RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 HEXA-AS1Q9H8Q6 139 aa9.51□□□□□ -0.89
PTPRF-204ENST00000412568 IGHV2OR16-5A0A0B4J2B6 119 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 SEC11BP0C7V7 166 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 CHRNB4P30926 498 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 THBS3P49746 956 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 LY6DQ14210 128 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 TMEM241Q24JQ0 296 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 ZNF880Q6PDB4 577 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 POC1AQ8NBT0 407 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 OR5B3Q8NH48 314 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 OR4S2Q8NH73 311 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 VAMP8Q9BV40 100 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 PNRC2Q9NPJ4 139 aaKnown RBP9.5□□□□□ -0.89
PTPRF-204ENST00000412568 TRAPPC1Q9Y5R8 145 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 IGKV1-27A0A075B6S5 117 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 TCAPO15273 167 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 OR10J4P0C629 311 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 CRYGSP22914 178 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 WNT5AP41221 380 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 HIST1H3AP68431 136 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 VMA21Q3ZAQ7 101 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 LILRB1Q8NHL6 650 aaPredicted RBP9.5□□□□□ -0.89
PTPRF-204ENST00000412568 HARBI1Q96MB7 349 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 RSG1Q9BU20 258 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 TM2D1Q9BX74 207 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 PKIBQ9C010 78 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 HSBP1O75506 76 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 IL18BPO95998 194 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 NTF4P34130 210 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 FHITP49789 147 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 SULT1A2P50226 295 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 UCNP55089 124 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 TNXAQ16473 311 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 KHDC1LQ5JSQ8 128 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 PRR27Q6MZM9 219 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 ATRAIDQ6UW56 229 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 FGFRL1Q8N441 504 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 RHOVQ96L33 236 aa9.5□□□□□ -0.89
PTPRF-204ENST00000412568 PACRGQ96M98 296 aaPredicted RBP9.5□□□□□ -0.89
PTPRF-204ENST00000412568 GALR1P47211 349 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 HNRNPA3P51991 378 aaKnown RBP9.49□□□□□ -0.89
PTPRF-204ENST00000412568 DLK1P80370 383 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 AARDQ4LEZ3 155 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 TGIF2LYQ8IUE0 185 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 TGIF2LXQ8IUE1 241 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 MARVELD3Q96A59 401 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 PARP11Q9NR21 331 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 MRPS18CQ9Y3D5 142 aaKnown RBP9.49□□□□□ -0.89
PTPRF-204ENST00000412568 ARL2-SNX15V9GYD0 113 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 ACSM6Q6P461 480 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 ATP5SQ99766 215 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 PCGF1Q9BSM1 259 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 HES4Q9HCC6 221 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 KCNIP2Q9NS61 270 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 OBSL1O75147 1896 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 KIAA1671Q9BY89 1806 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 DLL1O00548 723 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 LDLRAD4O15165 306 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 RBP4P02753 201 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 FGF2P09038 288 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 TMEM187Q14656 261 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 TIMM23BQ5SRD1 257 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 FAM216BQ8N7L0 139 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 CMTM2Q8TAZ6 248 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 GPR146Q96CH1 333 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 HILPDAQ9Y5L2 63 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 H3BQ15 152 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 IGHV3-48P01763 117 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 CT45A6P0DMU7 189 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 CT45A5P0DMU8 189 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 CT45A7P0DMV0 189 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 CT45A1Q5HYN5 189 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 TRAT1Q6PIZ9 186 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 CT45A3Q8NHU0 189 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 SFXN3Q9BWM7 321 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 AURKAIP1Q9NWT8 199 aaPredicted RBP9.49□□□□□ -0.89
PTPRF-204ENST00000412568 FBLN5Q9UBX5 448 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 INSIG2Q9Y5U4 225 aa9.49□□□□□ -0.89
PTPRF-204ENST00000412568 MALRD1Q5VYJ5 2156 aa9.48□□□□□ -0.89
PTPRF-204ENST00000412568 GAPDHP04406 335 aaKnown RBP9.48□□□□□ -0.89
PTPRF-204ENST00000412568 ADH4P08319 380 aa9.48□□□□□ -0.89
PTPRF-204ENST00000412568 CD40P25942 277 aa9.48□□□□□ -0.89
PTPRF-204ENST00000412568 KIR2DL2P43627 348 aaPredicted RBP9.48□□□□□ -0.89
PTPRF-204ENST00000412568 OR10G4Q8NGN3 311 aa9.48□□□□□ -0.89
PTPRF-204ENST00000412568 OR10G9Q8NGN4 311 aa9.48□□□□□ -0.89
PTPRF-204ENST00000412568 OR10G7Q8NGN6 311 aa9.48□□□□□ -0.89
PTPRF-204ENST00000412568 MARS2Q96GW9 593 aaKnown RBP9.48□□□□□ -0.89
PTPRF-204ENST00000412568 ABHD14AQ9BUJ0 271 aa9.48□□□□□ -0.89
PTPRF-204ENST00000412568 A0A1B0GU03 582 aa9.48□□□□□ -0.89
PTPRF-204ENST00000412568 H0YIZ8 118 aa9.48□□□□□ -0.89
PTPRF-204ENST00000412568 CCL1P22362 96 aa9.48□□□□□ -0.89
PTPRF-204ENST00000412568 BSPH1Q075Z2 132 aa9.48□□□□□ -0.89
PTPRF-204ENST00000412568 MRGPRGQ86SM5 289 aa9.48□□□□□ -0.89
PTPRF-204ENST00000412568 RPRMLQ8N4K4 120 aa9.48□□□□□ -0.89
PTPRF-204ENST00000412568 MDS2Q8NDY4 140 aa9.48□□□□□ -0.89
PTPRF-204ENST00000412568 TMEM230Q96A57 120 aa9.48□□□□□ -0.89
PTPRF-204ENST00000412568 PCNX3Q9H6A9 2034 aa9.48□□□□□ -0.89
PTPRF-204ENST00000412568 C12orf77C9JDV5 145 aa9.48□□□□□ -0.89
PTPRF-204ENST00000412568 GLRXP35754 106 aa9.48□□□□□ -0.89
PTPRF-204ENST00000412568 TPPP2P59282 170 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms