RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 NOS1APO75052 506 aaPredicted RBP3.34□□□□□ -1.87
LSM5-206ENST00000409987 MAS1P04201 325 aa3.34□□□□□ -1.87
LSM5-206ENST00000409987 OR5G3P0C626 314 aa3.34□□□□□ -1.87
LSM5-206ENST00000409987 CTSEP14091 401 aa3.34□□□□□ -1.87
LSM5-206ENST00000409987 NELFEP18615 380 aaKnown RBP3.34□□□□□ -1.87
LSM5-206ENST00000409987 MSNP26038 577 aaKnown RBP3.34□□□□□ -1.87
LSM5-206ENST00000409987 RPS10P46783 165 aaKnown RBP3.34□□□□□ -1.87
LSM5-206ENST00000409987 CDK9P50750 372 aaKnown RBP3.34□□□□□ -1.87
LSM5-206ENST00000409987 ZNF133P52736 654 aaPredicted RBP3.34□□□□□ -1.87
LSM5-206ENST00000409987 ESRRGP62508 458 aa3.34□□□□□ -1.87
LSM5-206ENST00000409987 RPS24P62847 133 aaKnown RBP3.34□□□□□ -1.87
LSM5-206ENST00000409987 IFITM2Q01629 132 aa3.34□□□□□ -1.87
LSM5-206ENST00000409987 ATP5G2Q06055 141 aa3.34□□□□□ -1.87
LSM5-206ENST00000409987 TRMT12Q53H54 448 aaKnown RBP3.34□□□□□ -1.87
LSM5-206ENST00000409987 ACSBG2Q5FVE4 666 aa3.34□□□□□ -1.87
LSM5-206ENST00000409987 LCN8Q6JVE9 175 aa3.34□□□□□ -1.87
LSM5-206ENST00000409987 RNF175Q8N4F7 328 aa3.34□□□□□ -1.87
LSM5-206ENST00000409987 ZNF433Q8N7K0 673 aaPredicted RBP3.34□□□□□ -1.87
LSM5-206ENST00000409987 ZDHHC22Q8N966 263 aa3.34□□□□□ -1.87
LSM5-206ENST00000409987 OR51D1Q8NGF3 324 aa3.34□□□□□ -1.87
LSM5-206ENST00000409987 OR51H1Q8NH63 302 aa3.34□□□□□ -1.87
LSM5-206ENST00000409987 OR2V1Q8NHB1 315 aa3.34□□□□□ -1.87
LSM5-206ENST00000409987 ZNRF2Q8NHG8 242 aa3.34□□□□□ -1.87
LSM5-206ENST00000409987 YIPF5Q969M3 257 aa3.34□□□□□ -1.87
LSM5-206ENST00000409987 RAD51AP1Q96B01 352 aa3.34□□□□□ -1.87
LSM5-206ENST00000409987 CHCHD7Q9BUK0 85 aa3.34□□□□□ -1.87
LSM5-206ENST00000409987 GNB1LQ9BYB4 327 aa3.34□□□□□ -1.87
LSM5-206ENST00000409987 EIF5A2Q9GZV4 153 aaKnown RBP3.34□□□□□ -1.87
LSM5-206ENST00000409987 LINC00527Q9UJ94 153 aa3.34□□□□□ -1.87
LSM5-206ENST00000409987 SCN4AP35499 1836 aa3.34□□□□□ -1.87
LSM5-206ENST00000409987 ZBED9Q6R2W3 1325 aa3.34□□□□□ -1.87
LSM5-206ENST00000409987 TDRD6O60522 2096 aaKnown RBP3.34□□□□□ -1.88
LSM5-206ENST00000409987 TRANK1O15050 2925 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 IGHV3-49A0A0A0MS15 119 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 A0A1W2PP18 115 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 C2orf74A8MZ97 194 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 F5H5P2 479 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 C15orf65H3BRN8 121 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 K7EQS6 105 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 IGKV1-39P01597 117 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 IGKV1D-39P04432 117 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 SEC11BP0C7V7 166 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 ZNF83P51522 516 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 FABP5Q01469 135 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 POU6F1Q14863 301 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 MPPED2Q15777 294 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 TMEM241Q24JQ0 296 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 ACOT6Q3I5F7 207 aaPredicted RBP3.33□□□□□ -1.88
LSM5-206ENST00000409987 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 CYHR1Q6ZMK1 362 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 NTM-AS1Q6ZSK4 140 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 SMIM15Q7Z3B0 74 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 CALHM3Q86XJ0 350 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 DOLPP1Q86YN1 238 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 DEFB123Q8N688 67 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 OR2M3Q8NG83 312 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 OR2D3Q8NGH3 330 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 BTF3L4Q96K17 158 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 SLC35G5Q96KT7 338 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 OR52B2Q96RD2 323 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 SIGMAR1Q99720 223 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 ZNF331Q9NQX6 463 aaPredicted RBP3.33□□□□□ -1.88
LSM5-206ENST00000409987 CACNA1GO43497 2377 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 SMG6Q86US8 1419 aaKnown RBP3.33□□□□□ -1.88
LSM5-206ENST00000409987 TAF1LQ8IZX4 1826 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 CFAP47Q6ZTR5 3102 aa3.33□□□□□ -1.88
LSM5-206ENST00000409987 IGKV1-6A0A0C4DH72 117 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 GOLGA6L4A6NEF3 574 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 DISC1C4P0D8 188 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 ZNF878C9JN71 531 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 C11orf94C9JXX5 98 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 KLRC4O43908 158 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 IGLV3-25P01717 112 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 OR56A5P0C7T3 313 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 CD79AP11912 226 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 GTF2F2P13984 249 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 MDKP21741 143 aaPredicted RBP3.32□□□□□ -1.88
LSM5-206ENST00000409987 OR1E2P47887 323 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 MARCKSL1P49006 195 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 INPP1P49441 399 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 CCR6P51684 374 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 TMEM33P57088 247 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 SNAP25P60880 206 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 HLA-DRB3P79483 266 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 SYCNQ0VAF6 134 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 TMEM267Q0VDI3 215 aaPredicted RBP3.32□□□□□ -1.88
LSM5-206ENST00000409987 JOSD1Q15040 202 aaPredicted RBP3.32□□□□□ -1.88
LSM5-206ENST00000409987 LIN52Q52LA3 116 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 FAM78BQ5VT40 261 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 MORN3Q6PF18 240 aaPredicted RBP3.32□□□□□ -1.88
LSM5-206ENST00000409987 SLC36A1Q7Z2H8 476 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 ZNF550Q7Z398 422 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 MARCH3Q86UD3 253 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 TAC4Q86UU9 113 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 ZBTB8OSQ8IWT0 167 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 MKXQ8IYA7 352 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 OR9I1Q8NGQ6 314 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 OR5W2Q8NH69 310 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 DCUN1D1Q96GG9 259 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 ACY3Q96HD9 319 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms