RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 AKAP6Q13023 2319 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 A0A0A6YYD4 124 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 RBP4P02753 201 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 NPBWR1P48145 328 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 SRSF7Q16629 238 aaKnown RBP eCLIP6.92□□□□□ -1.3
PTPRD-204ENST00000397606 SDHCQ99643 169 aaPredicted RBP6.92□□□□□ -1.3
PTPRD-204ENST00000397606 TMEM147Q9BVK8 224 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 CHD7Q9P2D1 2997 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 UMAD1C9J7I0 102 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 COX7A2P2O60397 106 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 CXCL3P19876 107 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 USF1P22415 310 aaPredicted RBP6.92□□□□□ -1.3
PTPRD-204ENST00000397606 S100PP25815 95 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 PSMB3P49720 205 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 UBE2KP61086 200 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 PXDC1Q5TGL8 231 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 OR2T10Q8NGZ9 312 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 ANGPTL6Q8NI99 470 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 SOSTQ9BQB4 213 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 MARCH11A6NNE9 402 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 NDUFS8O00217 210 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 NPY1RP25929 384 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 SPCS3P61009 180 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 CLEC12BQ2HXU8 276 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 MYPOPQ86VE0 399 aaPredicted RBP6.92□□□□□ -1.3
PTPRD-204ENST00000397606 OR1L6Q8NGR2 347 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 FAM216AQ8WUB2 273 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 TMEM133Q9H2Q1 129 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 F8VVB4 439 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 F8VWA3 439 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 OR2A4O95047 310 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 FBP1P09467 338 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 TMEM155Q4W5P6 130 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 ST8SIA2Q92186 375 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 OR5B12Q96R08 314 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 OR2A7Q96R45 310 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 KLF2Q9Y5W3 355 aaPredicted RBP6.91□□□□□ -1.3
PTPRD-204ENST00000397606 K7EQM0 130 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 PSPNO60542 156 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 SLC25A16P16260 332 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 EGR1P18146 543 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 CFPP27918 469 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 RND3P61587 244 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 ADORA2A-AS1P86434 159 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 WDR25Q64LD2 544 aaPredicted RBP6.91□□□□□ -1.3
PTPRD-204ENST00000397606 OR52M1Q8NGK5 317 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 RSRP1Q9BUV0 290 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 PATZ1Q9HBE1 687 aaKnown RBP6.91□□□□□ -1.3
PTPRD-204ENST00000397606 ANKHD1Q8IWZ3 2542 aaKnown RBP6.91□□□□□ -1.3
PTPRD-204ENST00000397606 SLC25A17O43808 307 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 SLC25A6P12236 298 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 MIDNQ504T8 468 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 DMRTC2Q8IXT2 367 aaPredicted RBP6.91□□□□□ -1.3
PTPRD-204ENST00000397606 CD177Q8N6Q3 437 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 OSR1Q8TAX0 266 aaPredicted RBP6.91□□□□□ -1.3
PTPRD-204ENST00000397606 Q8TCH9 128 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 TNFRSF14Q92956 283 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 SLC25A32Q9H2D1 315 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 TMEM140Q9NV12 185 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 NUDT19A8MXV4 375 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 FAM90A26D6RGX4 464 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 WISP2O76076 250 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 F12P00748 615 aaPredicted RBP6.91□□□□□ -1.3
PTPRD-204ENST00000397606 NAT1P18440 290 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 SULT1A1P50225 295 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 PPT1P50897 306 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 FBXL19-AS1Q494R0 122 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 RPL39P5Q59GN2 51 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 Q6ZR03 302 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 DNM1P46Q6ZS02 220 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 OR5T1Q8NG75 326 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 OR11H7Q8NGC8 314 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 LSM10Q969L4 123 aaKnown RBP6.91□□□□□ -1.3
PTPRD-204ENST00000397606 EML5Q05BV3 1969 aa6.91□□□□□ -1.3
PTPRD-204ENST00000397606 OR7C2O60412 319 aa6.9□□□□□ -1.3
PTPRD-204ENST00000397606 TFF1P04155 84 aa6.9□□□□□ -1.3
PTPRD-204ENST00000397606 MMP9P14780 707 aa6.9□□□□□ -1.3
PTPRD-204ENST00000397606 QRFPP83859 136 aa6.9□□□□□ -1.3
PTPRD-204ENST00000397606 ZNF674Q2M3X9 581 aa6.9□□□□□ -1.3
PTPRD-204ENST00000397606 PDPNQ86YL7 162 aa6.9□□□□□ -1.3
PTPRD-204ENST00000397606 RCC2Q9P258 522 aaKnown RBP6.9□□□□□ -1.3
PTPRD-204ENST00000397606 PRELID1Q9Y255 219 aa6.9□□□□□ -1.3
PTPRD-204ENST00000397606 U3KQ87 197 aa6.9□□□□□ -1.3
PTPRD-204ENST00000397606 NUP210LQ5VU65 1888 aa6.9□□□□□ -1.3
PTPRD-204ENST00000397606 IGLV3-1P01715 115 aa6.9□□□□□ -1.3
PTPRD-204ENST00000397606 CD55P08174 381 aa6.9□□□□□ -1.3
PTPRD-204ENST00000397606 COL8A2P25067 703 aa6.9□□□□□ -1.3
PTPRD-204ENST00000397606 ECSCRQ19T08 205 aa6.9□□□□□ -1.3
PTPRD-204ENST00000397606 ZNF788Q6ZQV5 615 aa6.9□□□□□ -1.3
PTPRD-204ENST00000397606 SELENOHQ8IZQ5 122 aaKnown RBP6.9□□□□□ -1.3
PTPRD-204ENST00000397606 DPF1Q92782 380 aa6.9□□□□□ -1.3
PTPRD-204ENST00000397606 GALNT14Q96FL9 552 aa6.9□□□□□ -1.3
PTPRD-204ENST00000397606 GAR1Q9NY12 217 aaKnown RBP6.9□□□□□ -1.3
PTPRD-204ENST00000397606 FBXL17Q9UF56 701 aa6.9□□□□□ -1.3
PTPRD-204ENST00000397606 B4DSR2 109 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 GNG7O60262 68 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 S1PR2O95136 353 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 NAPSAO96009 420 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 S100A6P06703 90 aa6.9□□□□□ -1.31
PTPRD-204ENST00000397606 GRNP28799 593 aaKnown RBP6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms