RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 ZNF415Q09FC8 603 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 C9orf62Q8N4C0 152 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 FAM89BQ8N5H3 189 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 UCN2Q96RP3 112 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 HDHD3Q9BSH5 251 aaPredicted RBP9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 SFXN3Q9BWM7 321 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 WDR54Q9H977 334 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 IL19Q9UHD0 177 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 ZNF107Q9UII5 783 aaPredicted RBP9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 RPL27AP46776 148 aaKnown RBP9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 KIAA0040Q15053 153 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 DMKNQ6E0U4 476 aaPredicted RBP9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 C7orf66A4D0T2 115 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 BGLAPP02818 100 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 EEF1AKMT3Q96AZ1 226 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 SSBP3Q9BWW4 388 aaPredicted RBP9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 FLRT3Q9NZU0 649 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 TSPOP30536 169 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 RPL32P62910 135 aaKnown RBP9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 KLF9Q13886 244 aaPredicted RBP9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 ZNF362Q5T0B9 420 aaPredicted RBP9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 SPNS2Q8IVW8 549 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 FAM169BQ8N8A8 192 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 PEMTQ9UBM1 199 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 SFTA2Q6UW10 78 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 ERASQ7Z444 233 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 VN1R4Q7Z5H5 301 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 ZNF645Q8N7E2 425 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 DNASE2BQ8WZ79 361 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 PGLYRP3Q96LB9 341 aa9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 RCC2Q9P258 522 aaKnown RBP9.56□□□□□ -0.88
CACNA1C-215ENST00000399637 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 H3BQ15 152 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 S1PR2O95136 353 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 MC5RP33032 325 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 DLX6P56179 175 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 TMEM249Q2WGJ8 235 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 S100A7L2Q5SY68 101 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 TMEM183AQ8IXX5 376 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 FAM216AQ8WUB2 273 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 SLC25A28Q96A46 364 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 GP6Q9HCN6 339 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 ELOVL5Q9NYP7 299 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 NHSL1Q5SYE7 1610 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 ARID1BQ8NFD5 2236 aaPredicted RBP9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 IGHV1-45A0A0A0MS14 117 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 CRPP02741 224 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 HOXA6P31267 233 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 LILRA6Q6PI73 481 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 OVCH2Q7RTZ1 564 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 LYZL2Q7Z4W2 148 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 DUX3Q96PT4 197 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 IL36RNQ9UBH0 155 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 CROCCQ5TZA2 2017 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 TRGV2A0A075B6R0 118 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 J3QKU1 62 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 HLA-DQB1P01920 261 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 CX3CL1P78423 397 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 ZNF383Q8NA42 475 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 RAB33BQ9H082 229 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 PHLDA3Q9Y5J5 127 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 CDC42EP2O14613 210 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 CRHP06850 196 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 CKS2P33552 79 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 FOXL2P58012 376 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 JOSD1Q15040 202 aaPredicted RBP9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 PNKDQ8N490 385 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 TDGF1P13385 188 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 APOBEC3AP31941 199 aaPredicted RBP9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 P2RY6Q15077 328 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 PXMP4Q9Y6I8 212 aa9.55□□□□□ -0.88
CACNA1C-215ENST00000399637 B9A039 149 aa9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 RPS20P60866 119 aaKnown RBP9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 WNT2BQ93097 391 aa9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 ZG16BQ96DA0 208 aa9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 COL25A1Q9BXS0 654 aaPredicted RBP9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 TLNRD1Q9H1K6 362 aa9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 MAP1LC3AQ9H492 121 aa9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 EREGO14944 169 aa9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 IGHV3-23P01764 117 aa9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 MALP21145 153 aa9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 ANOS1P23352 680 aa9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 ZNF56Q15929 161 aa9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 GALNT14Q96FL9 552 aa9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 NPVFQ9HCQ7 196 aa9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 HSPB7Q9UBY9 170 aa9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 RBFOX2O43251 390 aaKnown RBP eCLIP9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 LIPFP07098 398 aa9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 ACSF3Q4G176 576 aaPredicted RBP9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 CHST5Q9GZS9 411 aa9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 NPC2P61916 151 aa9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 ISOC2Q96AB3 205 aa9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 LINC01587Q99440 93 aa9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 GSN-AS1Q9NRJ2 163 aa9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 PEX11BO96011 259 aa9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 UCP2P55851 309 aa9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 PKIAP61925 76 aa9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 SPRED2Q7Z698 418 aa9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 OR5AN1Q8NGI8 311 aa9.54□□□□□ -0.88
CACNA1C-215ENST00000399637 LSM10Q969L4 123 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms