RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 MPIP34949 423 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 SULT1A2P50226 295 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 FABP6P51161 128 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 VSX2P58304 361 aaPredicted RBP1.89□□□□□ -2.11
MCF2-204ENST00000414978 CDK6Q00534 326 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 RELAQ04206 551 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 SMAGPQ0VAQ4 97 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 PON3Q15166 354 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 CEACAM16Q2WEN9 425 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 TMEM30BQ3MIR4 351 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 DEFB134Q4QY38 66 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 TNFAIP8L2Q6P589 184 aaPredicted RBP1.89□□□□□ -2.11
MCF2-204ENST00000414978 TTC33Q6PID6 262 aaPredicted RBP1.89□□□□□ -2.11
MCF2-204ENST00000414978 TMUB2Q71RG4 321 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 VN1R4Q7Z5H5 301 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 GALNT10Q86SR1 603 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 ARIH2OSQ8N7S6 290 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 OR1N2Q8NGR9 330 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 CYGBQ8WWM9 190 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 MAL2Q969L2 176 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 TMBIM1Q969X1 311 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 SLC35G5Q96KT7 338 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 OR2A5Q96R48 311 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 LINC01587Q99440 93 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 SMR3AQ99954 134 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 TMEM208Q9BTX3 173 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 C20orf85Q9H1P6 137 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 ASB4Q9Y574 426 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 F11RQ9Y624 299 aaKnown RBP1.89□□□□□ -2.11
MCF2-204ENST00000414978 NAV3Q8IVL0 2385 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 EXPH5Q8NEV8 1989 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 RTTNQ86VV8 2226 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 NOTCH2Q04721 2471 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 SCN3AQ9NY46 2000 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 IGLV8-61A0A075B6I0 122 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 A0A096LNT2 108 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 C4orf51C9J302 202 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 TRAF3IP2O43734 574 aaPredicted RBP1.89□□□□□ -2.11
MCF2-204ENST00000414978 C1QCP02747 245 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 ORM1P02763 201 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 KIR2DS2P43631 304 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 RGS6P49758 472 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 P2RY4P51582 365 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 ARPC4P59998 168 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 MLLT11Q13015 90 aaPredicted RBP1.89□□□□□ -2.11
MCF2-204ENST00000414978 CHRFAM7AQ494W8 412 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 SLC48A1Q6P1K1 146 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 SFXN4Q6P4A7 337 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 ZNF773Q6PK81 442 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 C6orf120Q7Z4R8 191 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 KRTAP19-1Q8IUB9 90 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 ZFP82Q8N141 532 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 C11orf72Q8NBR9 251 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 NECAP1Q8NC96 275 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 OR10W1Q8NGF6 305 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 OR5K1Q8NHB7 308 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 DTD1Q8TEA8 209 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 RNASE6Q93091 150 aaKnown RBP1.89□□□□□ -2.11
MCF2-204ENST00000414978 FXYD5Q96DB9 178 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 NIPSNAP1Q9BPW8 284 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 DOHHQ9BU89 302 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 AICDAQ9GZX7 198 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 CACYBPQ9HB71 228 aaKnown RBP1.89□□□□□ -2.11
MCF2-204ENST00000414978 TMEM27Q9HBJ8 222 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 PLGRKTQ9HBL7 147 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 EXD2Q9NVH0 621 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 DPM3Q9P2X0 92 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 FAM32AQ9Y421 112 aaKnown RBP1.89□□□□□ -2.11
MCF2-204ENST00000414978 ENPP4Q9Y6X5 453 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 ITPR3Q14573 2671 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 DIDO1Q9BTC0 2240 aaKnown RBP1.88□□□□□ -2.11
MCF2-204ENST00000414978 IGLV3-12A0A075B6K2 115 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 A0A1B0GTI1 187 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 C5orf63A6NC05 138 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 ZNF860A6NHJ4 632 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 GJE1A6NN92 205 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 H3BNH8 94 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 ACOX3O15254 700 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 OPN1SWP03999 348 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 CT45A6P0DMU7 189 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 CT45A5P0DMU8 189 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 CT45A7P0DMV0 189 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 ESDP10768 282 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 PPP1CAP62136 330 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 SELENOWP63302 87 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 HPCAP84074 193 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 DEFB110Q30KQ9 67 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 CT45A1Q5HYN5 189 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 HES5Q5TA89 166 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 C2orf66Q6UXQ4 117 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 ZNF493Q6ZR52 646 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 DOLPP1Q86YN1 238 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 LRRC25Q8N386 305 aaPredicted RBP1.88□□□□□ -2.11
MCF2-204ENST00000414978 ZNF555Q8NEP9 628 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 OR9A2Q8NGT5 310 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 OR10Z1Q8NGY1 313 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 CT45A3Q8NHU0 189 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 TEX47Q8TBZ9 253 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 RAB8BQ92930 207 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 YIPF5Q969M3 257 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms