RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 OR6C3Q9NZP0 311 aa11.66□□□□□ -0.54
NUP98-204ENST00000397004 LRRC30A6NM36 301 aa11.66□□□□□ -0.54
NUP98-204ENST00000397004 TMEM250H0YL14 139 aa11.66□□□□□ -0.54
NUP98-204ENST00000397004 MLNRO43193 412 aa11.66□□□□□ -0.54
NUP98-204ENST00000397004 IFNA10P01566 189 aa11.66□□□□□ -0.54
NUP98-204ENST00000397004 C1QTNF9P0C862 333 aa11.66□□□□□ -0.54
NUP98-204ENST00000397004 FFAR4Q5NUL3 377 aa11.66□□□□□ -0.54
NUP98-204ENST00000397004 NEU1Q99519 415 aa11.66□□□□□ -0.54
NUP98-204ENST00000397004 A0A1W2PNU3 283 aaPredicted RBP11.65□□□□□ -0.54
NUP98-204ENST00000397004 ANKRD30BLA7E2S9 258 aa11.65□□□□□ -0.54
NUP98-204ENST00000397004 PROP1O75360 226 aa11.65□□□□□ -0.54
NUP98-204ENST00000397004 IL3RAP26951 378 aa11.65□□□□□ -0.54
NUP98-204ENST00000397004 TRIP6Q15654 476 aaKnown RBP11.65□□□□□ -0.54
NUP98-204ENST00000397004 MDP1Q86V88 176 aa11.65□□□□□ -0.54
NUP98-204ENST00000397004 NDUFAF3Q9BU61 184 aa11.65□□□□□ -0.54
NUP98-204ENST00000397004 PKIBQ9C010 78 aa11.65□□□□□ -0.54
NUP98-204ENST00000397004 RBM7Q9Y580 266 aaKnown RBP11.65□□□□□ -0.54
NUP98-204ENST00000397004 TIMM9Q9Y5J7 89 aa11.65□□□□□ -0.54
NUP98-204ENST00000397004 OR5B21A6NL26 309 aa11.65□□□□□ -0.54
NUP98-204ENST00000397004 PPP5D1E7EU14 171 aa11.65□□□□□ -0.54
NUP98-204ENST00000397004 WISP2O76076 250 aa11.65□□□□□ -0.54
NUP98-204ENST00000397004 FRMD6-AS1P0C7T7 363 aa11.65□□□□□ -0.54
NUP98-204ENST00000397004 FGF7P21781 194 aa11.65□□□□□ -0.54
NUP98-204ENST00000397004 LINC00310P59036 64 aa11.65□□□□□ -0.54
NUP98-204ENST00000397004 ZNF766Q5HY98 468 aa11.65□□□□□ -0.54
NUP98-204ENST00000397004 LINC01551Q86U37 167 aa11.65□□□□□ -0.54
NUP98-204ENST00000397004 OR2D2Q9H210 308 aa11.65□□□□□ -0.54
NUP98-204ENST00000397004 LIN7CQ9NUP9 197 aaKnown RBP11.65□□□□□ -0.54
NUP98-204ENST00000397004 MPC1Q9Y5U8 109 aa11.65□□□□□ -0.54
NUP98-204ENST00000397004 TET2Q6N021 2002 aaPredicted RBP11.65□□□□□ -0.55
NUP98-204ENST00000397004 TRAV38-1A0A0B4J264 116 aa11.65□□□□□ -0.55
NUP98-204ENST00000397004 CTXND1A0A1B0GTU2 59 aa11.65□□□□□ -0.55
NUP98-204ENST00000397004 C12orf77C9JDV5 145 aa11.65□□□□□ -0.55
NUP98-204ENST00000397004 J3QT63 122 aa11.65□□□□□ -0.55
NUP98-204ENST00000397004 TGOLN2O43493 480 aa11.65□□□□□ -0.55
NUP98-204ENST00000397004 ZNF826PQ6ZT77 177 aa11.65□□□□□ -0.55
NUP98-204ENST00000397004 TCF23Q7RTU1 214 aa11.65□□□□□ -0.55
NUP98-204ENST00000397004 TPRX1Q8N7U7 411 aa11.65□□□□□ -0.55
NUP98-204ENST00000397004 THOC3Q96J01 351 aaKnown RBP11.65□□□□□ -0.55
NUP98-204ENST00000397004 TP53TG3Q9ULZ0 132 aa11.65□□□□□ -0.55
NUP98-204ENST00000397004 MPLP40238 635 aa11.64□□□□□ -0.55
NUP98-204ENST00000397004 TDRG1Q3Y452 100 aa11.64□□□□□ -0.55
NUP98-204ENST00000397004 TMEM204Q9BSN7 226 aa11.64□□□□□ -0.55
NUP98-204ENST00000397004 SNHG12Q9BXW3 62 aa11.64□□□□□ -0.55
NUP98-204ENST00000397004 OR2J1Q9GZK6 312 aa11.64□□□□□ -0.55
NUP98-204ENST00000397004 METRNQ9UJH8 293 aa11.64□□□□□ -0.55
NUP98-204ENST00000397004 TYMSP04818 313 aa11.64□□□□□ -0.55
NUP98-204ENST00000397004 VWC2Q2TAL6 325 aa11.64□□□□□ -0.55
NUP98-204ENST00000397004 TMEM144Q7Z5S9 345 aa11.64□□□□□ -0.55
NUP98-204ENST00000397004 CXorf67Q86X51 503 aaPredicted RBP11.64□□□□□ -0.55
NUP98-204ENST00000397004 APH1AQ96BI3 265 aa11.64□□□□□ -0.55
NUP98-204ENST00000397004 DDA1Q9BW61 102 aa11.64□□□□□ -0.55
NUP98-204ENST00000397004 TTTY12Q9BZ98 90 aa11.64□□□□□ -0.55
NUP98-204ENST00000397004 SERPINA7P05543 415 aa11.64□□□□□ -0.55
NUP98-204ENST00000397004 GCH1P30793 250 aa11.64□□□□□ -0.55
NUP98-204ENST00000397004 OR3A1P47881 315 aa11.64□□□□□ -0.55
NUP98-204ENST00000397004 ZNF146Q15072 292 aa11.64□□□□□ -0.55
NUP98-204ENST00000397004 TMEM251Q8N6I4 163 aa11.64□□□□□ -0.55
NUP98-204ENST00000397004 C1orf159Q96HA4 380 aa11.64□□□□□ -0.55
NUP98-204ENST00000397004 GPR179Q6PRD1 2367 aa11.63□□□□□ -0.55
NUP98-204ENST00000397004 S100GP29377 79 aa11.63□□□□□ -0.55
NUP98-204ENST00000397004 PSMB3P49720 205 aa11.63□□□□□ -0.55
NUP98-204ENST00000397004 AESQ08117 197 aa11.63□□□□□ -0.55
NUP98-204ENST00000397004 UTF1Q5T230 341 aa11.63□□□□□ -0.55
NUP98-204ENST00000397004 C11orf53Q8IXP5 236 aa11.63□□□□□ -0.55
NUP98-204ENST00000397004 OR2T10Q8NGZ9 312 aa11.63□□□□□ -0.55
NUP98-204ENST00000397004 C15orf62A8K5M9 175 aa11.63□□□□□ -0.55
NUP98-204ENST00000397004 UBE2G2P60604 165 aa11.63□□□□□ -0.55
NUP98-204ENST00000397004 GBGT1Q8N5D6 347 aa11.63□□□□□ -0.55
NUP98-204ENST00000397004 COQ2Q96H96 371 aa11.63□□□□□ -0.55
NUP98-204ENST00000397004 LOXL2Q9Y4K0 774 aa11.63□□□□□ -0.55
NUP98-204ENST00000397004 Q3ZCU0 254 aa11.63□□□□□ -0.55
NUP98-204ENST00000397004 TCEAL6Q6IPX3 200 aa11.63□□□□□ -0.55
NUP98-204ENST00000397004 ZNF645Q8N7E2 425 aa11.63□□□□□ -0.55
NUP98-204ENST00000397004 WASF3Q9UPY6 502 aa11.63□□□□□ -0.55
NUP98-204ENST00000397004 TP53TG5Q9Y2B4 290 aa11.63□□□□□ -0.55
NUP98-204ENST00000397004 RRHO14718 337 aa11.62□□□□□ -0.55
NUP98-204ENST00000397004 CD82P27701 267 aa11.62□□□□□ -0.55
NUP98-204ENST00000397004 ZNF124Q15973 351 aa11.62□□□□□ -0.55
NUP98-204ENST00000397004 FAM78BQ5VT40 261 aa11.62□□□□□ -0.55
NUP98-204ENST00000397004 Q8TCH9 128 aa11.62□□□□□ -0.55
NUP98-204ENST00000397004 BCL2L2Q92843 193 aaPredicted RBP11.62□□□□□ -0.55
NUP98-204ENST00000397004 DCTN5Q9BTE1 182 aa11.62□□□□□ -0.55
NUP98-204ENST00000397004 POLR3KQ9Y2Y1 108 aaPredicted RBP11.62□□□□□ -0.55
NUP98-204ENST00000397004 C11orf94C9JXX5 98 aa11.62□□□□□ -0.55
NUP98-204ENST00000397004 FAM90A26D6RGX4 464 aa11.62□□□□□ -0.55
NUP98-204ENST00000397004 IFNA1P01562 189 aa11.62□□□□□ -0.55
NUP98-204ENST00000397004 PAX5Q02548 391 aa11.62□□□□□ -0.55
NUP98-204ENST00000397004 LRP11Q86VZ4 500 aa11.62□□□□□ -0.55
NUP98-204ENST00000397004 DTD1Q8TEA8 209 aa11.62□□□□□ -0.55
NUP98-204ENST00000397004 TMEM147Q9BVK8 224 aa11.62□□□□□ -0.55
NUP98-204ENST00000397004 ZDBF2Q9HCK1 2354 aa11.62□□□□□ -0.55
NUP98-204ENST00000397004 HCFC1P51610 2035 aa11.62□□□□□ -0.55
NUP98-204ENST00000397004 SSTR5P35346 364 aa11.62□□□□□ -0.55
NUP98-204ENST00000397004 ARR3P36575 388 aa11.62□□□□□ -0.55
NUP98-204ENST00000397004 SPRY4Q9C004 299 aa11.62□□□□□ -0.55
NUP98-204ENST00000397004 IGHV3-43A0A0B4J1X8 118 aa11.61□□□□□ -0.55
NUP98-204ENST00000397004 NDUFB4O95168 129 aa11.61□□□□□ -0.55
NUP98-204ENST00000397004 IGHV3-43DP0DP04 118 aa11.61□□□□□ -0.55
NUP98-204ENST00000397004 IDH3GP51553 393 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms