RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 PSG1P11464 419 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 BCL3P20749 454 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 MSR1P21757 451 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 C17orf67Q0P5P2 114 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 C16orf54Q6UWD8 224 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 S100A7AQ86SG5 101 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 ZDHHC16Q969W1 377 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 NRN1Q9NPD7 142 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 CRIM1Q9NZV1 1036 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 RPH3ALQ9UNE2 315 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 FER1L5A0AVI2 2057 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 OR6C6A6NF89 314 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 TUSC2O75896 110 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 CLDN14O95500 239 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 KRASP01116 189 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 IGKV1-5P01602 117 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 GABRG2P18507 467 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 Q6ZS52 159 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 Q8N976 141 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 DEPPQ9NTK1 212 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 UQCR10Q9UDW1 63 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 RBMXL2O75526 392 aaKnown RBP9.55□□□□□ -0.88
SEC61A1-202ENST00000424880 B4GALT1P15291 398 aa9.55□□□□□ -0.88
SEC61A1-202ENST00000424880 DRD1P21728 446 aa9.55□□□□□ -0.88
SEC61A1-202ENST00000424880 OTX1P32242 354 aaPredicted RBP9.55□□□□□ -0.88
SEC61A1-202ENST00000424880 EDDM3BP56851 147 aa9.55□□□□□ -0.88
SEC61A1-202ENST00000424880 RBM11P57052 281 aaKnown RBP9.55□□□□□ -0.88
SEC61A1-202ENST00000424880 HBG1P69891 147 aa9.55□□□□□ -0.88
SEC61A1-202ENST00000424880 HBG2P69892 147 aa9.55□□□□□ -0.88
SEC61A1-202ENST00000424880 TMEM144Q7Z5S9 345 aa9.55□□□□□ -0.88
SEC61A1-202ENST00000424880 OCC1Q8TAD7 63 aa9.55□□□□□ -0.88
SEC61A1-202ENST00000424880 PTRH2Q9Y3E5 179 aaKnown RBP9.55□□□□□ -0.88
SEC61A1-202ENST00000424880 FREM1Q5H8C1 2179 aa9.55□□□□□ -0.88
SEC61A1-202ENST00000424880 DOCK10Q96BY6 2186 aa9.55□□□□□ -0.88
SEC61A1-202ENST00000424880 TRAV30A0A087WSZ9 112 aa9.55□□□□□ -0.88
SEC61A1-202ENST00000424880 TMEM250H0YL14 139 aa9.55□□□□□ -0.88
SEC61A1-202ENST00000424880 TIAF1O95411 115 aa9.55□□□□□ -0.88
SEC61A1-202ENST00000424880 GFRA1P56159 465 aa9.55□□□□□ -0.88
SEC61A1-202ENST00000424880 SERF2P84101 59 aa9.55□□□□□ -0.88
SEC61A1-202ENST00000424880 ZNF596Q8TC21 504 aa9.55□□□□□ -0.88
SEC61A1-202ENST00000424880 NUDT11Q96G61 164 aa9.55□□□□□ -0.88
SEC61A1-202ENST00000424880 METTL7AQ9H8H3 244 aa9.55□□□□□ -0.88
SEC61A1-202ENST00000424880 MDFIC2A0A1B0GVS7 189 aa9.54□□□□□ -0.88
SEC61A1-202ENST00000424880 SCO2A0A1W2PP80 73 aa9.54□□□□□ -0.88
SEC61A1-202ENST00000424880 MRPS21P82921 87 aaKnown RBP9.54□□□□□ -0.88
SEC61A1-202ENST00000424880 C9orf135Q5VTT2 229 aa9.54□□□□□ -0.88
SEC61A1-202ENST00000424880 C1orf174Q8IYL3 243 aa9.54□□□□□ -0.88
SEC61A1-202ENST00000424880 LMX1AQ8TE12 382 aa9.54□□□□□ -0.88
SEC61A1-202ENST00000424880 RAB40CQ96S21 281 aa9.54□□□□□ -0.88
SEC61A1-202ENST00000424880 FSCN3Q9NQT6 498 aa9.54□□□□□ -0.88
SEC61A1-202ENST00000424880 IGKV3D-11A0A0A0MRZ8 115 aa9.54□□□□□ -0.88
SEC61A1-202ENST00000424880 GPX1P07203 203 aa9.54□□□□□ -0.88
SEC61A1-202ENST00000424880 FXYD3Q14802 87 aa9.54□□□□□ -0.88
SEC61A1-202ENST00000424880 OR8I2Q8N0Y5 310 aa9.54□□□□□ -0.88
SEC61A1-202ENST00000424880 IGLV3-1P01715 115 aa9.54□□□□□ -0.88
SEC61A1-202ENST00000424880 C3orf79P0CE67 100 aa9.54□□□□□ -0.88
SEC61A1-202ENST00000424880 GPM6AP51674 278 aa9.54□□□□□ -0.88
SEC61A1-202ENST00000424880 RHOGP84095 191 aa9.54□□□□□ -0.88
SEC61A1-202ENST00000424880 RPL19P84098 196 aaKnown RBP9.54□□□□□ -0.88
SEC61A1-202ENST00000424880 DEFB133Q30KQ1 61 aa9.54□□□□□ -0.88
SEC61A1-202ENST00000424880 Q56UQ5 140 aa9.54□□□□□ -0.88
SEC61A1-202ENST00000424880 SLC23A3Q6PIS1 610 aa9.54□□□□□ -0.88
SEC61A1-202ENST00000424880 FGFBP3Q8TAT2 258 aa9.54□□□□□ -0.88
SEC61A1-202ENST00000424880 NAT8BQ9UHF3 227 aa9.54□□□□□ -0.88
SEC61A1-202ENST00000424880 TSPOP30536 169 aa9.53□□□□□ -0.88
SEC61A1-202ENST00000424880 APOBEC3AP31941 199 aaPredicted RBP9.53□□□□□ -0.88
SEC61A1-202ENST00000424880 PSG7Q13046 419 aa9.53□□□□□ -0.88
SEC61A1-202ENST00000424880 OCIAD2Q56VL3 154 aa9.53□□□□□ -0.88
SEC61A1-202ENST00000424880 LHFPL4Q7Z7J7 247 aa9.53□□□□□ -0.88
SEC61A1-202ENST00000424880 ST8SIA1Q92185 356 aa9.53□□□□□ -0.88
SEC61A1-202ENST00000424880 APOBEC3DQ96AK3 386 aaPredicted RBP9.53□□□□□ -0.88
SEC61A1-202ENST00000424880 KLHDC7BQ96G42 594 aa9.53□□□□□ -0.88
SEC61A1-202ENST00000424880 PSMG3Q9BT73 122 aaPredicted RBP9.53□□□□□ -0.88
SEC61A1-202ENST00000424880 MCRIP2Q9BUT9 160 aaKnown RBP9.53□□□□□ -0.88
SEC61A1-202ENST00000424880 UBE2ZQ9H832 354 aaPredicted RBP9.53□□□□□ -0.88
SEC61A1-202ENST00000424880 ZNF586Q9NXT0 402 aa9.53□□□□□ -0.88
SEC61A1-202ENST00000424880 KIR2DS5A0A0G2JLQ3 304 aa9.53□□□□□ -0.88
SEC61A1-202ENST00000424880 A0A0G2JNG1 304 aa9.53□□□□□ -0.88
SEC61A1-202ENST00000424880 NPIPB13A6NJU9 1138 aa9.53□□□□□ -0.88
SEC61A1-202ENST00000424880 C10orf142B7Z368 130 aa9.53□□□□□ -0.88
SEC61A1-202ENST00000424880 NPIPB4C9JG80 1138 aa9.53□□□□□ -0.88
SEC61A1-202ENST00000424880 KIR2DS3K7RE56 304 aa9.53□□□□□ -0.88
SEC61A1-202ENST00000424880 RAMP3O60896 148 aa9.53□□□□□ -0.88
SEC61A1-202ENST00000424880 ARL4DP49703 201 aa9.53□□□□□ -0.88
SEC61A1-202ENST00000424880 ZNF83P51522 516 aa9.53□□□□□ -0.88
SEC61A1-202ENST00000424880 ZNF816Q0VGE8 651 aaPredicted RBP9.53□□□□□ -0.88
SEC61A1-202ENST00000424880 KIR2DS5Q14953 304 aa9.53□□□□□ -0.88
SEC61A1-202ENST00000424880 PLPPR5Q32ZL2 321 aa9.53□□□□□ -0.88
SEC61A1-202ENST00000424880 SMG1Q96Q15 3661 aaKnown RBP9.52□□□□□ -0.88
SEC61A1-202ENST00000424880 CTXND1A0A1B0GTU2 59 aa9.52□□□□□ -0.88
SEC61A1-202ENST00000424880 BLACEA4D250 179 aa9.52□□□□□ -0.88
SEC61A1-202ENST00000424880 DPRXA6NFQ7 191 aa9.52□□□□□ -0.88
SEC61A1-202ENST00000424880 OR2T8A6NH00 312 aa9.52□□□□□ -0.88
SEC61A1-202ENST00000424880 ZNF253O75346 499 aa9.52□□□□□ -0.88
SEC61A1-202ENST00000424880 NBEAP1P0C6P0 100 aa9.52□□□□□ -0.88
SEC61A1-202ENST00000424880 G6PCP35575 357 aa9.52□□□□□ -0.88
SEC61A1-202ENST00000424880 YPEL3P61236 119 aaPredicted RBP9.52□□□□□ -0.88
SEC61A1-202ENST00000424880 MRPL54Q6P161 138 aaKnown RBP9.52□□□□□ -0.88
SEC61A1-202ENST00000424880 OR1L3Q8NH93 324 aa9.52□□□□□ -0.88
SEC61A1-202ENST00000424880 SPTSSAQ969W0 71 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms