RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 UNC80Q8N2C7 3258 aa12.76□□□□□ -0.37
C9orf3-204ENST00000424143 COL27A1Q8IZC6 1860 aaPredicted RBP12.75□□□□□ -0.37
C9orf3-204ENST00000424143 KIR2DL5BA0A0G2JN68 375 aa12.75□□□□□ -0.37
C9orf3-204ENST00000424143 KIR2DL5BA0A0G2JPC4 375 aa12.75□□□□□ -0.37
C9orf3-204ENST00000424143 IFNL4K9M1U5 179 aa12.75□□□□□ -0.37
C9orf3-204ENST00000424143 TNFSF15O95150 251 aa12.75□□□□□ -0.37
C9orf3-204ENST00000424143 NXPH2O95156 264 aa12.75□□□□□ -0.37
C9orf3-204ENST00000424143 HAND1O96004 215 aa12.75□□□□□ -0.37
C9orf3-204ENST00000424143 TDGF1P13385 188 aa12.75□□□□□ -0.37
C9orf3-204ENST00000424143 ACP1P24666 158 aa12.75□□□□□ -0.37
C9orf3-204ENST00000424143 OPRK1P41145 380 aa12.75□□□□□ -0.37
C9orf3-204ENST00000424143 SOX8P57073 446 aa12.75□□□□□ -0.37
C9orf3-204ENST00000424143 SELENOTP62341 195 aa12.75□□□□□ -0.37
C9orf3-204ENST00000424143 RPL30P62888 115 aaKnown RBP12.75□□□□□ -0.37
C9orf3-204ENST00000424143 PLGLB1Q02325 96 aa12.75□□□□□ -0.37
C9orf3-204ENST00000424143 OR1C1Q15619 314 aa12.75□□□□□ -0.37
C9orf3-204ENST00000424143 ABHD17BQ5VST6 288 aa12.75□□□□□ -0.37
C9orf3-204ENST00000424143 C9orf135Q5VTT2 229 aa12.75□□□□□ -0.37
C9orf3-204ENST00000424143 SPINK14Q6IE38 97 aa12.75□□□□□ -0.37
C9orf3-204ENST00000424143 H2BFWTQ7Z2G1 175 aa12.75□□□□□ -0.37
C9orf3-204ENST00000424143 KIR2DL5AQ8N109 375 aa12.75□□□□□ -0.37
C9orf3-204ENST00000424143 ZNF407Q9C0G0 2248 aa12.75□□□□□ -0.37
C9orf3-204ENST00000424143 FREM1Q5H8C1 2179 aa12.75□□□□□ -0.37
C9orf3-204ENST00000424143 C12orf77C9JDV5 145 aa12.74□□□□□ -0.37
C9orf3-204ENST00000424143 M0QZK8 103 aa12.74□□□□□ -0.37
C9orf3-204ENST00000424143 KRASP01116 189 aa12.74□□□□□ -0.37
C9orf3-204ENST00000424143 PDGFBP01127 241 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-204ENST00000424143 OR10J1P30954 320 aa12.74□□□□□ -0.37
C9orf3-204ENST00000424143 BRWD1-AS2P59051 145 aa12.74□□□□□ -0.37
C9orf3-204ENST00000424143 GNB1P62873 340 aa12.74□□□□□ -0.37
C9orf3-204ENST00000424143 PAFAH1B2P68402 229 aa12.74□□□□□ -0.37
C9orf3-204ENST00000424143 ZNF124Q15973 351 aa12.74□□□□□ -0.37
C9orf3-204ENST00000424143 NECAP1Q8NC96 275 aa12.74□□□□□ -0.37
C9orf3-204ENST00000424143 C5orf30Q96GV9 206 aa12.74□□□□□ -0.37
C9orf3-204ENST00000424143 TTTY12Q9BZ98 90 aa12.74□□□□□ -0.37
C9orf3-204ENST00000424143 FKBP11Q9NYL4 201 aa12.74□□□□□ -0.37
C9orf3-204ENST00000424143 CLN8Q9UBY8 286 aa12.74□□□□□ -0.37
C9orf3-204ENST00000424143 CEP290O15078 2479 aa12.74□□□□□ -0.37
C9orf3-204ENST00000424143 ARHGAP21Q5T5U3 1957 aa12.74□□□□□ -0.37
C9orf3-204ENST00000424143 PCSK5Q92824 1860 aa12.74□□□□□ -0.37
C9orf3-204ENST00000424143 C15orf62A8K5M9 175 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 RBFOX2O43251 390 aaKnown RBP eCLIP12.73□□□□□ -0.372e-8■■■■□ 22.3
C9orf3-204ENST00000424143 ZG16O60844 167 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 RAMP3O60896 148 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 S1PR2O95136 353 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 SELLP14151 372 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 G6PCP35575 357 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 HTD2P86397 168 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 SRYQ05066 204 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 TFF3Q07654 80 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 MDP1Q86V88 176 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 MRPL41Q8IXM3 137 aaKnown RBP12.73□□□□□ -0.37
C9orf3-204ENST00000424143 TMEM251Q8N6I4 163 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 THOC3Q96J01 351 aaKnown RBP12.73□□□□□ -0.37
C9orf3-204ENST00000424143 OR2D2Q9H210 308 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 ELOVL5Q9NYP7 299 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 WASF3Q9UPY6 502 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 TRAPPC1Q9Y5R8 145 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 ARL2-SNX15V9GYD0 113 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 DOCK10Q96BY6 2186 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 C17orf98A8MV24 154 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 SMPD2O60906 423 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 HBZP02008 142 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 ADH4P08319 380 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 CD1BP29016 333 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 OR3A1P47881 315 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 TIPARPQ7Z3E1 657 aaKnown RBP12.73□□□□□ -0.37
C9orf3-204ENST00000424143 DMRTC2Q8IXT2 367 aaPredicted RBP12.73□□□□□ -0.37
C9orf3-204ENST00000424143 UBALD2Q8IYN6 164 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 OR1L1Q8NH94 360 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 GATAD1Q8WUU5 269 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 NINJ1Q92982 152 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 FSCN3Q9NQT6 498 aa12.73□□□□□ -0.37
C9orf3-204ENST00000424143 ESPL1Q14674 2120 aa12.72□□□□□ -0.37
C9orf3-204ENST00000424143 TRAV39A0A0B4J263 110 aa12.72□□□□□ -0.37
C9orf3-204ENST00000424143 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.72□□□□□ -0.37
C9orf3-204ENST00000424143 ZNF705GA8MUZ8 300 aaPredicted RBP12.72□□□□□ -0.37
C9orf3-204ENST00000424143 TCAPO15273 167 aa12.72□□□□□ -0.37
C9orf3-204ENST00000424143 CFIP05156 583 aa12.72□□□□□ -0.37
C9orf3-204ENST00000424143 CELA3AP09093 270 aa12.72□□□□□ -0.37
C9orf3-204ENST00000424143 STAG3L2P0CL84 134 aa12.72□□□□□ -0.37
C9orf3-204ENST00000424143 STAG3L3P0CL85 134 aa12.72□□□□□ -0.37
C9orf3-204ENST00000424143 RTP5Q14D33 572 aa12.72□□□□□ -0.37
C9orf3-204ENST00000424143 CNTRLQ7Z7A1 2325 aa12.71□□□□□ -0.37
C9orf3-204ENST00000424143 A0A0U1RQK1 487 aa12.71□□□□□ -0.37
C9orf3-204ENST00000424143 ZNF320A2RRD8 509 aa12.71□□□□□ -0.37
C9orf3-204ENST00000424143 C21orf140B9A014 251 aa12.71□□□□□ -0.37
C9orf3-204ENST00000424143 M0R143 59 aa12.71□□□□□ -0.37
C9orf3-204ENST00000424143 CXorf1O96002 111 aa12.71□□□□□ -0.37
C9orf3-204ENST00000424143 CD82P27701 267 aa12.71□□□□□ -0.37
C9orf3-204ENST00000424143 FAM78BQ5VT40 261 aa12.71□□□□□ -0.37
C9orf3-204ENST00000424143 PRR18Q8N4B5 295 aa12.71□□□□□ -0.37
C9orf3-204ENST00000424143 C11orf52Q96A22 123 aa12.71□□□□□ -0.37
C9orf3-204ENST00000424143 SFRP2Q96HF1 295 aa12.71□□□□□ -0.37
C9orf3-204ENST00000424143 NAGKQ9UJ70 344 aa12.71□□□□□ -0.37
C9orf3-204ENST00000424143 KLF13Q9Y2Y9 288 aaPredicted RBP12.71□□□□□ -0.37
C9orf3-204ENST00000424143 LOXL2Q9Y4K0 774 aa12.71□□□□□ -0.37
C9orf3-204ENST00000424143 SDK1Q7Z5N4 2213 aa12.71□□□□□ -0.38
C9orf3-204ENST00000424143 TRBV9A0A0B4J1U6 114 aa12.7□□□□□ -0.38
C9orf3-204ENST00000424143 C9JCJ5 164 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms