RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 DRAM1Q8N682 238 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 ZNF645Q8N7E2 425 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 FAM216AQ8WUB2 273 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 H1FXQ92522 213 aaKnown RBP12.26□□□□□ -0.45
CAPN3-207ENST00000397200 SAT2Q96F10 170 aaPredicted RBP12.26□□□□□ -0.45
CAPN3-207ENST00000397200 LINC00052Q96N35 136 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 SSBP3Q9BWW4 388 aaPredicted RBP12.26□□□□□ -0.45
CAPN3-207ENST00000397200 ZC4H2Q9NQZ6 224 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 A0A1B0GU03 582 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 RAB19A4D1S5 217 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 NUDT19A8MXV4 375 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 C15orf65H3BRN8 121 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 GPR37O15354 613 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 FCN3O75636 299 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 GLIPR1P48060 266 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 HTD2P86397 168 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 GNMTQ14749 295 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 ZNF585BQ52M93 769 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 TPRX1Q8N7U7 411 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 OR1S2Q8NGQ3 325 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 OR13A1Q8NGR1 328 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 OR51H1Q8NH63 302 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 UBALD1Q8TB05 177 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 BSCL2Q96G97 398 aaPredicted RBP12.26□□□□□ -0.45
CAPN3-207ENST00000397200 SMIM8Q96KF7 97 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 NCOR1P1Q9H4R4 102 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 OR2S2Q9NQN1 319 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 FAM212BQ9NTI7 297 aaPredicted RBP12.26□□□□□ -0.45
CAPN3-207ENST00000397200 LPAR3Q9UBY5 353 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 NUP50Q9UKX7 468 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 PRRC2AP48634 2157 aaKnown RBP12.25□□□□□ -0.45
CAPN3-207ENST00000397200 FLNBO75369 2602 aaKnown RBP12.25□□□□□ -0.45
CAPN3-207ENST00000397200 A0A0G2JRQ6 117 aa12.25□□□□□ -0.45
CAPN3-207ENST00000397200 RNF212BA8MTL3 300 aa12.25□□□□□ -0.45
CAPN3-207ENST00000397200 KIAA1324LA8MWY0 1029 aaPredicted RBP12.25□□□□□ -0.45
CAPN3-207ENST00000397200 OR8U9P0C7N5 309 aa12.25□□□□□ -0.45
CAPN3-207ENST00000397200 IL2RGP31785 369 aa12.25□□□□□ -0.45
CAPN3-207ENST00000397200 SULT1A2P50226 295 aa12.25□□□□□ -0.45
CAPN3-207ENST00000397200 POLR2GP62487 172 aaKnown RBP eCLIP12.25□□□□□ -0.45
CAPN3-207ENST00000397200 UQCC3Q6UW78 93 aa12.25□□□□□ -0.45
CAPN3-207ENST00000397200 OR2C3Q8N628 320 aa12.25□□□□□ -0.45
CAPN3-207ENST00000397200 WFDC11Q8NEX6 87 aa12.25□□□□□ -0.45
CAPN3-207ENST00000397200 OR8U1Q8NH10 309 aa12.25□□□□□ -0.45
CAPN3-207ENST00000397200 C5orf30Q96GV9 206 aa12.25□□□□□ -0.45
CAPN3-207ENST00000397200 GINS3Q9BRX5 216 aa12.25□□□□□ -0.45
CAPN3-207ENST00000397200 LYRM2Q9NU23 88 aaPredicted RBP12.25□□□□□ -0.45
CAPN3-207ENST00000397200 CSMD1Q96PZ7 3565 aa12.25□□□□□ -0.45
CAPN3-207ENST00000397200 VPS13CQ709C8 3753 aa12.24□□□□□ -0.45
CAPN3-207ENST00000397200 ODAMA1E959 279 aa12.24□□□□□ -0.45
CAPN3-207ENST00000397200 RNF223E7ERA6 249 aa12.24□□□□□ -0.45
CAPN3-207ENST00000397200 SERPINE2P07093 398 aa12.24□□□□□ -0.45
CAPN3-207ENST00000397200 PVALBP20472 110 aaPredicted RBP12.24□□□□□ -0.45
CAPN3-207ENST00000397200 RPL31P62899 125 aaKnown RBP12.24□□□□□ -0.45
CAPN3-207ENST00000397200 EWSR1Q01844 656 aaKnown RBP eCLIP12.24□□□□□ -0.45
CAPN3-207ENST00000397200 CXorf66Q5JRM2 361 aaPredicted RBP12.24□□□□□ -0.45
CAPN3-207ENST00000397200 STPG2Q8N412 459 aa12.24□□□□□ -0.45
CAPN3-207ENST00000397200 MRGPRDQ8TDS7 321 aa12.24□□□□□ -0.45
CAPN3-207ENST00000397200 GPR146Q96CH1 333 aa12.24□□□□□ -0.45
CAPN3-207ENST00000397200 WFDC1Q9HC57 220 aa12.24□□□□□ -0.45
CAPN3-207ENST00000397200 KCNS2Q9ULS6 477 aa12.24□□□□□ -0.45
CAPN3-207ENST00000397200 A0A096LNT2 108 aa12.23□□□□□ -0.45
CAPN3-207ENST00000397200 TRBV23-1A0A0A0MS06 115 aa12.23□□□□□ -0.45
CAPN3-207ENST00000397200 TEX46H3BTG2 121 aa12.23□□□□□ -0.45
CAPN3-207ENST00000397200 IGKV1-5P01602 117 aa12.23□□□□□ -0.45
CAPN3-207ENST00000397200 LOXL1Q08397 574 aaPredicted RBP12.23□□□□□ -0.45
CAPN3-207ENST00000397200 OR52L2PQ8NGH6 319 aa12.23□□□□□ -0.45
CAPN3-207ENST00000397200 MARC2Q969Z3 335 aa12.23□□□□□ -0.45
CAPN3-207ENST00000397200 DCTN5Q9BTE1 182 aa12.23□□□□□ -0.45
CAPN3-207ENST00000397200 PLA2G2EQ9NZK7 142 aa12.23□□□□□ -0.45
CAPN3-207ENST00000397200 CCDC168Q8NDH2 2452 aa12.23□□□□□ -0.45
CAPN3-207ENST00000397200 MALRD1Q5VYJ5 2156 aa12.23□□□□□ -0.45
CAPN3-207ENST00000397200 LOC105371242A0A075B767 164 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 BORCS7-ASMTA0A0B4J1R7 106 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 hADV38S2A0JD32 116 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 IGSF23A1L1A6 192 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 FOXH1O75593 365 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 SEC11BP0C7V7 166 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 P0C879 139 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 SSTR5P35346 364 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 MEF2CQ06413 473 aaPredicted RBP12.22□□□□□ -0.45
CAPN3-207ENST00000397200 BAXQ07812 192 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 ODF3L1Q8IXM7 274 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 TCTEX1D1Q8N7M0 179 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 ARL11Q969Q4 196 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 SMIM3Q9BZL3 60 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 OR2D2Q9H210 308 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 MMP26Q9NRE1 261 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 C19orf12Q9NSK7 152 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 TAS2R3Q9NYW6 316 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 OR6C3Q9NZP0 311 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 RBM7Q9Y580 266 aaKnown RBP12.22□□□□□ -0.45
CAPN3-207ENST00000397200 TRGV10A0A0A0MS01 117 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 FAM157AC9JC47 383 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 SPINT2O43291 252 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 SSSCA1O60232 199 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 TMEM50AO95807 157 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 CRYZL1O95825 349 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 SPP1P10451 314 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 PAX9P55771 341 aa12.22□□□□□ -0.45
CAPN3-207ENST00000397200 LCN2P80188 198 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms