RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 KDM4DQ6B0I6 523 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 TRAPPC6BQ86SZ2 158 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 SVOPQ8N4V2 548 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 ZNF383Q8NA42 475 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 OR1L6Q8NGR2 347 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 NIPSNAP1Q9BPW8 284 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 TMED9Q9BVK6 235 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 FAT4Q6V0I7 4981 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 MPTX1A8MV57 137 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 FCN1O00602 326 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 RAP2AP10114 183 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 MTCP1P56278 107 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 ATP5G2Q06055 141 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 C9orf152Q5JTZ5 239 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 BSCL2Q96G97 398 aaPredicted RBP4.33□□□□□ -1.72
LMBR1-204ENST00000415428 ATP6V1G3Q96LB4 118 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 NDUFAF3Q9BU61 184 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 CHST6Q9GZX3 395 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 MAGT1Q9H0U3 335 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 SCRT2Q9NQ03 307 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 ADAM30Q9UKF2 790 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 NCBP2LA6PVI3 153 aaKnown RBP4.32□□□□□ -1.72
LMBR1-204ENST00000415428 FUT3P21217 361 aa4.32□□□□□ -1.72
LMBR1-204ENST00000415428 EDDM3AQ14507 147 aa4.32□□□□□ -1.72
LMBR1-204ENST00000415428 RPEL1Q2QD12 228 aa4.32□□□□□ -1.72
LMBR1-204ENST00000415428 TTC32Q5I0X7 151 aa4.32□□□□□ -1.72
LMBR1-204ENST00000415428 UNQ5815/PRO19632Q6UWF5 114 aa4.32□□□□□ -1.72
LMBR1-204ENST00000415428 OR9Q2Q8NGE9 314 aa4.32□□□□□ -1.72
LMBR1-204ENST00000415428 FGF20Q9NP95 211 aaPredicted RBP4.32□□□□□ -1.72
LMBR1-204ENST00000415428 SAC3D1A6NKF1 404 aa4.32□□□□□ -1.72
LMBR1-204ENST00000415428 CGB1A6NKQ9 187 aa4.32□□□□□ -1.72
LMBR1-204ENST00000415428 ZNF736B4DX44 427 aaPredicted RBP4.32□□□□□ -1.72
LMBR1-204ENST00000415428 AIPO00170 330 aa4.32□□□□□ -1.72
LMBR1-204ENST00000415428 TRBV12-3P01733 135 aa4.32□□□□□ -1.72
LMBR1-204ENST00000415428 DLK1P80370 383 aa4.32□□□□□ -1.72
LMBR1-204ENST00000415428 AARDQ4LEZ3 155 aa4.32□□□□□ -1.72
LMBR1-204ENST00000415428 RBM48Q5RL73 367 aaKnown RBP4.32□□□□□ -1.72
LMBR1-204ENST00000415428 SSX6Q7RTT6 188 aa4.32□□□□□ -1.72
LMBR1-204ENST00000415428 OR10G2Q8NGC3 310 aa4.32□□□□□ -1.72
LMBR1-204ENST00000415428 KCNG3Q8TAE7 436 aa4.32□□□□□ -1.72
LMBR1-204ENST00000415428 UBALD1Q8TB05 177 aa4.32□□□□□ -1.72
LMBR1-204ENST00000415428 GIPC3Q8TF64 312 aa4.32□□□□□ -1.72
LMBR1-204ENST00000415428 ABHD14BQ96IU4 210 aa4.32□□□□□ -1.72
LMBR1-204ENST00000415428 BET1LQ9NYM9 111 aa4.32□□□□□ -1.72
LMBR1-204ENST00000415428 MEIKINA0A087WXM9 373 aa4.31□□□□□ -1.72
LMBR1-204ENST00000415428 A0A0B4J203 849 aa4.31□□□□□ -1.72
LMBR1-204ENST00000415428 SLC22A5O76082 557 aa4.31□□□□□ -1.72
LMBR1-204ENST00000415428 GBX2P52951 348 aaPredicted RBP4.31□□□□□ -1.72
LMBR1-204ENST00000415428 PTGES3Q15185 160 aaKnown RBP4.31□□□□□ -1.72
LMBR1-204ENST00000415428 MEDAGQ5VYS4 303 aa4.31□□□□□ -1.72
LMBR1-204ENST00000415428 THEM6Q8WUY1 208 aa4.31□□□□□ -1.72
LMBR1-204ENST00000415428 FAM162AQ96A26 154 aa4.31□□□□□ -1.72
LMBR1-204ENST00000415428 METTL9Q9H1A3 318 aa4.31□□□□□ -1.72
LMBR1-204ENST00000415428 IMPAD1Q9NX62 359 aa4.31□□□□□ -1.72
LMBR1-204ENST00000415428 LINC00527Q9UJ94 153 aa4.31□□□□□ -1.72
LMBR1-204ENST00000415428 TCRBV3S1A0A5B6 114 aa4.31□□□□□ -1.72
LMBR1-204ENST00000415428 C16orf90A8MZG2 172 aa4.31□□□□□ -1.72
LMBR1-204ENST00000415428 S1PR2O95136 353 aa4.31□□□□□ -1.72
LMBR1-204ENST00000415428 KRT8P05787 483 aa4.31□□□□□ -1.72
LMBR1-204ENST00000415428 PIPP12273 146 aaPredicted RBP4.31□□□□□ -1.72
LMBR1-204ENST00000415428 TPRX1Q8N7U7 411 aa4.31□□□□□ -1.72
LMBR1-204ENST00000415428 BBS1Q8NFJ9 593 aa4.31□□□□□ -1.72
LMBR1-204ENST00000415428 OR52N1Q8NH53 320 aa4.31□□□□□ -1.72
LMBR1-204ENST00000415428 LINC00467Q9BRT7 94 aa4.31□□□□□ -1.72
LMBR1-204ENST00000415428 GMPR2Q9P2T1 348 aaKnown RBP4.31□□□□□ -1.72
LMBR1-204ENST00000415428 RAB25P57735 213 aa4.31□□□□□ -1.72
LMBR1-204ENST00000415428 NANOS3P60323 173 aaKnown RBP4.31□□□□□ -1.72
LMBR1-204ENST00000415428 GINS1Q14691 196 aa4.31□□□□□ -1.72
LMBR1-204ENST00000415428 FXYD3Q14802 87 aa4.31□□□□□ -1.72
LMBR1-204ENST00000415428 FAM53AQ6NSI3 398 aaPredicted RBP4.31□□□□□ -1.72
LMBR1-204ENST00000415428 ADGRG5Q8IZF4 528 aa4.31□□□□□ -1.72
LMBR1-204ENST00000415428 NKAIN3Q8N8D7 197 aa4.31□□□□□ -1.72
LMBR1-204ENST00000415428 EEF1AKMT3Q96AZ1 226 aa4.31□□□□□ -1.72
LMBR1-204ENST00000415428 CMTM5Q96DZ9 223 aa4.31□□□□□ -1.72
LMBR1-204ENST00000415428 TEX12Q9BXU0 123 aa4.31□□□□□ -1.72
LMBR1-204ENST00000415428 A0A1W2PQL4 384 aaPredicted RBP4.3□□□□□ -1.72
LMBR1-204ENST00000415428 HES1Q14469 280 aa4.3□□□□□ -1.72
LMBR1-204ENST00000415428 FAM106AQ4KMX7 169 aa4.3□□□□□ -1.72
LMBR1-204ENST00000415428 SYT8Q8NBV8 401 aa4.3□□□□□ -1.72
LMBR1-204ENST00000415428 ARL11Q969Q4 196 aa4.3□□□□□ -1.72
LMBR1-204ENST00000415428 MRPL48Q96GC5 212 aaKnown RBP4.3□□□□□ -1.72
LMBR1-204ENST00000415428 C5orf30Q96GV9 206 aa4.3□□□□□ -1.72
LMBR1-204ENST00000415428 KRTAP9-6A0A140TA67 174 aa4.3□□□□□ -1.72
LMBR1-204ENST00000415428 A0A1B0GW64 132 aa4.3□□□□□ -1.72
LMBR1-204ENST00000415428 PDCD6O75340 191 aa4.3□□□□□ -1.72
LMBR1-204ENST00000415428 HTR3BO95264 441 aa4.3□□□□□ -1.72
LMBR1-204ENST00000415428 MAGOHP61326 146 aaKnown RBP4.3□□□□□ -1.72
LMBR1-204ENST00000415428 RPS16P62249 146 aaKnown RBP4.3□□□□□ -1.72
LMBR1-204ENST00000415428 TNP2Q05952 138 aa4.3□□□□□ -1.72
LMBR1-204ENST00000415428 Q5VSD8 79 aa4.3□□□□□ -1.72
LMBR1-204ENST00000415428 OR6K6Q8NGW6 343 aa4.3□□□□□ -1.72
LMBR1-204ENST00000415428 GPR148Q8TDV2 347 aa4.3□□□□□ -1.72
LMBR1-204ENST00000415428 GSTK1Q9Y2Q3 226 aa4.3□□□□□ -1.72
LMBR1-204ENST00000415428 MRPS16Q9Y3D3 137 aaKnown RBP4.3□□□□□ -1.72
LMBR1-204ENST00000415428 AGRNO00468 2067 aa4.3□□□□□ -1.72
LMBR1-204ENST00000415428 TRBV6-7A0A0A0MS04 114 aa4.3□□□□□ -1.72
LMBR1-204ENST00000415428 NANOS2P60321 138 aaKnown RBP4.3□□□□□ -1.72
LMBR1-204ENST00000415428 ATXN7L3Q14CW9 347 aaPredicted RBP4.3□□□□□ -1.72
LMBR1-204ENST00000415428 YIF1BQ5BJH7 314 aa4.3□□□□□ -1.72
LMBR1-204ENST00000415428 LCE2AQ5TA79 106 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms