RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 ANGPTL4Q9BY76 406 aa9.24□□□□□ -0.93
CCDC40-204ENST00000397545 CXorf65A6NEN9 183 aa9.24□□□□□ -0.93
CCDC40-204ENST00000397545 DNPH1O43598 174 aa9.24□□□□□ -0.93
CCDC40-204ENST00000397545 MFAP2P55001 183 aa9.24□□□□□ -0.93
CCDC40-204ENST00000397545 KIAA1644Q3SXP7 199 aa9.24□□□□□ -0.93
CCDC40-204ENST00000397545 FAM162BQ5T6X4 162 aa9.24□□□□□ -0.93
CCDC40-204ENST00000397545 HSPB9Q9BQS6 159 aa9.24□□□□□ -0.93
CCDC40-204ENST00000397545 OR51M1Q9H341 326 aa9.24□□□□□ -0.93
CCDC40-204ENST00000397545 RBKSQ9H477 322 aa9.24□□□□□ -0.93
CCDC40-204ENST00000397545 WDR54Q9H977 334 aa9.24□□□□□ -0.93
CCDC40-204ENST00000397545 LYRM2Q9NU23 88 aaPredicted RBP9.24□□□□□ -0.93
CCDC40-204ENST00000397545 ZNF785A8K8V0 405 aa9.23□□□□□ -0.93
CCDC40-204ENST00000397545 H0Y980 276 aa9.23□□□□□ -0.93
CCDC40-204ENST00000397545 MIC13Q5XKP0 118 aa9.23□□□□□ -0.93
CCDC40-204ENST00000397545 ASPHD2Q6ICH7 369 aa9.23□□□□□ -0.93
CCDC40-204ENST00000397545 HARBI1Q96MB7 349 aa9.23□□□□□ -0.93
CCDC40-204ENST00000397545 TTTY12Q9BZ98 90 aa9.23□□□□□ -0.93
CCDC40-204ENST00000397545 TMEM167BQ9NRX6 74 aa9.23□□□□□ -0.93
CCDC40-204ENST00000397545 ONECUT1Q9UBC0 465 aa9.23□□□□□ -0.93
CCDC40-204ENST00000397545 A0A1B0GTI1 187 aa9.23□□□□□ -0.93
CCDC40-204ENST00000397545 J3QR06 171 aa9.23□□□□□ -0.93
CCDC40-204ENST00000397545 J3QRE1 110 aa9.23□□□□□ -0.93
CCDC40-204ENST00000397545 Q56UQ5 140 aa9.23□□□□□ -0.93
CCDC40-204ENST00000397545 OR4X1Q8NH49 305 aa9.23□□□□□ -0.93
CCDC40-204ENST00000397545 SMDT1Q9H4I9 107 aa9.23□□□□□ -0.93
CCDC40-204ENST00000397545 IGSF23A1L1A6 192 aa9.23□□□□□ -0.93
CCDC40-204ENST00000397545 CA11O75493 328 aa9.23□□□□□ -0.93
CCDC40-204ENST00000397545 SP1P08047 785 aa9.23□□□□□ -0.93
CCDC40-204ENST00000397545 CCL8P80075 99 aa9.23□□□□□ -0.93
CCDC40-204ENST00000397545 COL10A1Q03692 680 aa9.23□□□□□ -0.93
CCDC40-204ENST00000397545 TEPPQ6URK8 271 aa9.23□□□□□ -0.93
CCDC40-204ENST00000397545 RTBDNQ9BSG5 229 aaPredicted RBP9.23□□□□□ -0.93
CCDC40-204ENST00000397545 RNF126Q9BV68 326 aa9.23□□□□□ -0.93
CCDC40-204ENST00000397545 WNT5BQ9H1J7 359 aa9.23□□□□□ -0.93
CCDC40-204ENST00000397545 LAMA1P25391 3075 aa9.23□□□□□ -0.93
CCDC40-204ENST00000397545 ATG2AQ2TAZ0 1938 aa9.23□□□□□ -0.93
CCDC40-204ENST00000397545 TMSB15BA0A087X1C1 80 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 ZG16O60844 167 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 PDPNQ86YL7 162 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 LEAP2Q969E1 77 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 WDR61Q9GZS3 305 aaKnown RBP9.22□□□□□ -0.93
CCDC40-204ENST00000397545 BET1LQ9NYM9 111 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 PXMP4Q9Y6I8 212 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 PTPRQQ9UMZ3 2332 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 IGHV3-48P01763 117 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 S100A4P26447 101 aaKnown RBP9.22□□□□□ -0.93
CCDC40-204ENST00000397545 PRDX2P32119 198 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 WDR73Q6P4I2 378 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 CALHM1Q8IU99 346 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 LILRB1Q8NHL6 650 aaPredicted RBP9.22□□□□□ -0.93
CCDC40-204ENST00000397545 AAMDCQ9H7C9 122 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 HEATR1Q9H583 2144 aaKnown RBP9.22□□□□□ -0.93
CCDC40-204ENST00000397545 RFPL3SP0C7P2 107 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 COL8A1P27658 744 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 CDCP2Q5VXM1 449 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 TMEM108Q6UXF1 575 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 SGK494Q96LW2 274 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 CLEC5AQ9NY25 188 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 ZNF319Q9P2F9 582 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 IGHV1-45A0A0A0MS14 117 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 A0A1W2PN81 502 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 PROB1E7EW31 1015 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 PDE6DO43924 150 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 MELTFP08582 738 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 KHDC1LQ5JSQ8 128 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 VKORC1L1Q8N0U8 176 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 OR4F17Q8NGA8 305 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 TIMP4Q99727 224 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 GGACTQ9BVM4 153 aa9.22□□□□□ -0.93
CCDC40-204ENST00000397545 IGHV3-72A0A0B4J1Y9 119 aa9.21□□□□□ -0.93
CCDC40-204ENST00000397545 GRIFINA4D1Z8 144 aa9.21□□□□□ -0.93
CCDC40-204ENST00000397545 IFI6P09912 130 aa9.21□□□□□ -0.93
CCDC40-204ENST00000397545 OR10J1P30954 320 aa9.21□□□□□ -0.93
CCDC40-204ENST00000397545 CDX1P47902 265 aaPredicted RBP9.21□□□□□ -0.93
CCDC40-204ENST00000397545 ELOBQ15370 118 aa9.21□□□□□ -0.93
CCDC40-204ENST00000397545 GLRX5Q86SX6 157 aa9.21□□□□□ -0.93
CCDC40-204ENST00000397545 RNF2Q99496 336 aa9.21□□□□□ -0.93
CCDC40-204ENST00000397545 GAL3ST2Q9H3Q3 398 aa9.21□□□□□ -0.93
CCDC40-204ENST00000397545 ZNF552Q9H707 407 aaPredicted RBP9.21□□□□□ -0.93
CCDC40-204ENST00000397545 MYOZ1Q9NP98 299 aaPredicted RBP9.21□□□□□ -0.93
CCDC40-204ENST00000397545 LINC00587B1AMM8 73 aa9.21□□□□□ -0.94
CCDC40-204ENST00000397545 DIRC3C9JPN6 131 aa9.21□□□□□ -0.94
CCDC40-204ENST00000397545 CXorf1O96002 111 aa9.21□□□□□ -0.94
CCDC40-204ENST00000397545 DDTP30046 118 aa9.21□□□□□ -0.94
CCDC40-204ENST00000397545 GTF2H5Q6ZYL4 71 aa9.21□□□□□ -0.94
CCDC40-204ENST00000397545 BIVMQ86UB2 503 aa9.21□□□□□ -0.94
CCDC40-204ENST00000397545 OR8I2Q8N0Y5 310 aa9.21□□□□□ -0.94
CCDC40-204ENST00000397545 IL36RNQ9UBH0 155 aa9.21□□□□□ -0.94
CCDC40-204ENST00000397545 SPG11Q96JI7 2443 aa9.21□□□□□ -0.94
CCDC40-204ENST00000397545 A0A1W2PR77 199 aa9.21□□□□□ -0.94
CCDC40-204ENST00000397545 FAM87AP0C7U9 286 aa9.21□□□□□ -0.94
CCDC40-204ENST00000397545 UCP2P55851 309 aa9.21□□□□□ -0.94
CCDC40-204ENST00000397545 ABHD12Q8N2K0 398 aa9.21□□□□□ -0.94
CCDC40-204ENST00000397545 SEBOXQ9HB31 216 aaPredicted RBP9.21□□□□□ -0.94
CCDC40-204ENST00000397545 MST1P26927 711 aa9.2□□□□□ -0.94
CCDC40-204ENST00000397545 OR1P1Q8NH06 330 aa9.2□□□□□ -0.94
CCDC40-204ENST00000397545 ADTRPQ96IZ2 230 aa9.2□□□□□ -0.94
CCDC40-204ENST00000397545 NPVFQ9HCQ7 196 aa9.2□□□□□ -0.94
CCDC40-204ENST00000397545 ACACBO00763 2458 aa9.2□□□□□ -0.94
CCDC40-204ENST00000397545 LRRC3CA6NJW4 275 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms