RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 ARL6IP6Q8N6S5 226 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 OR5A2Q8NGI9 324 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 RNF122Q9H9V4 155 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 WNK1Q9H4A3 2382 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 A0A1B0GTI1 187 aa11.1□□□□□ -0.63
SCN1B-202ENST00000415950 H3BVH4 76 aa11.1□□□□□ -0.63
SCN1B-202ENST00000415950 GDF9O60383 454 aa11.1□□□□□ -0.63
SCN1B-202ENST00000415950 CD1BP29016 333 aa11.1□□□□□ -0.63
SCN1B-202ENST00000415950 DGAT2L7PQ6IED9 249 aa11.1□□□□□ -0.63
SCN1B-202ENST00000415950 LINC00114Q6XXX2 140 aa11.1□□□□□ -0.63
SCN1B-202ENST00000415950 TRAV38-1A0A0B4J264 116 aa11.1□□□□□ -0.63
SCN1B-202ENST00000415950 SYNGR1O43759 233 aa11.1□□□□□ -0.63
SCN1B-202ENST00000415950 LRRK1Q38SD2 2015 aa11.1□□□□□ -0.63
SCN1B-202ENST00000415950 ZNF716A6NP11 495 aa11.1□□□□□ -0.63
SCN1B-202ENST00000415950 CYB5R3P00387 301 aaPredicted RBP11.1□□□□□ -0.63
SCN1B-202ENST00000415950 TMUB1Q9BVT8 246 aa11.1□□□□□ -0.63
SCN1B-202ENST00000415950 RBKSQ9H477 322 aa11.1□□□□□ -0.63
SCN1B-202ENST00000415950 TCFL5Q9UL49 500 aa11.1□□□□□ -0.63
SCN1B-202ENST00000415950 CEBPDP49716 269 aaPredicted RBP11.1□□□□□ -0.63
SCN1B-202ENST00000415950 SSPNQ14714 243 aa11.1□□□□□ -0.63
SCN1B-202ENST00000415950 TMEM108Q6UXF1 575 aa11.1□□□□□ -0.63
SCN1B-202ENST00000415950 TMEM208Q9BTX3 173 aa11.1□□□□□ -0.63
SCN1B-202ENST00000415950 METTL1Q9UBP6 276 aaKnown RBP11.1□□□□□ -0.63
SCN1B-202ENST00000415950 IGSF23A1L1A6 192 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 OR4C46A6NHA9 309 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 CXorf1O96002 111 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 OR4A8P0C604 315 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 RELBQ01201 579 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 FXYD3Q14802 87 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 OR4A47Q6IF82 309 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 ZNF826PQ6ZT77 177 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 ZDHHC16Q969W1 377 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 ZPBPQ9BS86 351 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 TMEM222Q9H0R3 208 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 TNFRSF19Q9NS68 423 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 USF3Q68DE3 2245 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 OR2T8A6NH00 312 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 PITX3O75364 302 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 C10orf113Q5VZT2 155 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 SMIM12Q96EX1 92 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 IGHV3-72A0A0B4J1Y9 119 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 TIAF1O95411 115 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 CLDN14O95500 239 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 HSPB1P04792 205 aaKnown RBP11.09□□□□□ -0.63
SCN1B-202ENST00000415950 ADCYAP1P18509 176 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 RPL30P62888 115 aaKnown RBP11.09□□□□□ -0.63
SCN1B-202ENST00000415950 RAB37Q96AX2 223 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 GPR146Q96CH1 333 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 SF3B5Q9BWJ5 86 aaKnown RBP11.09□□□□□ -0.63
SCN1B-202ENST00000415950 MRPL37Q9BZE1 423 aaKnown RBP11.09□□□□□ -0.63
SCN1B-202ENST00000415950 FAM117AQ9C073 453 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 AP5S1Q9NUS5 200 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 THYN1Q9P016 225 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 PATJQ8NI35 1801 aa11.09□□□□□ -0.63
SCN1B-202ENST00000415950 PATE3B3GLJ2 98 aa11.08□□□□□ -0.63
SCN1B-202ENST00000415950 K7ERU9 68 aa11.08□□□□□ -0.63
SCN1B-202ENST00000415950 SERF2P84101 59 aa11.08□□□□□ -0.63
SCN1B-202ENST00000415950 MIC13Q5XKP0 118 aa11.08□□□□□ -0.63
SCN1B-202ENST00000415950 ZNF841Q6ZN19 808 aa11.08□□□□□ -0.63
SCN1B-202ENST00000415950 WDR31Q8NA23 367 aa11.08□□□□□ -0.63
SCN1B-202ENST00000415950 VSTM2AQ8TAG5 236 aa11.08□□□□□ -0.63
SCN1B-202ENST00000415950 CT55Q8WUE5 264 aa11.08□□□□□ -0.63
SCN1B-202ENST00000415950 ZNF501Q96CX3 271 aaPredicted RBP11.08□□□□□ -0.63
SCN1B-202ENST00000415950 ADTRPQ96IZ2 230 aa11.08□□□□□ -0.63
SCN1B-202ENST00000415950 PXMP4Q9Y6I8 212 aa11.08□□□□□ -0.63
SCN1B-202ENST00000415950 IGKV3-11P04433 115 aa11.08□□□□□ -0.64
SCN1B-202ENST00000415950 SSTR5P35346 364 aa11.08□□□□□ -0.64
SCN1B-202ENST00000415950 SPEM2Q0P670 501 aa11.08□□□□□ -0.64
SCN1B-202ENST00000415950 ZNF658BQ4V348 819 aaPredicted RBP11.08□□□□□ -0.64
SCN1B-202ENST00000415950 LBHQ53QV2 105 aaPredicted RBP11.08□□□□□ -0.64
SCN1B-202ENST00000415950 ZNF818PQ6ZRF7 136 aa11.08□□□□□ -0.64
SCN1B-202ENST00000415950 CRIPAKQ8N1N5 446 aa11.08□□□□□ -0.64
SCN1B-202ENST00000415950 OR1P1Q8NH06 330 aa11.08□□□□□ -0.64
SCN1B-202ENST00000415950 VWCEQ96DN2 955 aa11.08□□□□□ -0.64
SCN1B-202ENST00000415950 ASCL3Q9NQ33 180 aa11.08□□□□□ -0.64
SCN1B-202ENST00000415950 IGHV3-48P01763 117 aa11.08□□□□□ -0.64
SCN1B-202ENST00000415950 RIGQ13278 110 aa11.08□□□□□ -0.64
SCN1B-202ENST00000415950 TMEM187Q14656 261 aa11.08□□□□□ -0.64
SCN1B-202ENST00000415950 MDP1Q86V88 176 aa11.08□□□□□ -0.64
SCN1B-202ENST00000415950 Q8WTZ3 238 aa11.08□□□□□ -0.64
SCN1B-202ENST00000415950 IL19Q9UHD0 177 aa11.08□□□□□ -0.64
SCN1B-202ENST00000415950 COLCA2A8K830 154 aa11.08□□□□□ -0.64
SCN1B-202ENST00000415950 COX19Q49B96 90 aa11.08□□□□□ -0.64
SCN1B-202ENST00000415950 KRTCAP3Q53RY4 240 aa11.08□□□□□ -0.64
SCN1B-202ENST00000415950 SLC25A47Q6Q0C1 308 aa11.08□□□□□ -0.64
SCN1B-202ENST00000415950 FGF11Q92914 225 aa11.08□□□□□ -0.64
SCN1B-202ENST00000415950 C10orf35Q96D05 121 aa11.08□□□□□ -0.64
SCN1B-202ENST00000415950 PLXND1Q9Y4D7 1925 aa11.08□□□□□ -0.64
SCN1B-202ENST00000415950 H3BTX0 84 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 HIST1H1EP10412 219 aaKnown RBP11.07□□□□□ -0.64
SCN1B-202ENST00000415950 ACP1P24666 158 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 CD81P60033 236 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 CCL8P80075 99 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 PRNTQ86SH4 94 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 ZNF738Q8NE65 137 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 EAF1Q96JC9 268 aaPredicted RBP11.07□□□□□ -0.64
SCN1B-202ENST00000415950 SMIM8Q96KF7 97 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 RASL11BQ9BPW5 248 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 COA4Q9NYJ1 87 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 INSIG2Q9Y5U4 225 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms