RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 DEFB136Q30KP8 78 aa12.85□□□□□ -0.35
LINC00404-201ENST00000418660 C19orf54Q5BKX5 351 aa12.85□□□□□ -0.35
LINC00404-201ENST00000418660 LGALS14Q8TCE9 139 aa12.85□□□□□ -0.35
LINC00404-201ENST00000418660 FLYWCH2Q96CP2 140 aaKnown RBP12.85□□□□□ -0.35
LINC00404-201ENST00000418660 UBE2E2Q96LR5 201 aa12.85□□□□□ -0.35
LINC00404-201ENST00000418660 DCSTAMPQ9H295 470 aa12.85□□□□□ -0.35
LINC00404-201ENST00000418660 KLK15Q9H2R5 256 aa12.85□□□□□ -0.35
LINC00404-201ENST00000418660 RNF167Q9H6Y7 350 aa12.85□□□□□ -0.35
LINC00404-201ENST00000418660 FBXO7Q9Y3I1 522 aa12.85□□□□□ -0.35
LINC00404-201ENST00000418660 IGKV1D-8A0A087WSZ0 117 aa12.84□□□□□ -0.35
LINC00404-201ENST00000418660 KRTAP10-11P60412 298 aa12.84□□□□□ -0.35
LINC00404-201ENST00000418660 TAGLNQ01995 201 aaKnown RBP12.84□□□□□ -0.35
LINC00404-201ENST00000418660 EGFEM1PQ0D2K5 195 aa12.84□□□□□ -0.35
LINC00404-201ENST00000418660 TMEM267Q0VDI3 215 aaPredicted RBP12.84□□□□□ -0.35
LINC00404-201ENST00000418660 KIAA0141Q14154 515 aaPredicted RBP12.84□□□□□ -0.35
LINC00404-201ENST00000418660 ZNF260Q3ZCT1 412 aa12.84□□□□□ -0.35
LINC00404-201ENST00000418660 ZNF562Q6V9R5 426 aa12.84□□□□□ -0.35
LINC00404-201ENST00000418660 H1FOOQ8IZA3 346 aaPredicted RBP12.84□□□□□ -0.35
LINC00404-201ENST00000418660 TCTEX1D1Q8N7M0 179 aa12.84□□□□□ -0.35
LINC00404-201ENST00000418660 ZNF491Q8N8L2 437 aa12.84□□□□□ -0.35
LINC00404-201ENST00000418660 DPF1Q92782 380 aa12.84□□□□□ -0.35
LINC00404-201ENST00000418660 ST6GALNAC5Q9BVH7 336 aa12.84□□□□□ -0.35
LINC00404-201ENST00000418660 SLC35D1Q9NTN3 355 aa12.84□□□□□ -0.35
LINC00404-201ENST00000418660 RHBDL2Q9NX52 303 aa12.84□□□□□ -0.35
LINC00404-201ENST00000418660 RBM7Q9Y580 266 aaKnown RBP12.84□□□□□ -0.35
LINC00404-201ENST00000418660 NUBP2Q9Y5Y2 271 aa12.84□□□□□ -0.35
LINC00404-201ENST00000418660 ETV7Q9Y603 341 aa12.84□□□□□ -0.35
LINC00404-201ENST00000418660 CTXN2P0C2S0 81 aa12.83□□□□□ -0.36
LINC00404-201ENST00000418660 EGR2P11161 476 aaPredicted RBP12.83□□□□□ -0.36
LINC00404-201ENST00000418660 HOXD3P31249 432 aaPredicted RBP12.83□□□□□ -0.36
LINC00404-201ENST00000418660 RAB9AP51151 201 aa12.83□□□□□ -0.36
LINC00404-201ENST00000418660 RAB25P57735 213 aa12.83□□□□□ -0.36
LINC00404-201ENST00000418660 ECSCRQ19T08 205 aa12.83□□□□□ -0.36
LINC00404-201ENST00000418660 CLCC1Q96S66 551 aa12.83□□□□□ -0.36
LINC00404-201ENST00000418660 FOXA2Q9Y261 457 aaPredicted RBP12.83□□□□□ -0.36
LINC00404-201ENST00000418660 VSIG4Q9Y279 399 aa12.83□□□□□ -0.36
LINC00404-201ENST00000418660 A0A1W2PN81 502 aa12.82□□□□□ -0.36
LINC00404-201ENST00000418660 TMEM235A6NFC5 223 aa12.82□□□□□ -0.36
LINC00404-201ENST00000418660 CA2P00918 260 aa12.82□□□□□ -0.36
LINC00404-201ENST00000418660 CHRNA7P36544 502 aa12.82□□□□□ -0.36
LINC00404-201ENST00000418660 LGALS7P47929 136 aa12.82□□□□□ -0.36
LINC00404-201ENST00000418660 GNG2P59768 71 aa12.82□□□□□ -0.36
LINC00404-201ENST00000418660 RUNX1Q01196 453 aa12.82□□□□□ -0.36
LINC00404-201ENST00000418660 FHL3Q13643 280 aa12.82□□□□□ -0.36
LINC00404-201ENST00000418660 TIMM50Q3ZCQ8 353 aa12.82□□□□□ -0.36
LINC00404-201ENST00000418660 AKIRIN2Q53H80 203 aa12.82□□□□□ -0.36
LINC00404-201ENST00000418660 IDNKQ5T6J7 187 aa12.82□□□□□ -0.36
LINC00404-201ENST00000418660 PPP1R27Q86WC6 154 aa12.82□□□□□ -0.36
LINC00404-201ENST00000418660 OR11H1Q8NG94 326 aa12.82□□□□□ -0.36
LINC00404-201ENST00000418660 OR5M8Q8NGP6 311 aa12.82□□□□□ -0.36
LINC00404-201ENST00000418660 OR5H6Q8NGV6 325 aa12.82□□□□□ -0.36
LINC00404-201ENST00000418660 ABHD5Q8WTS1 349 aa12.82□□□□□ -0.36
LINC00404-201ENST00000418660 NUDCD2Q8WVJ2 157 aa12.82□□□□□ -0.36
LINC00404-201ENST00000418660 C5orf30Q96GV9 206 aa12.82□□□□□ -0.36
LINC00404-201ENST00000418660 GNB4Q9HAV0 340 aa12.82□□□□□ -0.36
LINC00404-201ENST00000418660 A3GALT2U3KPV4 340 aa12.82□□□□□ -0.36
LINC00404-201ENST00000418660 A0A087WXM4 84 aa12.81□□□□□ -0.36
LINC00404-201ENST00000418660 I3L521 148 aa12.81□□□□□ -0.36
LINC00404-201ENST00000418660 SLC25A17O43808 307 aa12.81□□□□□ -0.36
LINC00404-201ENST00000418660 SSX5O60225 188 aa12.81□□□□□ -0.36
LINC00404-201ENST00000418660 SOX15O60248 233 aa12.81□□□□□ -0.36
LINC00404-201ENST00000418660 TMEM127O75204 238 aa12.81□□□□□ -0.36
LINC00404-201ENST00000418660 RRASP10301 218 aa12.81□□□□□ -0.36
LINC00404-201ENST00000418660 CBX3Q13185 183 aa12.81□□□□□ -0.36
LINC00404-201ENST00000418660 BVESQ8NE79 360 aa12.81□□□□□ -0.36
LINC00404-201ENST00000418660 SLC25A38Q96DW6 304 aa12.81□□□□□ -0.36
LINC00404-201ENST00000418660 ADTRPQ96IZ2 230 aa12.81□□□□□ -0.36
LINC00404-201ENST00000418660 ZMAT5Q9UDW3 170 aaKnown RBP12.81□□□□□ -0.36
LINC00404-201ENST00000418660 A0A0A6YYH2 397 aa12.8□□□□□ -0.36
LINC00404-201ENST00000418660 A6NJ64 397 aa12.8□□□□□ -0.36
LINC00404-201ENST00000418660 K7EIL1 84 aa12.8□□□□□ -0.36
LINC00404-201ENST00000418660 TNFAIP8O95379 198 aa12.8□□□□□ -0.36
LINC00404-201ENST00000418660 IGLV2-23P01705 113 aa12.8□□□□□ -0.36
LINC00404-201ENST00000418660 CRYGBP07316 175 aa12.8□□□□□ -0.36
LINC00404-201ENST00000418660 DUTP33316 252 aaKnown RBP12.8□□□□□ -0.36
LINC00404-201ENST00000418660 RTL8BQ17RB0 113 aa12.8□□□□□ -0.36
LINC00404-201ENST00000418660 TMEM177Q53S58 311 aa12.8□□□□□ -0.36
LINC00404-201ENST00000418660 ACTBL2Q562R1 376 aa12.8□□□□□ -0.36
LINC00404-201ENST00000418660 PYHIN1Q6K0P9 492 aa12.8□□□□□ -0.36
LINC00404-201ENST00000418660 CNIH2Q6PI25 160 aa12.8□□□□□ -0.36
LINC00404-201ENST00000418660 UNQ5815/PRO19632Q6UWF5 114 aa12.8□□□□□ -0.36
LINC00404-201ENST00000418660 LFNGQ8NES3 379 aa12.8□□□□□ -0.36
LINC00404-201ENST00000418660 TSPAN14Q8NG11 270 aa12.8□□□□□ -0.36
LINC00404-201ENST00000418660 OR1N2Q8NGR9 330 aa12.8□□□□□ -0.36
LINC00404-201ENST00000418660 ARPC1AQ92747 370 aa12.8□□□□□ -0.36
LINC00404-201ENST00000418660 FAM103A1Q9BTL3 118 aaKnown RBP12.8□□□□□ -0.36
LINC00404-201ENST00000418660 VCX3AQ9NNX9 186 aa12.8□□□□□ -0.36
LINC00404-201ENST00000418660 TPSG1Q9NRR2 321 aa12.8□□□□□ -0.36
LINC00404-201ENST00000418660 OR2W1Q9Y3N9 320 aa12.8□□□□□ -0.36
LINC00404-201ENST00000418660 TRAV18A0A075B6X5 111 aa12.79□□□□□ -0.36
LINC00404-201ENST00000418660 WI2-2373I1.2A0A1W2PRP0 233 aa12.79□□□□□ -0.36
LINC00404-201ENST00000418660 SHOXO15266 292 aa12.79□□□□□ -0.36
LINC00404-201ENST00000418660 HLA-DQB1P01920 261 aa12.79□□□□□ -0.36
LINC00404-201ENST00000418660 LUMP51884 338 aaPredicted RBP12.79□□□□□ -0.36
LINC00404-201ENST00000418660 ZNF616Q08AN1 781 aa12.79□□□□□ -0.36
LINC00404-201ENST00000418660 FXYD3Q14802 87 aa12.79□□□□□ -0.36
LINC00404-201ENST00000418660 C9orf66Q5T8R8 295 aa12.79□□□□□ -0.36
LINC00404-201ENST00000418660 DDB2Q92466 427 aa12.79□□□□□ -0.36
LINC00404-201ENST00000418660 YIPF6Q96EC8 236 aa12.79□□□□□ -0.36
LINC00404-201ENST00000418660 HARBI1Q96MB7 349 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms