RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 NFYAP23511 347 aaPredicted RBP7.94□□□□□ -1.14
NCKIPSD-202ENST00000413374 PSMB8P28062 276 aa7.94□□□□□ -1.14
NCKIPSD-202ENST00000413374 RAB9AP51151 201 aa7.94□□□□□ -1.14
NCKIPSD-202ENST00000413374 GNG2P59768 71 aa7.94□□□□□ -1.14
NCKIPSD-202ENST00000413374 GNB1P62873 340 aa7.94□□□□□ -1.14
NCKIPSD-202ENST00000413374 ZNF260Q3ZCT1 412 aa7.94□□□□□ -1.14
NCKIPSD-202ENST00000413374 KCTD21Q4G0X4 260 aa7.94□□□□□ -1.14
NCKIPSD-202ENST00000413374 HACD4Q5VWC8 232 aa7.94□□□□□ -1.14
NCKIPSD-202ENST00000413374 ZNF660Q6AZW8 331 aaPredicted RBP7.94□□□□□ -1.14
NCKIPSD-202ENST00000413374 PPP1R27Q86WC6 154 aa7.94□□□□□ -1.14
NCKIPSD-202ENST00000413374 FLYWCH2Q96CP2 140 aaKnown RBP7.94□□□□□ -1.14
NCKIPSD-202ENST00000413374 C5orf30Q96GV9 206 aa7.94□□□□□ -1.14
NCKIPSD-202ENST00000413374 MS4A10Q96PG2 267 aa7.94□□□□□ -1.14
NCKIPSD-202ENST00000413374 P2RX4Q99571 388 aa7.94□□□□□ -1.14
NCKIPSD-202ENST00000413374 ALX4Q9H161 411 aaPredicted RBP7.94□□□□□ -1.14
NCKIPSD-202ENST00000413374 TPSG1Q9NRR2 321 aa7.94□□□□□ -1.14
NCKIPSD-202ENST00000413374 RHBDL2Q9NX52 303 aa7.94□□□□□ -1.14
NCKIPSD-202ENST00000413374 DNAH3Q8TD57 4116 aa7.93□□□□□ -1.14
NCKIPSD-202ENST00000413374 WI2-2373I1.2A0A1W2PRP0 233 aa7.93□□□□□ -1.14
NCKIPSD-202ENST00000413374 SSX5O60225 188 aa7.93□□□□□ -1.14
NCKIPSD-202ENST00000413374 SOX15O60248 233 aa7.93□□□□□ -1.14
NCKIPSD-202ENST00000413374 RBBP9O75884 186 aa7.93□□□□□ -1.14
NCKIPSD-202ENST00000413374 PTHLHP12272 177 aa7.93□□□□□ -1.14
NCKIPSD-202ENST00000413374 PJVKQ0ZLH3 352 aa7.93□□□□□ -1.14
NCKIPSD-202ENST00000413374 KIAA0141Q14154 515 aaPredicted RBP7.93□□□□□ -1.14
NCKIPSD-202ENST00000413374 UNQ5815/PRO19632Q6UWF5 114 aa7.93□□□□□ -1.14
NCKIPSD-202ENST00000413374 REC114Q7Z4M0 266 aa7.93□□□□□ -1.14
NCKIPSD-202ENST00000413374 H1FOOQ8IZA3 346 aaPredicted RBP7.93□□□□□ -1.14
NCKIPSD-202ENST00000413374 ZNF491Q8N8L2 437 aa7.93□□□□□ -1.14
NCKIPSD-202ENST00000413374 RNF152Q8N8N0 203 aa7.93□□□□□ -1.14
NCKIPSD-202ENST00000413374 MINDY2Q8NBR6 621 aa7.93□□□□□ -1.14
NCKIPSD-202ENST00000413374 LFNGQ8NES3 379 aa7.93□□□□□ -1.14
NCKIPSD-202ENST00000413374 TSPAN14Q8NG11 270 aa7.93□□□□□ -1.14
NCKIPSD-202ENST00000413374 OR11H1Q8NG94 326 aa7.93□□□□□ -1.14
NCKIPSD-202ENST00000413374 OR1N2Q8NGR9 330 aa7.93□□□□□ -1.14
NCKIPSD-202ENST00000413374 GRPEL2Q8TAA5 225 aa7.93□□□□□ -1.14
NCKIPSD-202ENST00000413374 TSNAXQ99598 290 aaKnown RBP7.93□□□□□ -1.14
NCKIPSD-202ENST00000413374 RNF5Q99942 180 aa7.93□□□□□ -1.14
NCKIPSD-202ENST00000413374 TOLLIPQ9H0E2 274 aa7.93□□□□□ -1.14
NCKIPSD-202ENST00000413374 NUBP2Q9Y5Y2 271 aa7.93□□□□□ -1.14
NCKIPSD-202ENST00000413374 A0A087WXM4 84 aa7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 SRRM4A7MD48 611 aaKnown RBP7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 K7EIL1 84 aa7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 ARPC1BO15143 372 aaKnown RBP7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 SHOXO15266 292 aa7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 AIREO43918 545 aa7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 TUSC2O75896 110 aa7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 CNIH1O95406 144 aa7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 DUS4LO95620 317 aaKnown RBP7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 IGLV1-40P01703 118 aa7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 IGHV3-11P01762 117 aa7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 DTYMKP23919 212 aa7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 RPS19P39019 145 aaKnown RBP7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 LUMP51884 338 aaPredicted RBP7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 TMEM267Q0VDI3 215 aaPredicted RBP7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 FXYD3Q14802 87 aa7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 ARL6IP1Q15041 203 aa7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 SRSF7Q16629 238 aaKnown RBP eCLIP7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 ZNF562Q6V9R5 426 aa7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 PDPNQ86YL7 162 aa7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 GVQW1Q8N7I0 195 aa7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 OR5T1Q8NG75 326 aa7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 C4orf3Q8WVX3 66 aa7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 DPF1Q92782 380 aa7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 SLC25A38Q96DW6 304 aa7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 YIPF6Q96EC8 236 aa7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 DCUN1D5Q9BTE7 237 aa7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 ZNF355PQ9NSJ1 428 aa7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 VSIG4Q9Y279 399 aa7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 NOTCH1P46531 2555 aa7.92□□□□□ -1.14
NCKIPSD-202ENST00000413374 MEIS3P1A6NDR6 274 aa7.91□□□□□ -1.14
NCKIPSD-202ENST00000413374 LINC00473A8K010 186 aa7.91□□□□□ -1.14
NCKIPSD-202ENST00000413374 IGLV2-23P01705 113 aa7.91□□□□□ -1.14
NCKIPSD-202ENST00000413374 APELAP0DMC3 54 aa7.91□□□□□ -1.14
NCKIPSD-202ENST00000413374 SLC6A1P30531 599 aa7.91□□□□□ -1.14
NCKIPSD-202ENST00000413374 PITPNAQ00169 270 aa7.91□□□□□ -1.14
NCKIPSD-202ENST00000413374 TAGLNQ01995 201 aaKnown RBP7.91□□□□□ -1.14
NCKIPSD-202ENST00000413374 ACTBL2Q562R1 376 aa7.91□□□□□ -1.14
NCKIPSD-202ENST00000413374 OR2B11Q5JQS5 317 aa7.91□□□□□ -1.14
NCKIPSD-202ENST00000413374 CNIH2Q6PI25 160 aa7.91□□□□□ -1.14
NCKIPSD-202ENST00000413374 Q6ZS49 121 aa7.91□□□□□ -1.14
NCKIPSD-202ENST00000413374 OR5M8Q8NGP6 311 aa7.91□□□□□ -1.14
NCKIPSD-202ENST00000413374 ARPC1AQ92747 370 aa7.91□□□□□ -1.14
NCKIPSD-202ENST00000413374 UBE2E2Q96LR5 201 aa7.91□□□□□ -1.14
NCKIPSD-202ENST00000413374 HARBI1Q96MB7 349 aa7.91□□□□□ -1.14
NCKIPSD-202ENST00000413374 MCRIP2Q9BUT9 160 aaKnown RBP7.91□□□□□ -1.14
NCKIPSD-202ENST00000413374 DCSTAMPQ9H295 470 aa7.91□□□□□ -1.14
NCKIPSD-202ENST00000413374 FOXA2Q9Y261 457 aaPredicted RBP7.91□□□□□ -1.14
NCKIPSD-202ENST00000413374 PLXNB1O43157 2135 aa7.91□□□□□ -1.14
NCKIPSD-202ENST00000413374 IGKV1D-13A0A0B4J2D9 117 aa7.9□□□□□ -1.14
NCKIPSD-202ENST00000413374 SEC14L6B5MCN3 397 aa7.9□□□□□ -1.14
NCKIPSD-202ENST00000413374 I3L521 148 aa7.9□□□□□ -1.14
NCKIPSD-202ENST00000413374 FCGR3BO75015 233 aa7.9□□□□□ -1.14
NCKIPSD-202ENST00000413374 SCGNO76038 276 aa7.9□□□□□ -1.14
NCKIPSD-202ENST00000413374 TNFAIP8O95379 198 aa7.9□□□□□ -1.14
NCKIPSD-202ENST00000413374 CRYZL1O95825 349 aa7.9□□□□□ -1.14
NCKIPSD-202ENST00000413374 CRYGBP07316 175 aa7.9□□□□□ -1.14
NCKIPSD-202ENST00000413374 CTXN2P0C2S0 81 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms