RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 NCR3LG1Q68D85 454 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 STX12Q86Y82 276 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 NEUROG1Q92886 237 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 ATP5SQ99766 215 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 ZNF251Q9BRH9 671 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 PARD6GQ9BYG4 376 aaPredicted RBP7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 HIPK2Q9H2X6 1198 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 DYNLRB1Q9NP97 96 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 KCNJ16Q9NPI9 418 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 STRAPQ9Y3F4 350 aaKnown RBP7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 PPIAL4AQ9Y536 164 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 PKD1L2Q7Z442 2459 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 SPTBN1Q01082 2364 aaKnown RBP7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 ZNF705EA8MWA4 302 aaPredicted RBP7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 SLC31A2O15432 143 aa7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 PPIHO43447 177 aaKnown RBP7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 NDUFA2O43678 99 aa7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 DFFBO76075 338 aa7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 LY86O95711 162 aa7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 HPRT1P00492 218 aa7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 GRNP28799 593 aaKnown RBP7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 DYNLT3P51808 116 aa7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 F2RL1P55085 397 aa7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 UBE2KP61086 200 aa7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 ZNF816Q0VGE8 651 aaPredicted RBP7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 CDSNQ15517 529 aa7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 POU2AF1Q16633 256 aa7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 PDLIM3Q53GG5 364 aaPredicted RBP7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 CT45A1Q5HYN5 189 aa7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 BTNL3Q6UXE8 466 aa7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 CLEC9AQ6UXN8 241 aa7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 TMEM14EPQ6UXP3 125 aa7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 SLC25A48Q6ZT89 311 aaKnown RBP7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 ZCCHC24Q8N2G6 241 aaKnown RBP7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 COMMD1Q8N668 190 aa7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 C8orf31Q8N9H6 132 aa7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 DEFB108BQ8NET1 73 aa7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 OR5C1Q8NGR4 320 aa7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 CT45A3Q8NHU0 189 aa7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 LINC01560Q8TB33 94 aa7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 ZNF596Q8TC21 504 aa7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 ADTRPQ96IZ2 230 aa7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 GAL3ST2Q9H3Q3 398 aa7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 SLC25A10Q9UBX3 287 aaPredicted RBP7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 TPRP12270 2363 aaKnown RBP7.46□□□□□ -1.22
LINCMD1-201ENST00000418518 SAA2-SAA4A0A096LPE2 208 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 IGHV1-69-2A0A0G2JMI3 117 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 MARCH11A6NNE9 402 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 UMAD1C9J7I0 102 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 M0R1X1 148 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 TMPRSS2O15393 492 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 FBXO24O75426 580 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 SCAF4O95104 1147 aaKnown RBP7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 PLAUP00749 431 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 OR8U8P0C7N1 319 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 SAA2P0DJI9 122 aaPredicted RBP7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 ATP6V0CP27449 155 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 G6PCP35575 357 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 THBS3P49746 956 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 DLX6P56179 175 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 C10orf91Q5T1B1 145 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 SP5Q6BEB4 398 aaPredicted RBP7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 FAM71F2Q6NXP2 309 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 HEPN1Q6WQI6 88 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 Q6ZRG5 221 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 HAPLN4Q86UW8 402 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 LINC00311Q8N616 119 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 ZNF525Q8N782 197 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 OR52E5Q8NH55 327 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 R3HDM4Q96D70 268 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 GNPNAT1Q96EK6 184 aaPredicted RBP7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 CIB3Q96Q77 187 aaPredicted RBP7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 RBKSQ9H477 322 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 C19orf12Q9NSK7 152 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 PSENENQ9NZ42 101 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 CISD1Q9NZ45 108 aaKnown RBP7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 CACFD1Q9UGQ2 172 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 PRELID3BQ9Y3B1 194 aa7.45□□□□□ -1.22
LINCMD1-201ENST00000418518 TNCP24821 2201 aa7.44□□□□□ -1.22
LINCMD1-201ENST00000418518 TRBV23-1A0A0A0MS06 115 aa7.44□□□□□ -1.22
LINCMD1-201ENST00000418518 MEX3AA1L020 520 aaKnown RBP7.44□□□□□ -1.22
LINCMD1-201ENST00000418518 CST7O76096 145 aa7.44□□□□□ -1.22
LINCMD1-201ENST00000418518 KRASP01116 189 aa7.44□□□□□ -1.22
LINCMD1-201ENST00000418518 IAPPP10997 89 aa7.44□□□□□ -1.22
LINCMD1-201ENST00000418518 DAOP14920 347 aa7.44□□□□□ -1.22
LINCMD1-201ENST00000418518 AGAP20933 346 aa7.44□□□□□ -1.22
LINCMD1-201ENST00000418518 OMGP23515 440 aa7.44□□□□□ -1.22
LINCMD1-201ENST00000418518 RPL31P62899 125 aaKnown RBP7.44□□□□□ -1.22
LINCMD1-201ENST00000418518 ZNF273Q14593 569 aa7.44□□□□□ -1.22
LINCMD1-201ENST00000418518 CLINT1Q14677 625 aa7.44□□□□□ -1.22
LINCMD1-201ENST00000418518 LTC4SQ16873 150 aa7.44□□□□□ -1.22
LINCMD1-201ENST00000418518 TUSC1Q2TAM9 212 aa7.44□□□□□ -1.22
LINCMD1-201ENST00000418518 RPL39P5Q59GN2 51 aa7.44□□□□□ -1.22
LINCMD1-201ENST00000418518 LRRC10Q5BKY1 277 aa7.44□□□□□ -1.22
LINCMD1-201ENST00000418518 OR2B11Q5JQS5 317 aa7.44□□□□□ -1.22
LINCMD1-201ENST00000418518 UTF1Q5T230 341 aa7.44□□□□□ -1.22
LINCMD1-201ENST00000418518 PRAMEF5Q5TYX0 476 aa7.44□□□□□ -1.22
LINCMD1-201ENST00000418518 C11orf71Q6IPW1 123 aa7.44□□□□□ -1.22
LINCMD1-201ENST00000418518 C1orf229Q6ZS94 237 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms