RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 BATFQ16520 125 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 FAM78BQ5VT40 261 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 HIST2H3AQ71DI3 136 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 ZNF567Q8N184 647 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 RPRMLQ8N4K4 120 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 C3orf22Q8N5N4 141 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 OR5B17Q8NGF7 314 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 OR10D4PQ8NGN7 298 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 JOSD2Q8TAC2 188 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 DIRAS2Q96HU8 199 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 OR8B2Q96RD0 313 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 TMEM109Q9BVC6 243 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 PECRQ9BY49 303 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 OR51I2Q9H344 312 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 FKBP14Q9NWM8 211 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 WASHC3Q9Y3C0 194 aa1.84□□□□□ -2.11
HMGB1P17-201ENST00000403495 PLCH2O75038 1416 aa1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 ZFYVE9O95405 1425 aa1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 ZSWIM8A7E2V4 1837 aa1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 A0A1W2PNM2 257 aa1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 LINC00862A6NCI5 91 aa1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 CLDN24A6NM45 220 aa1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 C3orf84H3BNL1 204 aa1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 KPNA3O00505 521 aaPredicted RBP1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 SLC25A20O43772 301 aa1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 DEDDO75618 318 aa1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 LGALS3P17931 250 aaKnown RBP1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 MAP2K4P45985 399 aa1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 CDK9P50750 372 aaKnown RBP1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 OR4D2P58180 307 aa1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 LINC00313P59037 77 aa1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 ERVS71-1P61550 626 aa1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 SPA17Q15506 151 aa1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 HCP5Q6MZN7 132 aa1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 SFXN4Q6P4A7 337 aa1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 NIT1Q86X76 327 aa1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 CLDN22Q8N7P3 220 aa1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 CMTM2Q8TAZ6 248 aa1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 DGCR14Q96DF8 476 aaKnown RBP1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 PRAP1Q96NZ9 151 aa1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 VPS29Q9UBQ0 182 aa1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 MCTS1Q9ULC4 181 aaKnown RBP1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 MRPS16Q9Y3D3 137 aaKnown RBP1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 FIS1Q9Y3D6 152 aa1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 ZNF337Q9Y3M9 751 aa1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 KIF15Q9NS87 1388 aa1.83□□□□□ -2.12
HMGB1P17-201ENST00000403495 IGSF23A1L1A6 192 aa1.82□□□□□ -2.12
HMGB1P17-201ENST00000403495 DISC1C4P0D8 188 aa1.82□□□□□ -2.12
HMGB1P17-201ENST00000403495 M0R381 172 aa1.82□□□□□ -2.12
HMGB1P17-201ENST00000403495 DENRO43583 198 aaKnown RBP1.82□□□□□ -2.12
HMGB1P17-201ENST00000403495 SULT1B1O43704 296 aa1.82□□□□□ -2.12
HMGB1P17-201ENST00000403495 NSA2O95478 260 aaKnown RBP1.82□□□□□ -2.12
HMGB1P17-201ENST00000403495 IGLV3-27P01718 113 aa1.82□□□□□ -2.12
HMGB1P17-201ENST00000403495 OPN1SWP03999 348 aa1.82□□□□□ -2.12
HMGB1P17-201ENST00000403495 CTSGP08311 255 aa1.82□□□□□ -2.12
HMGB1P17-201ENST00000403495 CRABP1P29762 137 aa1.82□□□□□ -2.12
HMGB1P17-201ENST00000403495 OR10J1P30954 320 aa1.82□□□□□ -2.12
HMGB1P17-201ENST00000403495 PPP1R2P41236 205 aa1.82□□□□□ -2.12
HMGB1P17-201ENST00000403495 CA7P43166 264 aa1.82□□□□□ -2.12
HMGB1P17-201ENST00000403495 DAPP51397 102 aa1.82□□□□□ -2.12
HMGB1P17-201ENST00000403495 TMEM33P57088 247 aa1.82□□□□□ -2.12
HMGB1P17-201ENST00000403495 MEF2BQ02080 365 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P17-201ENST00000403495 PRDX4Q13162 271 aa1.82□□□□□ -2.12
HMGB1P17-201ENST00000403495 OR8G1Q15617 311 aa1.82□□□□□ -2.12
HMGB1P17-201ENST00000403495 PPP1R2P3Q6NXS1 205 aa1.82□□□□□ -2.12
HMGB1P17-201ENST00000403495 ZNF550Q7Z398 422 aa1.82□□□□□ -2.12
HMGB1P17-201ENST00000403495 BAP18Q8IXM2 172 aa1.82□□□□□ -2.12
HMGB1P17-201ENST00000403495 OR5C1Q8NGR4 320 aa1.82□□□□□ -2.12
HMGB1P17-201ENST00000403495 RAD51AP1Q96B01 352 aa1.82□□□□□ -2.12
HMGB1P17-201ENST00000403495 FLT4P35916 1363 aa1.82□□□□□ -2.12
HMGB1P17-201ENST00000403495 NACADO15069 1562 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 SMIM9A6NGZ8 99 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 GSTZ1O43708 216 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 CHP2O43745 196 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 FADS1O60427 444 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 MT-CO2P00403 227 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 HLA-DQB2P05538 268 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 CRYGDP07320 174 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 CD79AP11912 226 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 ATP6V0CP27449 155 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 CAPZBP47756 277 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 MARCKSL1P49006 195 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 AKR1C2P52895 323 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 BTN3A2P78410 334 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 IFITM2Q01629 132 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 CST6Q15828 149 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 C1orf194Q5T5A4 169 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 SBSNQ6UWP8 590 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 CCDC121Q6ZUS5 278 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 LRRC25Q8N386 305 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 TMEM86BQ8N661 226 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 OR1L8Q8NGR8 309 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 ANP32BQ92688 251 aaKnown RBP1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 SLC35B4Q969S0 331 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 MS4A6EQ96DS6 147 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 TBX5Q99593 518 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 HIGD2AQ9BW72 106 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 MRPL16Q9NX20 251 aaKnown RBP1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 GLTPQ9NZD2 209 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 ARL2BPQ9Y2Y0 163 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms