RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, human

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BDNF-208	ENST00000418212	EIF4E3	Q8N5X7	224 aa	Known RBP	11.31	□□□□□ -0.6
BDNF-208	ENST00000418212	OR52M1	Q8NGK5	317 aa		11.31	□□□□□ -0.6
BDNF-208	ENST00000418212	TMEM171	Q8WVE6	324 aa		11.31	□□□□□ -0.6
BDNF-208	ENST00000418212	TMEM54	Q969K7	222 aa		11.31	□□□□□ -0.6
BDNF-208	ENST00000418212		K7N7A8	449 aa		11.31	□□□□□ -0.6
BDNF-208	ENST00000418212	GNG4	P50150	75 aa		11.31	□□□□□ -0.6
BDNF-208	ENST00000418212	VKORC1L1	Q8N0U8	176 aa		11.31	□□□□□ -0.6
BDNF-208	ENST00000418212	FADS6	Q8N9I5	356 aa		11.31	□□□□□ -0.6
BDNF-208	ENST00000418212	OR4F17	Q8NGA8	305 aa		11.31	□□□□□ -0.6
BDNF-208	ENST00000418212	PINLYP	A6NC86	204 aa		11.31	□□□□□ -0.6
BDNF-208	ENST00000418212	F2RL2	O00254	374 aa		11.31	□□□□□ -0.6
BDNF-208	ENST00000418212	PGLYRP1	O75594	196 aa	Predicted RBP	11.31	□□□□□ -0.6
BDNF-208	ENST00000418212	MUC1	P15941	1255 aa	Predicted RBP	11.31	□□□□□ -0.6
BDNF-208	ENST00000418212	SSX7	Q7RTT5	188 aa		11.31	□□□□□ -0.6
BDNF-208	ENST00000418212	ZCCHC24	Q8N2G6	241 aa	Known RBP	11.31	□□□□□ -0.6
BDNF-208	ENST00000418212	SIRT7	Q9NRC8	400 aa		11.31	□□□□□ -0.6
BDNF-208	ENST00000418212	PTPRD	P23468	1912 aa		11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	SCN8A	Q9UQD0	1980 aa		11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	LOC102723996	A0A087X1L8	192 aa		11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	hCG_38984	A0A1B0GV85	526 aa		11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	PLAU	P00749	431 aa		11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	KIR2DS2	P43631	304 aa		11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	ARF6	P62330	175 aa		11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	OR1L8	Q8NGR8	309 aa		11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	HSF4	Q9ULV5	492 aa		11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	VCAN	P13611	3396 aa		11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	SYNGR3	O43761	229 aa		11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	ID4	P47928	161 aa		11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	KRTDAP	P60985	99 aa		11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	MYPOP	Q86VE0	399 aa	Predicted RBP	11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	C17orf82	Q86X59	251 aa	Predicted RBP	11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	OR8I2	Q8N0Y5	310 aa		11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	FAM210B	Q96KR6	192 aa		11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	ZNF714	Q96N38	554 aa		11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	THSD7B	Q9C0I4	1608 aa		11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	DOPEY1	Q5JWR5	2465 aa		11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	GOSR1	O95249	250 aa		11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	FAM157C	P0CG43	387 aa		11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	BRS3	P32247	399 aa		11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	WNT5A	P41221	380 aa		11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	PSG7	Q13046	419 aa		11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	ASPHD2	Q6ICH7	369 aa		11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	HIST1H2BA	Q96A08	127 aa		11.3	□□□□□ -0.6
BDNF-208	ENST00000418212	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	PROB1	E7EW31	1015 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	TGOLN2	O43493	480 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	CEACAM1	P13688	526 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	CD59	P13987	128 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	ZNF708	P17019	499 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	PMCH	P20382	165 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	ZNF818P	Q6ZRF7	136 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	SIGLECL1	Q8N7X8	197 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	ZBTB34	Q8NCN2	500 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	OR4X1	Q8NH49	305 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	GPR146	Q96CH1	333 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	DCTN5	Q9BTE1	182 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	CALY	Q9NYX4	217 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	PRND	Q9UKY0	176 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	NEURL1	O76050	574 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	GALR1	P47211	349 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	NAAA	Q02083	359 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	ECSCR	Q19T08	205 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	LINC00596	Q86U02	117 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	MARS2	Q96GW9	593 aa	Known RBP	11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	PKIB	Q9C010	78 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212		J3KRW8	73 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212		M0QZ24	198 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	SEC11B	P0C7V7	166 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	TMPRSS3	P57727	454 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	SLC35E3	Q7Z769	313 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	MRGPRG	Q86SM5	289 aa		11.29	□□□□□ -0.6
BDNF-208	ENST00000418212	MMP7	P09237	267 aa	Predicted RBP	11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	COX5B	P10606	129 aa		11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	MDK	P21741	143 aa	Predicted RBP	11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	DDT	P30046	118 aa		11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	FHIT	P49789	147 aa		11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	FAM222B	Q8WU58	562 aa		11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	SRD5A3	Q9H8P0	318 aa		11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	TRAPPC1	Q9Y5R8	145 aa		11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	NTN3	O00634	580 aa	Predicted RBP	11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	SUMO1	P63165	101 aa	Known RBP	11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	ACSF3	Q4G176	576 aa	Predicted RBP	11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	C9orf106	Q8NAJ2	232 aa		11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	TMEM18	Q96B42	140 aa		11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	SNX22	Q96L94	193 aa		11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	RALY	Q9UKM9	306 aa	Known RBP	11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	UNC80	Q8N2C7	3258 aa		11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	IGKV1-9	A0A0C4DH69	117 aa		11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	SLC25A17	O43808	307 aa		11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	HOXA6	P31267	233 aa		11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	SLC25A53	Q5H9E4	307 aa		11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	FGFBP3	Q8TAT2	258 aa		11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	ZNF586	Q9NXT0	402 aa		11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	CD1B	P29016	333 aa		11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	LGALS7	P47929	136 aa		11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	HIST1H3A	P68431	136 aa		11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	ZNF345	Q14585	488 aa		11.28	□□□□□ -0.6
BDNF-208	ENST00000418212		Q5PR19	223 aa		11.28	□□□□□ -0.6
BDNF-208	ENST00000418212	TEPP	Q6URK8	271 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms