RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 ATP6V1FQ16864 119 aa10.8□□□□□ -0.68
LRRTM1-205ENST00000417012 Q6P435 159 aa10.8□□□□□ -0.68
LRRTM1-205ENST00000417012 OR2T10Q8NGZ9 312 aa10.8□□□□□ -0.68
LRRTM1-205ENST00000417012 TMEM18Q96B42 140 aa10.8□□□□□ -0.68
LRRTM1-205ENST00000417012 WASF3Q9UPY6 502 aa10.8□□□□□ -0.68
LRRTM1-205ENST00000417012 CA6P23280 308 aa10.8□□□□□ -0.68
LRRTM1-205ENST00000417012 CEACAM6P40199 344 aa10.8□□□□□ -0.68
LRRTM1-205ENST00000417012 PDLIM4P50479 330 aa10.8□□□□□ -0.68
LRRTM1-205ENST00000417012 ZNF497Q6ZNH5 498 aa10.8□□□□□ -0.68
LRRTM1-205ENST00000417012 TMEM37Q8WXS4 190 aa10.8□□□□□ -0.68
LRRTM1-205ENST00000417012 TP53TG5Q9Y2B4 290 aa10.8□□□□□ -0.68
LRRTM1-205ENST00000417012 EP300Q09472 2414 aaPredicted RBP10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 TNFSF15O95150 251 aa10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 COX5AP20674 150 aa10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 ACTL10Q5JWF8 245 aa10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 FFAR4Q5NUL3 377 aa10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 PLA2G2CQ5R387 149 aa10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 KCNIP4Q6PIL6 250 aa10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 APH1AQ96BI3 265 aa10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 NEIL1Q96FI4 390 aaPredicted RBP10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 HSPB7Q9UBY9 170 aa10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 CACNA1HO95180 2353 aa10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 A0A1W2PR80 420 aa10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 SRP14P37108 136 aaKnown RBP10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 PLGLB1Q02325 96 aa10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 COTL1Q14019 142 aa10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 MRPL41Q8IXM3 137 aaKnown RBP10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 TMEM251Q8N6I4 163 aa10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 ZNF709Q8N972 641 aa10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 GGCTO75223 188 aaKnown RBP10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 VENTXO95231 258 aa10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 OR2H2O95918 312 aa10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 SLC10A1Q14973 349 aa10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 HES3Q5TGS1 186 aa10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 CISD2Q8N5K1 135 aaKnown RBP10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 BEND2Q8NDZ0 799 aa10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 OR10P1Q8NGE3 313 aa10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 DTD1Q8TEA8 209 aa10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 GATAD1Q8WUU5 269 aa10.79□□□□□ -0.68
LRRTM1-205ENST00000417012 PAGE4O60829 102 aa10.78□□□□□ -0.68
LRRTM1-205ENST00000417012 KRASP01116 189 aa10.78□□□□□ -0.68
LRRTM1-205ENST00000417012 SNRPCP09234 159 aaKnown RBP10.78□□□□□ -0.68
LRRTM1-205ENST00000417012 MYPOPQ86VE0 399 aaPredicted RBP10.78□□□□□ -0.68
LRRTM1-205ENST00000417012 OR6C3Q9NZP0 311 aa10.78□□□□□ -0.68
LRRTM1-205ENST00000417012 B4GALT7Q9UBV7 327 aa10.78□□□□□ -0.68
LRRTM1-205ENST00000417012 CLN8Q9UBY8 286 aa10.78□□□□□ -0.68
LRRTM1-205ENST00000417012 TYMSP04818 313 aa10.78□□□□□ -0.68
LRRTM1-205ENST00000417012 CCKARP32238 428 aa10.78□□□□□ -0.68
LRRTM1-205ENST00000417012 WNT5AP41221 380 aa10.78□□□□□ -0.68
LRRTM1-205ENST00000417012 GNG10P50151 68 aa10.78□□□□□ -0.68
LRRTM1-205ENST00000417012 PMP22Q01453 160 aa10.78□□□□□ -0.68
LRRTM1-205ENST00000417012 MAJINQ3KP22 176 aa10.78□□□□□ -0.68
LRRTM1-205ENST00000417012 Q8IYB0 196 aa10.78□□□□□ -0.68
LRRTM1-205ENST00000417012 RTL8AQ9BWD3 113 aa10.78□□□□□ -0.68
LRRTM1-205ENST00000417012 C21orf140B9A014 251 aa10.77□□□□□ -0.68
LRRTM1-205ENST00000417012 G6PCP35575 357 aa10.77□□□□□ -0.68
LRRTM1-205ENST00000417012 PLA2G5P39877 138 aa10.77□□□□□ -0.68
LRRTM1-205ENST00000417012 ESPL1Q14674 2120 aa10.77□□□□□ -0.68
LRRTM1-205ENST00000417012 IQCJQ1A5X6 159 aa10.77□□□□□ -0.68
LRRTM1-205ENST00000417012 OR5T1Q8NG75 326 aa10.77□□□□□ -0.68
LRRTM1-205ENST00000417012 POLDIP2Q9Y2S7 368 aa10.77□□□□□ -0.68
LRRTM1-205ENST00000417012 KMT2EQ8IZD2 1858 aa10.77□□□□□ -0.69
LRRTM1-205ENST00000417012 RAC2P15153 192 aa10.77□□□□□ -0.69
LRRTM1-205ENST00000417012 TFF3Q07654 80 aa10.77□□□□□ -0.69
LRRTM1-205ENST00000417012 SPATA46Q5T0L3 261 aa10.77□□□□□ -0.69
LRRTM1-205ENST00000417012 ZNF645Q8N7E2 425 aa10.77□□□□□ -0.69
LRRTM1-205ENST00000417012 NPCDR1Q9BY65 106 aa10.77□□□□□ -0.69
LRRTM1-205ENST00000417012 C12orf49Q9H741 205 aa10.77□□□□□ -0.69
LRRTM1-205ENST00000417012 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.77□□□□□ -0.69
LRRTM1-205ENST00000417012 MBNL3Q9NUK0 354 aaKnown RBP10.77□□□□□ -0.69
LRRTM1-205ENST00000417012 ARHGAP21Q5T5U3 1957 aa10.77□□□□□ -0.69
LRRTM1-205ENST00000417012 LRRC30A6NM36 301 aa10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 PRSS47A8MTI9 375 aa10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 C11orf94C9JXX5 98 aa10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 RAMP3O60896 148 aa10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 CNN1P51911 297 aaKnown RBP10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 RAB4BP61018 213 aa10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 ZNF816Q0VGE8 651 aaPredicted RBP10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 IGFBP7Q16270 282 aa10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 OR2D2Q9H210 308 aa10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 ODAMA1E959 279 aa10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 C17orf112F2Z3M2 114 aa10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 IL18BPO95998 194 aa10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 MEOX1P50221 254 aa10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 LCN2P80188 198 aa10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 CATR1Q13166 79 aa10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 NUFIP2Q7Z417 695 aaKnown RBP10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 VASH2Q86V25 355 aa10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 ZBTB34Q8NCN2 500 aa10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 CIB3Q96Q77 187 aaPredicted RBP10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 DEFB127Q9H1M4 99 aa10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 KCNIP1Q9NZI2 227 aa10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 ABI3Q9P2A4 366 aa10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 NXPH2O95156 264 aa10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 CHRNA7P36544 502 aa10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 CDC34P49427 236 aaPredicted RBP10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 PPP1CBP62140 327 aa10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 PAX5Q02548 391 aa10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 BTF3L4Q96K17 158 aa10.76□□□□□ -0.69
LRRTM1-205ENST00000417012 WIPI2Q9Y4P8 454 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms