RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 CLEC7AQ9BXN2 247 aa15.77■□□□□ 0.12
HCG11-201ENST00000411553 OR5AC2Q9NZP5 309 aa15.77■□□□□ 0.12
HCG11-201ENST00000411553 PHLDA3Q9Y5J5 127 aa15.77■□□□□ 0.12
HCG11-201ENST00000411553 KBTBD11O94819 623 aa15.77■□□□□ 0.12
HCG11-201ENST00000411553 CD74P04233 296 aa15.77■□□□□ 0.12
HCG11-201ENST00000411553 HSPE1P61604 102 aaKnown RBP15.77■□□□□ 0.12
HCG11-201ENST00000411553 CYB561D1Q8N8Q1 229 aa15.77■□□□□ 0.12
HCG11-201ENST00000411553 FAM181AQ8N9Y4 354 aa15.77■□□□□ 0.12
HCG11-201ENST00000411553 WDR25Q64LD2 544 aaPredicted RBP15.77■□□□□ 0.12
HCG11-201ENST00000411553 PQLC2Q6ZP29 291 aa15.77■□□□□ 0.12
HCG11-201ENST00000411553 GPR132Q9UNW8 380 aa15.77■□□□□ 0.12
HCG11-201ENST00000411553 TPRP12270 2363 aaKnown RBP15.77■□□□□ 0.11
HCG11-201ENST00000411553 M0QZK8 103 aa15.77■□□□□ 0.11
HCG11-201ENST00000411553 GGCTO75223 188 aaKnown RBP15.77■□□□□ 0.11
HCG11-201ENST00000411553 MIC13Q5XKP0 118 aa15.77■□□□□ 0.11
HCG11-201ENST00000411553 DNM1P46Q6ZS02 220 aa15.77■□□□□ 0.11
HCG11-201ENST00000411553 CENPVQ7Z7K6 275 aaPredicted RBP15.77■□□□□ 0.11
HCG11-201ENST00000411553 TMEM186Q96B77 213 aa15.77■□□□□ 0.11
HCG11-201ENST00000411553 MOB4Q9Y3A3 225 aa15.77■□□□□ 0.11
HCG11-201ENST00000411553 ZNF638Q14966 1978 aaKnown RBP15.77■□□□□ 0.11
HCG11-201ENST00000411553 ZNF729A6NN14 1252 aaPredicted RBP15.77■□□□□ 0.11
HCG11-201ENST00000411553 DIRC3C9JPN6 131 aa15.77■□□□□ 0.11
HCG11-201ENST00000411553 QTRT1Q9BXR0 403 aaKnown RBP15.77■□□□□ 0.11
HCG11-201ENST00000411553 MCM3APO60318 1980 aa15.76■□□□□ 0.11
HCG11-201ENST00000411553 B9A039 149 aa15.76■□□□□ 0.11
HCG11-201ENST00000411553 FOXH1O75593 365 aa15.76■□□□□ 0.11
HCG11-201ENST00000411553 CFDP00746 253 aaPredicted RBP15.76■□□□□ 0.11
HCG11-201ENST00000411553 TMEM30BQ3MIR4 351 aa15.76■□□□□ 0.11
HCG11-201ENST00000411553 ZCCHC14Q8WYQ9 949 aaKnown RBP15.76■□□□□ 0.11
HCG11-201ENST00000411553 PLAURQ03405 335 aa15.76■□□□□ 0.11
HCG11-201ENST00000411553 LSM10Q969L4 123 aaKnown RBP15.76■□□□□ 0.11
HCG11-201ENST00000411553 GPR146Q96CH1 333 aa15.76■□□□□ 0.11
HCG11-201ENST00000411553 NUP214P35658 2090 aaPredicted RBP15.76■□□□□ 0.11
HCG11-201ENST00000411553 UBE2V2Q15819 145 aa15.76■□□□□ 0.11
HCG11-201ENST00000411553 TRAF4Q9BUZ4 470 aaPredicted RBP15.76■□□□□ 0.11
HCG11-201ENST00000411553 LOC101059948A0A1B0GTJ6 334 aa15.76■□□□□ 0.11
HCG11-201ENST00000411553 LMX1BO60663 402 aa15.76■□□□□ 0.11
HCG11-201ENST00000411553 PTGDSP41222 190 aa15.76■□□□□ 0.11
HCG11-201ENST00000411553 C1orf100Q5SVJ3 147 aa15.76■□□□□ 0.11
HCG11-201ENST00000411553 OR4C13Q8NGP0 309 aa15.76■□□□□ 0.11
HCG11-201ENST00000411553 FAM206AQ9NX38 181 aa15.76■□□□□ 0.11
HCG11-201ENST00000411553 PAM16Q9Y3D7 125 aa15.76■□□□□ 0.11
HCG11-201ENST00000411553 THY1P04216 161 aa15.75■□□□□ 0.11
HCG11-201ENST00000411553 TSPOP30536 169 aa15.75■□□□□ 0.11
HCG11-201ENST00000411553 CX3CL1P78423 397 aa15.75■□□□□ 0.11
HCG11-201ENST00000411553 RALYQ9UKM9 306 aaKnown RBP15.75■□□□□ 0.11
HCG11-201ENST00000411553 HLA-DQB1P01920 261 aa15.75■□□□□ 0.11
HCG11-201ENST00000411553 PF4P02776 101 aa15.75■□□□□ 0.11
HCG11-201ENST00000411553 MT-ND6P03923 174 aa15.75■□□□□ 0.11
HCG11-201ENST00000411553 TCTAP57738 103 aa15.75■□□□□ 0.11
HCG11-201ENST00000411553 RPS20P60866 119 aaKnown RBP15.75■□□□□ 0.11
HCG11-201ENST00000411553 TP53RKQ96S44 253 aa15.75■□□□□ 0.11
HCG11-201ENST00000411553 DNAJC4Q9NNZ3 241 aa15.75■□□□□ 0.11
HCG11-201ENST00000411553 TMEM74BQ9NUR3 256 aa15.75■□□□□ 0.11
HCG11-201ENST00000411553 FOXJ2Q9P0K8 574 aa15.75■□□□□ 0.11
HCG11-201ENST00000411553 FOXD3Q9UJU5 478 aaPredicted RBP15.75■□□□□ 0.11
HCG11-201ENST00000411553 FAM90A26D6RGX4 464 aa15.75■□□□□ 0.11
HCG11-201ENST00000411553 ANOS1P23352 680 aa15.75■□□□□ 0.11
HCG11-201ENST00000411553 SELENOHQ8IZQ5 122 aaKnown RBP15.75■□□□□ 0.11
HCG11-201ENST00000411553 TAF15Q92804 592 aaKnown RBP eCLIP15.75■□□□□ 0.11
HCG11-201ENST00000411553 LTBP4Q8N2S1 1624 aa15.75■□□□□ 0.11
HCG11-201ENST00000411553 PNKDQ8N490 385 aa15.75■□□□□ 0.11
HCG11-201ENST00000411553 EEF1AKMT3Q96AZ1 226 aa15.75■□□□□ 0.11
HCG11-201ENST00000411553 GALNT14Q96FL9 552 aa15.75■□□□□ 0.11
HCG11-201ENST00000411553 POM121Q96HA1 1249 aa15.75■□□□□ 0.11
HCG11-201ENST00000411553 ACAA1P09110 424 aaPredicted RBP15.74■□□□□ 0.11
HCG11-201ENST00000411553 RELQ04864 619 aaPredicted RBP15.74■□□□□ 0.11
HCG11-201ENST00000411553 PRSS8Q16651 343 aa15.74■□□□□ 0.11
HCG11-201ENST00000411553 CXorf66Q5JRM2 361 aaPredicted RBP15.74■□□□□ 0.11
HCG11-201ENST00000411553 DCAF12L2Q5VW00 463 aa15.74■□□□□ 0.11
HCG11-201ENST00000411553 LEAP2Q969E1 77 aa15.74■□□□□ 0.11
HCG11-201ENST00000411553 WNT5BQ9H1J7 359 aa15.74■□□□□ 0.11
HCG11-201ENST00000411553 IGKV3D-11A0A0A0MRZ8 115 aa15.74■□□□□ 0.11
HCG11-201ENST00000411553 C7orf66A4D0T2 115 aa15.74■□□□□ 0.11
HCG11-201ENST00000411553 LINC00862A6NCI5 91 aa15.74■□□□□ 0.11
HCG11-201ENST00000411553 GREM1O60565 184 aa15.74■□□□□ 0.11
HCG11-201ENST00000411553 IGKV3-11P04433 115 aa15.74■□□□□ 0.11
HCG11-201ENST00000411553 MARCH11A6NNE9 402 aa15.74■□□□□ 0.11
HCG11-201ENST00000411553 NPIPB11E5RHQ5 1161 aa15.74■□□□□ 0.11
HCG11-201ENST00000411553 C2orf83Q53S99 150 aa15.74■□□□□ 0.11
HCG11-201ENST00000411553 LINC01560Q8TB33 94 aa15.74■□□□□ 0.11
HCG11-201ENST00000411553 AQP3Q92482 292 aa15.74■□□□□ 0.11
HCG11-201ENST00000411553 PPP1R3EQ9H7J1 279 aa15.74■□□□□ 0.11
HCG11-201ENST00000411553 TMEM238LA0A1B0GVL6 79 aa15.73■□□□□ 0.11
HCG11-201ENST00000411553 A6NJY4 79 aa15.73■□□□□ 0.11
HCG11-201ENST00000411553 GPX1P07203 203 aa15.73■□□□□ 0.11
HCG11-201ENST00000411553 PRSS53Q2L4Q9 553 aa15.73■□□□□ 0.11
HCG11-201ENST00000411553 DPH3Q96FX2 82 aa15.73■□□□□ 0.11
HCG11-201ENST00000411553 COX6CP09669 75 aa15.73■□□□□ 0.11
HCG11-201ENST00000411553 ZNF250P15622 560 aa15.73■□□□□ 0.11
HCG11-201ENST00000411553 RAB9AP51151 201 aa15.73■□□□□ 0.11
HCG11-201ENST00000411553 ZNF256Q9Y2P7 627 aaPredicted RBP15.73■□□□□ 0.11
HCG11-201ENST00000411553 SHANK3Q9BYB0 1731 aa15.73■□□□□ 0.11
HCG11-201ENST00000411553 NUDT3O95989 172 aa15.73■□□□□ 0.11
HCG11-201ENST00000411553 CA2P00918 260 aa15.73■□□□□ 0.11
HCG11-201ENST00000411553 NPPCP23582 126 aa15.73■□□□□ 0.11
HCG11-201ENST00000411553 P2RY4P51582 365 aa15.73■□□□□ 0.11
HCG11-201ENST00000411553 CD81P60033 236 aa15.73■□□□□ 0.11
HCG11-201ENST00000411553 MEF2BQ02080 365 aaPredicted RBP15.73■□□□□ 0.11
HCG11-201ENST00000411553 IGHV3OR16-10A0A075B7F0 116 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms