RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 ODF3L1Q8IXM7 274 aa11.28□□□□□ -0.6
LIMS1-205ENST00000410093 BOLLQ8N9W6 283 aaKnown RBP11.28□□□□□ -0.6
LIMS1-205ENST00000410093 OR52E5Q8NH55 327 aa11.28□□□□□ -0.6
LIMS1-205ENST00000410093 PINX1Q96BK5 328 aaKnown RBP11.28□□□□□ -0.6
LIMS1-205ENST00000410093 ESRP2Q9H6T0 727 aaKnown RBP11.28□□□□□ -0.6
LIMS1-205ENST00000410093 CALYQ9NYX4 217 aa11.28□□□□□ -0.6
LIMS1-205ENST00000410093 CLN8Q9UBY8 286 aa11.28□□□□□ -0.6
LIMS1-205ENST00000410093 PSG11Q9UQ72 335 aa11.28□□□□□ -0.6
LIMS1-205ENST00000410093 TANC2Q9HCD6 1990 aa11.28□□□□□ -0.6
LIMS1-205ENST00000410093 SFTA3P0C7M3 94 aa11.27□□□□□ -0.61
LIMS1-205ENST00000410093 DUTP33316 252 aaKnown RBP11.27□□□□□ -0.61
LIMS1-205ENST00000410093 CD80P33681 288 aa11.27□□□□□ -0.61
LIMS1-205ENST00000410093 LOXL3P58215 753 aa11.27□□□□□ -0.61
LIMS1-205ENST00000410093 RPL30P62888 115 aaKnown RBP11.27□□□□□ -0.61
LIMS1-205ENST00000410093 MEF2CQ06413 473 aaPredicted RBP11.27□□□□□ -0.61
LIMS1-205ENST00000410093 TMEM14EPQ6UXP3 125 aa11.27□□□□□ -0.61
LIMS1-205ENST00000410093 UBALD1Q8TB05 177 aa11.27□□□□□ -0.61
LIMS1-205ENST00000410093 FAM213BQ8TBF2 198 aa11.27□□□□□ -0.61
LIMS1-205ENST00000410093 SH3BGRL3Q9H299 93 aa11.27□□□□□ -0.61
LIMS1-205ENST00000410093 SPENQ96T58 3664 aaKnown RBP11.27□□□□□ -0.61
LIMS1-205ENST00000410093 DSCAML1Q8TD84 2053 aa11.27□□□□□ -0.61
LIMS1-205ENST00000410093 hADV38S2A0JD32 116 aa11.26□□□□□ -0.61
LIMS1-205ENST00000410093 DPRXA6NFQ7 191 aa11.26□□□□□ -0.61
LIMS1-205ENST00000410093 SIGLEC5O15389 551 aa11.26□□□□□ -0.61
LIMS1-205ENST00000410093 PPIHO43447 177 aaKnown RBP11.26□□□□□ -0.61
LIMS1-205ENST00000410093 KRASP01116 189 aa11.26□□□□□ -0.61
LIMS1-205ENST00000410093 H2AFB1P0C5Y9 115 aa11.26□□□□□ -0.61
LIMS1-205ENST00000410093 OR4A8P0C604 315 aa11.26□□□□□ -0.61
LIMS1-205ENST00000410093 ADCYAP1P18509 176 aa11.26□□□□□ -0.61
LIMS1-205ENST00000410093 ASCL1P50553 236 aa11.26□□□□□ -0.61
LIMS1-205ENST00000410093 EDDM3BP56851 147 aa11.26□□□□□ -0.61
LIMS1-205ENST00000410093 ERVK-16P61578 105 aa11.26□□□□□ -0.61
LIMS1-205ENST00000410093 ADIPOQQ15848 244 aa11.26□□□□□ -0.61
LIMS1-205ENST00000410093 PDLIM3Q53GG5 364 aaPredicted RBP11.26□□□□□ -0.61
LIMS1-205ENST00000410093 DHRS7BQ6IAN0 325 aaPredicted RBP11.26□□□□□ -0.61
LIMS1-205ENST00000410093 WFDC8Q8IUA0 241 aa11.26□□□□□ -0.61
LIMS1-205ENST00000410093 ZNF295-AS1Q8N0V1 137 aa11.26□□□□□ -0.61
LIMS1-205ENST00000410093 PUSL1Q8N0Z8 303 aaKnown RBP11.26□□□□□ -0.61
LIMS1-205ENST00000410093 ZNF808Q8N4W9 903 aaPredicted RBP11.26□□□□□ -0.61
LIMS1-205ENST00000410093 TMEM217Q8N7C4 229 aa11.26□□□□□ -0.61
LIMS1-205ENST00000410093 CLCC1Q96S66 551 aa11.26□□□□□ -0.61
LIMS1-205ENST00000410093 AIFM2Q9BRQ8 373 aa11.26□□□□□ -0.61
LIMS1-205ENST00000410093 RBKSQ9H477 322 aa11.26□□□□□ -0.61
LIMS1-205ENST00000410093 KCNJ16Q9NPI9 418 aa11.26□□□□□ -0.61
LIMS1-205ENST00000410093 GFOD1Q9NXC2 390 aa11.26□□□□□ -0.61
LIMS1-205ENST00000410093 KIAA1456Q9P272 454 aa11.26□□□□□ -0.61
LIMS1-205ENST00000410093 FLNBO75369 2602 aaKnown RBP11.26□□□□□ -0.61
LIMS1-205ENST00000410093 UBR5O95071 2799 aaPredicted RBP11.26□□□□□ -0.61
LIMS1-205ENST00000410093 PRR14LQ5THK1 2151 aa11.26□□□□□ -0.61
LIMS1-205ENST00000410093 C17orf98A8MV24 154 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 FAM157AC9JC47 383 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 DNASE2O00115 360 aaPredicted RBP11.25□□□□□ -0.61
LIMS1-205ENST00000410093 RAMP3O60896 148 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 S1PR2O95136 353 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 THBS3P49746 956 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 BSPH1Q075Z2 132 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 LRRC75BQ2VPJ9 315 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 FBXL19-AS1Q494R0 122 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 CENPVQ7Z7K6 275 aaPredicted RBP11.25□□□□□ -0.61
LIMS1-205ENST00000410093 LILRB2Q8N423 598 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 ZNF525Q8N782 197 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 TPRX1Q8N7U7 411 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 ZNRF1Q8ND25 227 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 ST6GALNAC3Q8NDV1 305 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 RFESDQ8TAC1 157 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 RAB39BQ96DA2 213 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 GAFA1Q96PS6 74 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 S1PR3Q99500 378 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 EIF5A2Q9GZV4 153 aaKnown RBP11.25□□□□□ -0.61
LIMS1-205ENST00000410093 SLC35B3Q9H1N7 401 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 MS4A5Q9H3V2 200 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 DYSFO75923 2080 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 RELNP78509 3460 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 CACNA1DQ01668 2161 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 ZGRF1Q86YA3 2104 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 IGHV3OR15-7A0A075B7D8 119 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 MARCH11A6NNE9 402 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 ST8SIA5O15466 376 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 NDUFA2O43678 99 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 ZG16O60844 167 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 NDUFS6O75380 124 aaKnown RBP11.25□□□□□ -0.61
LIMS1-205ENST00000410093 MBP02144 154 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 THBDP07204 575 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 NQO2P16083 231 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 G6PCP35575 357 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 SRSF3P84103 164 aaKnown RBP11.25□□□□□ -0.61
LIMS1-205ENST00000410093 AKR1C1Q04828 323 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 ZNF816Q0VGE8 651 aaPredicted RBP11.25□□□□□ -0.61
LIMS1-205ENST00000410093 PMS2P11Q13670 270 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 OR4S2Q8NH73 311 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 R3HDM4Q96D70 268 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 C5orf30Q96GV9 206 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 ABHD14AQ9BUJ0 271 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 MS4A7Q9GZW8 240 aaPredicted RBP11.25□□□□□ -0.61
LIMS1-205ENST00000410093 GAL3ST2Q9H3Q3 398 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 IDI2-AS1Q9NZ38 188 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 LINC00312Q9Y6C7 94 aa11.25□□□□□ -0.61
LIMS1-205ENST00000410093 ASH1LQ9NR48 2969 aaKnown RBP11.24□□□□□ -0.61
LIMS1-205ENST00000410093 TSPAN4O14817 238 aa11.24□□□□□ -0.61
LIMS1-205ENST00000410093 IAPPP10997 89 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms