RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 TSPO2Q5TGU0 170 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 RAET1LQ5VY80 246 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 OTPQ5XKR4 325 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 UNQ5815/PRO19632Q6UWF5 114 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 FAM57BQ71RH2 274 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 PRSS41Q7RTY9 318 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 CPEB2Q7Z5Q1 589 aaKnown RBP9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 BATF2Q8N1L9 274 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 C17orf78Q8N4C9 275 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 OR4S2Q8NH73 311 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 PSMF1Q92530 271 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 LSM10Q969L4 123 aaKnown RBP9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 RELTQ969Z4 430 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 OR6C1Q96RD1 312 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 GNB1LQ9BYB4 327 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 PATZ1Q9HBE1 687 aaKnown RBP9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 HRASLS2Q9NWW9 162 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 NPIPA1Q9UND3 350 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 TBL2Q9Y4P3 447 aaKnown RBP9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 LY96Q9Y6Y9 160 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 FLNBO75369 2602 aaKnown RBP9.03□□□□□ -0.96
NIF3L1-204ENST00000409357 A0A1W2PNV4 684 aa9.03□□□□□ -0.96
NIF3L1-204ENST00000409357 CNOT4O95628 575 aaKnown RBP9.03□□□□□ -0.96
NIF3L1-204ENST00000409357 GNRHRP30968 328 aa9.03□□□□□ -0.96
NIF3L1-204ENST00000409357 OR1D4P47884 311 aa9.03□□□□□ -0.96
NIF3L1-204ENST00000409357 SNAI3Q3KNW1 292 aa9.03□□□□□ -0.96
NIF3L1-204ENST00000409357 PRR27Q6MZM9 219 aa9.03□□□□□ -0.96
NIF3L1-204ENST00000409357 H1FNTQ75WM6 255 aaPredicted RBP9.03□□□□□ -0.96
NIF3L1-204ENST00000409357 UEVLDQ8IX04 471 aa9.03□□□□□ -0.96
NIF3L1-204ENST00000409357 ZNF321PQ8N8H1 164 aa9.03□□□□□ -0.96
NIF3L1-204ENST00000409357 OR4F17Q8NGA8 305 aa9.03□□□□□ -0.96
NIF3L1-204ENST00000409357 OR4F4Q96R69 305 aa9.03□□□□□ -0.96
NIF3L1-204ENST00000409357 MRPL13Q9BYD1 178 aaKnown RBP9.03□□□□□ -0.96
NIF3L1-204ENST00000409357 SAMD10Q9BYL1 202 aa9.03□□□□□ -0.96
NIF3L1-204ENST00000409357 TAAR3PQ9P1P4 343 aa9.03□□□□□ -0.96
NIF3L1-204ENST00000409357 PCNX3Q9H6A9 2034 aa9.02□□□□□ -0.96
NIF3L1-204ENST00000409357 LRP5LA4QPB2 252 aa9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 FAM90A26D6RGX4 464 aa9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 HRKO00198 91 aa9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 CDIPTO14735 213 aa9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 DHRS3O75911 302 aa9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 CTSBP07858 339 aa9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 LDLRAD2Q5SZI1 272 aa9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 PRSS57Q6UWY2 283 aa9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 MEX3BQ6ZN04 569 aaKnown RBP9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 TBC1D26Q86UD7 250 aa9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 NIT1Q86X76 327 aa9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 ZNF295-AS1Q8N0V1 137 aa9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 RPP25LQ8N5L8 163 aaKnown RBP9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 OR11L1Q8NGX0 322 aa9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 TAF15Q92804 592 aaKnown RBP eCLIP9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 UHRF2Q96PU4 802 aa9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 RSG1Q9BU20 258 aa9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 VSIRQ9H7M9 311 aa9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 ZNF430Q9H8G1 570 aaPredicted RBP9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 AKIRIN1Q9H9L7 192 aaPredicted RBP9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 PNRC2Q9NPJ4 139 aaKnown RBP9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 PRTFDC1Q9NRG1 225 aa9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 SOHLH2Q9NX45 425 aa9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 C1RLQ9NZP8 487 aa9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 IL19Q9UHD0 177 aa9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 RBM7Q9Y580 266 aaKnown RBP9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 LHFPL6Q9Y693 200 aa9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 UBR5O95071 2799 aaPredicted RBP9.02□□□□□ -0.97
NIF3L1-204ENST00000409357 FAM90A10PA6NDY2 464 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 FAM90A18PA6NE21 464 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 FAM90A16PA6NEW6 464 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 DPRXA6NFQ7 191 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 FAM90A20PA6NIJ5 464 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 FAM90A8PA6NJQ4 464 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 FAM90A7PA6NKC0 464 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 FAM90A22PA8MWA6 464 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 FAM90A12PA8MX19 464 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 FAM90A5PA8MXJ8 464 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 FAM90A23PA8MXZ1 464 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 TGFBR3LH3BV60 316 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 CORTO00230 105 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 TRAF3IP2O43734 574 aaPredicted RBP9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 TRAPPC6AO75865 159 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 S1PR2O95136 353 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 FAM90A15PP0C7V4 464 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 FAM90A13PP0C7W8 464 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 FAM90A14PP0C7W9 464 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 FAM90A24PP0C7X0 464 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 PVRP15151 417 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 CD1BP29016 333 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 FGF8P55075 233 aaPredicted RBP9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 CLDN15P56746 228 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 FXYD4P59646 89 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 ATP1A1-AS1Q5TC04 95 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 WDR73Q6P4I2 378 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 C16orf54Q6UWD8 224 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 OOSP2Q86WS3 158 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 BAGE3Q86Y29 109 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 BAGE2Q86Y30 109 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 GATSQ8NAP1 163 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 OR4F5Q8NH21 305 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 SGMS2Q8NHU3 365 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 RAB1CQ92928 201 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 SFRP2Q96HF1 295 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms