RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 OR13A1Q8NGR1 328 aa8.21□□□□□ -1.1
MSH2-202ENST00000406134 PRR7Q8TB68 274 aa8.21□□□□□ -1.1
MSH2-202ENST00000406134 FRZBQ92765 325 aa8.21□□□□□ -1.1
MSH2-202ENST00000406134 C1orf159Q96HA4 380 aa8.21□□□□□ -1.1
MSH2-202ENST00000406134 MEGF10Q96KG7 1140 aa8.21□□□□□ -1.1
MSH2-202ENST00000406134 CDH20Q9HBT6 801 aa8.21□□□□□ -1.1
MSH2-202ENST00000406134 GALR2O43603 387 aaPredicted RBP8.21□□□□□ -1.1
MSH2-202ENST00000406134 ZG16O60844 167 aa8.21□□□□□ -1.1
MSH2-202ENST00000406134 NPPCP23582 126 aa8.21□□□□□ -1.1
MSH2-202ENST00000406134 RAB11AP62491 216 aa8.21□□□□□ -1.1
MSH2-202ENST00000406134 SLC38A11Q08AI6 406 aa8.21□□□□□ -1.1
MSH2-202ENST00000406134 FOXF2Q12947 444 aa8.21□□□□□ -1.1
MSH2-202ENST00000406134 KIAA0141Q14154 515 aaPredicted RBP8.21□□□□□ -1.1
MSH2-202ENST00000406134 Q6ZT83 130 aa8.21□□□□□ -1.1
MSH2-202ENST00000406134 DEFB123Q8N688 67 aa8.21□□□□□ -1.1
MSH2-202ENST00000406134 TPRX1Q8N7U7 411 aa8.21□□□□□ -1.1
MSH2-202ENST00000406134 DCTN5Q9BTE1 182 aa8.21□□□□□ -1.1
MSH2-202ENST00000406134 MRPL37Q9BZE1 423 aaKnown RBP8.21□□□□□ -1.1
MSH2-202ENST00000406134 TIMM9Q9Y5J7 89 aa8.21□□□□□ -1.1
MSH2-202ENST00000406134 ZZEF1O43149 2961 aa8.2□□□□□ -1.1
MSH2-202ENST00000406134 TMEM210A6NLX4 147 aa8.2□□□□□ -1.1
MSH2-202ENST00000406134 PRSS46E5RG02 174 aa8.2□□□□□ -1.1
MSH2-202ENST00000406134 SH2D1BO14796 132 aa8.2□□□□□ -1.1
MSH2-202ENST00000406134 CYB5R3P00387 301 aaPredicted RBP8.2□□□□□ -1.1
MSH2-202ENST00000406134 ZNF16P17020 682 aaPredicted RBP8.2□□□□□ -1.1
MSH2-202ENST00000406134 EGR1P18146 543 aa8.2□□□□□ -1.1
MSH2-202ENST00000406134 GZMHP20718 246 aa8.2□□□□□ -1.1
MSH2-202ENST00000406134 ELLP55199 621 aaPredicted RBP8.2□□□□□ -1.1
MSH2-202ENST00000406134 PAX5Q02548 391 aa8.2□□□□□ -1.1
MSH2-202ENST00000406134 TLE1Q04724 770 aa8.2□□□□□ -1.1
MSH2-202ENST00000406134 ZNF816Q0VGE8 651 aaPredicted RBP8.2□□□□□ -1.1
MSH2-202ENST00000406134 MCEMP1Q8IX19 187 aa8.2□□□□□ -1.1
MSH2-202ENST00000406134 C9orf106Q8NAJ2 232 aa8.2□□□□□ -1.1
MSH2-202ENST00000406134 NANOS1Q8WY41 292 aaKnown RBP8.2□□□□□ -1.1
MSH2-202ENST00000406134 P2RX4Q99571 388 aa8.2□□□□□ -1.1
MSH2-202ENST00000406134 UNKLQ9H9P5 680 aaKnown RBP8.2□□□□□ -1.1
MSH2-202ENST00000406134 MAP1LC3B2A6NCE7 125 aa8.2□□□□□ -1.1
MSH2-202ENST00000406134 CYB5BO43169 146 aa8.2□□□□□ -1.1
MSH2-202ENST00000406134 IGLV1-44P01699 117 aa8.2□□□□□ -1.1
MSH2-202ENST00000406134 GPX4P36969 197 aaPredicted RBP8.2□□□□□ -1.1
MSH2-202ENST00000406134 SNIP1Q8TAD8 396 aaKnown RBP8.2□□□□□ -1.1
MSH2-202ENST00000406134 TMEM170AQ8WVE7 144 aa8.2□□□□□ -1.1
MSH2-202ENST00000406134 MAP1LC3BQ9GZQ8 125 aa8.2□□□□□ -1.1
MSH2-202ENST00000406134 ZFHX3Q15911 3703 aa8.2□□□□□ -1.1
MSH2-202ENST00000406134 IFNA5P01569 189 aa8.2□□□□□ -1.1
MSH2-202ENST00000406134 IFNA17P01571 189 aa8.2□□□□□ -1.1
MSH2-202ENST00000406134 ANKRD39Q53RE8 183 aa8.2□□□□□ -1.1
MSH2-202ENST00000406134 ZNF808Q8N4W9 903 aaPredicted RBP8.2□□□□□ -1.1
MSH2-202ENST00000406134 ZNF610Q8N9Z0 462 aa8.2□□□□□ -1.1
MSH2-202ENST00000406134 PYGO2Q9BRQ0 406 aa8.2□□□□□ -1.1
MSH2-202ENST00000406134 PRDM13Q9H4Q3 707 aa8.2□□□□□ -1.1
MSH2-202ENST00000406134 DKK4Q9UBT3 224 aa8.2□□□□□ -1.1
MSH2-202ENST00000406134 FZR1Q9UM11 496 aa8.2□□□□□ -1.1
MSH2-202ENST00000406134 C15orf62A8K5M9 175 aa8.19□□□□□ -1.1
MSH2-202ENST00000406134 B4DEV8 164 aa8.19□□□□□ -1.1
MSH2-202ENST00000406134 TRGC1P0CF51 173 aa8.19□□□□□ -1.1
MSH2-202ENST00000406134 CD46P15529 392 aa8.19□□□□□ -1.1
MSH2-202ENST00000406134 KITLGP21583 273 aa8.19□□□□□ -1.1
MSH2-202ENST00000406134 HNF4GQ14541 408 aa8.19□□□□□ -1.1
MSH2-202ENST00000406134 SEM1Q6ZVN7 128 aa8.19□□□□□ -1.1
MSH2-202ENST00000406134 MRGPRDQ8TDS7 321 aa8.19□□□□□ -1.1
MSH2-202ENST00000406134 VAX2Q9UIW0 290 aa8.19□□□□□ -1.1
MSH2-202ENST00000406134 TRBV24-1A0A075B6N3 115 aa8.19□□□□□ -1.1
MSH2-202ENST00000406134 TMEM30CPA0ZSE6 113 aa8.19□□□□□ -1.1
MSH2-202ENST00000406134 HMGB3O15347 200 aaKnown RBP8.19□□□□□ -1.1
MSH2-202ENST00000406134 ZNF737O75373 536 aa8.19□□□□□ -1.1
MSH2-202ENST00000406134 KRASP01116 189 aa8.19□□□□□ -1.1
MSH2-202ENST00000406134 PFN1P07737 140 aaKnown RBP8.19□□□□□ -1.1
MSH2-202ENST00000406134 OR9G9P0C7N8 305 aa8.19□□□□□ -1.1
MSH2-202ENST00000406134 CECR9P0C854 216 aa8.19□□□□□ -1.1
MSH2-202ENST00000406134 NDUFB7P17568 137 aa8.19□□□□□ -1.1
MSH2-202ENST00000406134 RPS16P62249 146 aaKnown RBP8.19□□□□□ -1.1
MSH2-202ENST00000406134 TRIP6Q15654 476 aaKnown RBP8.19□□□□□ -1.1
MSH2-202ENST00000406134 OR8G2PQ6IF36 304 aa8.19□□□□□ -1.1
MSH2-202ENST00000406134 IGFL2Q6UWQ7 119 aa8.19□□□□□ -1.1
MSH2-202ENST00000406134 FAM214BQ7L5A3 538 aa8.19□□□□□ -1.1
MSH2-202ENST00000406134 MRGPRGQ86SM5 289 aa8.19□□□□□ -1.1
MSH2-202ENST00000406134 FER1L6-AS2Q96M78 137 aa8.19□□□□□ -1.1
MSH2-202ENST00000406134 HEATR1Q9H583 2144 aaKnown RBP8.19□□□□□ -1.1
MSH2-202ENST00000406134 OOEPA6NGQ2 149 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 TNFSF13O75888 250 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 CGAP01215 116 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 MSMO1Q15800 293 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 SPINK9Q5DT21 86 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 INO80CQ6PI98 192 aaPredicted RBP8.18□□□□□ -1.1
MSH2-202ENST00000406134 RHOVQ96L33 236 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 NPCDR1Q9BY65 106 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 PPP1R14DQ9NXH3 145 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 CACNA1DQ01668 2161 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 IGHV3-43A0A0B4J1X8 118 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 IGHV3-43DP0DP04 118 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 ZNF134P52741 427 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 COL10A1Q03692 680 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 ZNF674Q2M3X9 581 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 FDCSPQ8NFU4 85 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 OR13D1Q8NGV5 346 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 GALMQ96C23 342 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 DIRC2Q96SL1 478 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 RELNP78509 3460 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 IGKV1D-17A0A075B6S4 117 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms