PR3Q99500 378 aa5.92□□□□□ -1.46
LINC01049-201ENST00000426840 MRPL20Q9BYC9 149 aaKnown RBP5.92□□□□□ -1.46
LINC01049-201ENST00000426840 IFT46Q9NQC8 304 aa5.92□□□□□ -1.46
LINC01049-201ENST00000426840 ABCB10Q9NRK6 738 aa5.92□□□□□ -1.46
LINC01049-201ENST00000426840 NECAP2Q9NVZ3 263 aa5.92□□□□□ -1.46
LINC01049-201ENST00000426840 SDHAF2Q9NX18 166 aa5.92□□□□□ -1.46
LINC01049-201ENST00000426840 C1RLQ9NZP8 487 aa5.92□□□□□ -1.46
LINC01049-201ENST00000426840 ZNF221Q9UK13 617 aa5.92□□□□□ -1.46
LINC01049-201ENST00000426840 PITPNC1Q9UKF7 332 aa5.92□□□□□ -1.46
LINC01049-201ENST00000426840 RBMX2Q9Y388 322 aaKnown RBP5.92□□□□□ -1.46
LINC01049-201ENST00000426840 V9GYH0 126 aa5.92□□□□□ -1.46
LINC01049-201ENST00000426840 TMEM89A2RUT3 159 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 TXNL1O43396 289 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 CHST1O43916 411 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 TSPAN9O75954 239 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 IGLV2-14P01704 120 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 FAM106CPP0CH98 169 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 HKR1P10072 659 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 AADACP22760 399 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 PTBP1P26599 531 aaKnown RBP eCLIP5.91□□□□□ -1.46
LINC01049-201ENST00000426840 S100A5P33763 92 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 HRH1P35367 487 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 GPR12P47775 334 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 LUMP51884 338 aaPredicted RBP5.91□□□□□ -1.46
LINC01049-201ENST00000426840 ARHGDIBP52566 201 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 RPL15P61313 204 aaKnown RBP5.91□□□□□ -1.46
LINC01049-201ENST00000426840 RPL11P62913 178 aaKnown RBP5.91□□□□□ -1.46
LINC01049-201ENST00000426840 LSAMPQ13449 338 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 ZNF79Q15937 498 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 FAM131AQ6UXB0 335 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 TMEM219Q86XT9 240 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 Q8N6K4 173 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 ZNF383Q8NA42 475 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 TMEM229BQ8NBD8 167 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.91□□□□□ -1.46
LINC01049-201ENST00000426840 OR5AN1Q8NGI8 311 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 OR5H2Q8NGV7 314 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 CHAC2Q8WUX2 184 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 SMIM4Q8WVI0 70 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 RITA1Q96K30 269 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 RBM14Q96PK6 669 aaKnown RBP5.91□□□□□ -1.46
LINC01049-201ENST00000426840 C19orf24Q9BVV8 132 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 OR2D2Q9H210 308 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 PLSCR3Q9NRY6 295 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 EHFQ9NZC4 300 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 FBXL7Q9UJT9 491 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 ATRQ13535 2644 aa5.91□□□□□ -1.46
LINC01049-201ENST00000426840 RNF212BA8MTL3 300 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 H0YJW9 148 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 M0QYG6 137 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 M0R1X1 148 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 OR2F2O95006 317 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 NDUFA7O95182 113 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 PPYP01298 95 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 IGKV1D-33P01593 117 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 IGKV1-33P01594 117 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 CD74P04233 296 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 CD3DP04234 171 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 AMY1AP04745 511 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 AMY2AP04746 511 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 CRYBA1P05813 215 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 ZNF735P0CB33 412 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 MC5RP33032 325 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 TAS2R46P59540 309 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 RPL30P62888 115 aaKnown RBP5.9□□□□□ -1.46
LINC01049-201ENST00000426840 BLCAPP62952 87 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 SSBP1Q04837 148 aaKnown RBP5.9□□□□□ -1.46
LINC01049-201ENST00000426840 EIF4EBP1Q13541 118 aaPredicted RBP5.9□□□□□ -1.46
LINC01049-201ENST00000426840 HNF4GQ14541 408 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 MSMO1Q15800 293 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 VAX1Q5SQQ9 334 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 GLDNQ6ZMI3 551 aaPredicted RBP5.9□□□□□ -1.46
LINC01049-201ENST00000426840 Q6ZSV7 163 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 C16orf82Q7Z2V1 217 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 ZNF645Q8N7E2 425 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 DRAXINQ8NBI3 349 aaPredicted RBP5.9□□□□□ -1.46
LINC01049-201ENST00000426840 OR6F1Q8NGZ6 308 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 OR2T10Q8NGZ9 312 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 CCDC140Q96MF4 163 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 ZNF2Q9BSG1 426 aaPredicted RBP5.9□□□□□ -1.46
LINC01049-201ENST00000426840 THAP7Q9BT49 309 aaPredicted RBP5.9□□□□□ -1.46
LINC01049-201ENST00000426840 TINAGL1Q9GZM7 467 aaPredicted RBP5.9□□□□□ -1.46
LINC01049-201ENST00000426840 C16orf95Q9H693 158 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 CCL28Q9NRJ3 127 aa5.9□□□□□ -1.46
LINC01049-201ENST00000426840 ZNF107Q9UII5 783 aaPredicted RBP5.9□□□□□ -1.46
LINC01049-201ENST00000426840 RBM7Q9Y580 266 aaKnown RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms