RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 A0A1B0GU03 582 aa11.17□□□□□ -0.62
MCF2L-213ENST00000421756 IGHV3-48P01763 117 aa11.17□□□□□ -0.62
MCF2L-213ENST00000421756 ACAA1P09110 424 aaPredicted RBP11.17□□□□□ -0.62
MCF2L-213ENST00000421756 SRP19P09132 144 aaKnown RBP11.17□□□□□ -0.62
MCF2L-213ENST00000421756 CD200P41217 278 aa11.17□□□□□ -0.62
MCF2L-213ENST00000421756 HBG1P69891 147 aa11.17□□□□□ -0.62
MCF2L-213ENST00000421756 HBG2P69892 147 aa11.17□□□□□ -0.62
MCF2L-213ENST00000421756 ZNF726P1Q15940 193 aa11.17□□□□□ -0.62
MCF2L-213ENST00000421756 PRAMEF5Q5TYX0 476 aa11.17□□□□□ -0.62
MCF2L-213ENST00000421756 GFI1BQ5VTD9 330 aa11.17□□□□□ -0.62
MCF2L-213ENST00000421756 ACP7Q6ZNF0 438 aa11.17□□□□□ -0.62
MCF2L-213ENST00000421756 ABHD12Q8N2K0 398 aa11.17□□□□□ -0.62
MCF2L-213ENST00000421756 ITLN1Q8WWA0 313 aa11.17□□□□□ -0.62
MCF2L-213ENST00000421756 SSMEM1Q8WWF3 244 aa11.17□□□□□ -0.62
MCF2L-213ENST00000421756 HEYLQ9NQ87 328 aaPredicted RBP11.17□□□□□ -0.62
MCF2L-213ENST00000421756 ATPIF1Q9UII2 106 aa11.17□□□□□ -0.62
MCF2L-213ENST00000421756 IGHV2OR16-5A0A0B4J2B6 119 aa11.16□□□□□ -0.62
MCF2L-213ENST00000421756 IGKV1D-33P01593 117 aa11.16□□□□□ -0.62
MCF2L-213ENST00000421756 IGKV1-33P01594 117 aa11.16□□□□□ -0.62
MCF2L-213ENST00000421756 RAB5CP51148 216 aa11.16□□□□□ -0.62
MCF2L-213ENST00000421756 WFDC8Q8IUA0 241 aa11.16□□□□□ -0.62
MCF2L-213ENST00000421756 C11orf53Q8IXP5 236 aa11.16□□□□□ -0.62
MCF2L-213ENST00000421756 OR4F5Q8NH21 305 aa11.16□□□□□ -0.62
MCF2L-213ENST00000421756 OR4F4Q96R69 305 aa11.16□□□□□ -0.62
MCF2L-213ENST00000421756 RAB40CQ96S21 281 aa11.16□□□□□ -0.62
MCF2L-213ENST00000421756 QTRT1Q9BXR0 403 aaKnown RBP11.16□□□□□ -0.62
MCF2L-213ENST00000421756 ARV1Q9H2C2 271 aa11.16□□□□□ -0.62
MCF2L-213ENST00000421756 GFOD1Q9NXC2 390 aa11.16□□□□□ -0.62
MCF2L-213ENST00000421756 HCFC1P51610 2035 aa11.16□□□□□ -0.62
MCF2L-213ENST00000421756 DFFBO76075 338 aa11.16□□□□□ -0.62
MCF2L-213ENST00000421756 MT-ND4LP03901 98 aa11.16□□□□□ -0.62
MCF2L-213ENST00000421756 IFNA4P05014 189 aa11.16□□□□□ -0.62
MCF2L-213ENST00000421756 REG1BP48304 166 aa11.16□□□□□ -0.62
MCF2L-213ENST00000421756 ZNF525Q8N782 197 aa11.16□□□□□ -0.62
MCF2L-213ENST00000421756 TRGC2P03986 189 aa11.16□□□□□ -0.62
MCF2L-213ENST00000421756 APELAP0DMC3 54 aa11.16□□□□□ -0.62
MCF2L-213ENST00000421756 PRB4P10163 310 aaPredicted RBP11.16□□□□□ -0.62
MCF2L-213ENST00000421756 TNFRSF9Q07011 255 aa11.16□□□□□ -0.62
MCF2L-213ENST00000421756 FFAR4Q5NUL3 377 aa11.16□□□□□ -0.62
MCF2L-213ENST00000421756 BHLHA15Q7RTS1 189 aaPredicted RBP11.16□□□□□ -0.62
MCF2L-213ENST00000421756 Q8NFD4 153 aa11.16□□□□□ -0.62
MCF2L-213ENST00000421756 DTD1Q8TEA8 209 aa11.16□□□□□ -0.62
MCF2L-213ENST00000421756 Q8WTZ3 238 aa11.16□□□□□ -0.62
MCF2L-213ENST00000421756 CLCF1Q9UBD9 225 aa11.16□□□□□ -0.62
MCF2L-213ENST00000421756 PGPEP1LA6NFU8 196 aa11.15□□□□□ -0.62
MCF2L-213ENST00000421756 SLC31A2O15432 143 aa11.15□□□□□ -0.62
MCF2L-213ENST00000421756 DLX1P56177 255 aa11.15□□□□□ -0.62
MCF2L-213ENST00000421756 NKX6-1P78426 367 aaPredicted RBP11.15□□□□□ -0.62
MCF2L-213ENST00000421756 ZNF709Q8N972 641 aa11.15□□□□□ -0.62
MCF2L-213ENST00000421756 CXXC4Q9H2H0 198 aa11.15□□□□□ -0.62
MCF2L-213ENST00000421756 SS18L1O75177 396 aaPredicted RBP11.15□□□□□ -0.62
MCF2L-213ENST00000421756 NDUFB7P17568 137 aa11.15□□□□□ -0.62
MCF2L-213ENST00000421756 MDH2P40926 338 aaKnown RBP11.15□□□□□ -0.62
MCF2L-213ENST00000421756 MEOX2P50222 304 aa11.15□□□□□ -0.62
MCF2L-213ENST00000421756 INO80CQ6PI98 192 aaPredicted RBP11.15□□□□□ -0.62
MCF2L-213ENST00000421756 ZADH2Q8N4Q0 377 aa11.15□□□□□ -0.62
MCF2L-213ENST00000421756 OR51G1Q8NGK1 321 aa11.15□□□□□ -0.62
MCF2L-213ENST00000421756 CLDND2Q8NHS1 167 aa11.15□□□□□ -0.62
MCF2L-213ENST00000421756 STARD4Q96DR4 205 aa11.15□□□□□ -0.62
MCF2L-213ENST00000421756 CCL13Q99616 98 aa11.15□□□□□ -0.62
MCF2L-213ENST00000421756 SPINT2O43291 252 aa11.15□□□□□ -0.63
MCF2L-213ENST00000421756 ZNF737O75373 536 aa11.15□□□□□ -0.63
MCF2L-213ENST00000421756 CLDN14O95500 239 aa11.15□□□□□ -0.63
MCF2L-213ENST00000421756 SMIM21Q3B7S5 101 aa11.15□□□□□ -0.63
MCF2L-213ENST00000421756 ACSF3Q4G176 576 aaPredicted RBP11.15□□□□□ -0.63
MCF2L-213ENST00000421756 LYG1Q8N1E2 194 aa11.15□□□□□ -0.63
MCF2L-213ENST00000421756 RPP25LQ8N5L8 163 aaKnown RBP11.15□□□□□ -0.63
MCF2L-213ENST00000421756 C15orf54Q8N8G6 183 aa11.15□□□□□ -0.63
MCF2L-213ENST00000421756 OR10P1Q8NGE3 313 aa11.15□□□□□ -0.63
MCF2L-213ENST00000421756 ARHGAP32A7KAX9 2087 aa11.14□□□□□ -0.63
MCF2L-213ENST00000421756 MARCH11A6NNE9 402 aa11.14□□□□□ -0.63
MCF2L-213ENST00000421756 ERVK11-1P61568 191 aa11.14□□□□□ -0.63
MCF2L-213ENST00000421756 CATR1Q13166 79 aa11.14□□□□□ -0.63
MCF2L-213ENST00000421756 ACSM6Q6P461 480 aa11.14□□□□□ -0.63
MCF2L-213ENST00000421756 MUCL1Q96DR8 90 aa11.14□□□□□ -0.63
MCF2L-213ENST00000421756 SMIM7Q9BQ49 75 aa11.14□□□□□ -0.63
MCF2L-213ENST00000421756 KIAA1456Q9P272 454 aa11.14□□□□□ -0.63
MCF2L-213ENST00000421756 ACTL6BO94805 426 aa11.14□□□□□ -0.63
MCF2L-213ENST00000421756 CISD2Q8N5K1 135 aaKnown RBP11.14□□□□□ -0.63
MCF2L-213ENST00000421756 TAF15Q92804 592 aaKnown RBP eCLIP11.14□□□□□ -0.63
MCF2L-213ENST00000421756 WFIKKN1Q96NZ8 548 aa11.14□□□□□ -0.63
MCF2L-213ENST00000421756 GAB2Q9UQC2 676 aa11.14□□□□□ -0.63
MCF2L-213ENST00000421756 IQCF6A8MYZ5 107 aa11.13□□□□□ -0.63
MCF2L-213ENST00000421756 GYPAP02724 150 aa11.13□□□□□ -0.63
MCF2L-213ENST00000421756 HSPB1P04792 205 aaKnown RBP11.13□□□□□ -0.63
MCF2L-213ENST00000421756 Q8IYB0 196 aa11.13□□□□□ -0.63
MCF2L-213ENST00000421756 LFNGQ8NES3 379 aa11.13□□□□□ -0.63
MCF2L-213ENST00000421756 OR10G4Q8NGN3 311 aa11.13□□□□□ -0.63
MCF2L-213ENST00000421756 OR10G9Q8NGN4 311 aa11.13□□□□□ -0.63
MCF2L-213ENST00000421756 OR10G7Q8NGN6 311 aa11.13□□□□□ -0.63
MCF2L-213ENST00000421756 R3HDM4Q96D70 268 aa11.13□□□□□ -0.63
MCF2L-213ENST00000421756 C11orf1Q9H5F2 150 aa11.13□□□□□ -0.63
MCF2L-213ENST00000421756 ASCL3Q9NQ33 180 aa11.13□□□□□ -0.63
MCF2L-213ENST00000421756 WIPI2Q9Y4P8 454 aa11.13□□□□□ -0.63
MCF2L-213ENST00000421756 DSCAMO60469 2012 aa11.13□□□□□ -0.63
MCF2L-213ENST00000421756 OOEPA6NGQ2 149 aa11.13□□□□□ -0.63
MCF2L-213ENST00000421756 PAGE4O60829 102 aa11.13□□□□□ -0.63
MCF2L-213ENST00000421756 OR9G9P0C7N8 305 aa11.13□□□□□ -0.63
MCF2L-213ENST00000421756 ZNF146Q15072 292 aa11.13□□□□□ -0.63
MCF2L-213ENST00000421756 ZNF561Q8N587 486 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms