RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 TRAV6A0A075B6T7 132 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 MMP23AO75900 390 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 DHFRP00374 187 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 PPYP01298 95 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 RLN1P04808 185 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 H2AFB2P0C5Z0 115 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 IGHV1-8P0DP01 117 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 PGAM2P15259 253 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 SPNP16150 400 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 AADACP22760 399 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 FXYD4P59646 89 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 LTC4SQ16873 150 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 AADACL3Q5VUY0 350 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 ZNF660Q6AZW8 331 aaPredicted RBP8.26□□□□□ -1.09
NEDD8-202ENST00000396828 HEPN1Q6WQI6 88 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 LIAT1Q6ZQX7 453 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 C5orf24Q7Z6I8 188 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 LHFPL1Q86WI0 220 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 OR11H6Q8NGC7 330 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 OR52L2PQ8NGH6 319 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 OR52M1Q8NGK5 317 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 OR13C8Q8NGS7 320 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 ZFAND1Q8TCF1 268 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 MRAPQ8TCY5 172 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 EDARADDQ8WWZ3 215 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 MOB3AQ96BX8 217 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 R3HDM4Q96D70 268 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 MALSU1Q96EH3 234 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 RDH8Q9NYR8 311 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 OR1A1Q9P1Q5 309 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 C14orf166Q9Y224 244 aaKnown RBP8.26□□□□□ -1.09
NEDD8-202ENST00000396828 OR2W1Q9Y3N9 320 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 RBM7Q9Y580 266 aaKnown RBP8.26□□□□□ -1.09
NEDD8-202ENST00000396828 HILPDAQ9Y5L2 63 aa8.26□□□□□ -1.09
NEDD8-202ENST00000396828 OR5H14A6NHG9 310 aa8.25□□□□□ -1.09
NEDD8-202ENST00000396828 INMT-MINDY4F8WBC2 141 aa8.25□□□□□ -1.09
NEDD8-202ENST00000396828 ARPC1BO15143 372 aaKnown RBP8.25□□□□□ -1.09
NEDD8-202ENST00000396828 YPEL1O60688 119 aa8.25□□□□□ -1.09
NEDD8-202ENST00000396828 PEX14O75381 377 aa8.25□□□□□ -1.09
NEDD8-202ENST00000396828 TUSC2O75896 110 aa8.25□□□□□ -1.09
NEDD8-202ENST00000396828 RBP4P02753 201 aa8.25□□□□□ -1.09
NEDD8-202ENST00000396828 CD24P25063 80 aa8.25□□□□□ -1.09
NEDD8-202ENST00000396828 NFYBP25208 207 aa8.25□□□□□ -1.09
NEDD8-202ENST00000396828 S100GP29377 79 aa8.25□□□□□ -1.09
NEDD8-202ENST00000396828 LUMP51884 338 aaPredicted RBP8.25□□□□□ -1.09
NEDD8-202ENST00000396828 UCP3P55916 312 aa8.25□□□□□ -1.09
NEDD8-202ENST00000396828 ABCA11PQ4W5N1 156 aa8.25□□□□□ -1.09
NEDD8-202ENST00000396828 TCTEX1D4Q5JR98 221 aa8.25□□□□□ -1.09
NEDD8-202ENST00000396828 PRAMEF5Q5TYX0 476 aa8.25□□□□□ -1.09
NEDD8-202ENST00000396828 SLC38A6Q8IZM9 456 aa8.25□□□□□ -1.09
NEDD8-202ENST00000396828 OR2AK2Q8NG84 335 aa8.25□□□□□ -1.09
NEDD8-202ENST00000396828 OR13D1Q8NGV5 346 aa8.25□□□□□ -1.09
NEDD8-202ENST00000396828 MARCH1Q8TCQ1 289 aa8.25□□□□□ -1.09
NEDD8-202ENST00000396828 TOMM40LQ969M1 308 aa8.25□□□□□ -1.09
NEDD8-202ENST00000396828 YPEL2Q96QA6 119 aa8.25□□□□□ -1.09
NEDD8-202ENST00000396828 MARVELD1Q9BSK0 173 aa8.25□□□□□ -1.09
NEDD8-202ENST00000396828 TOLLIPQ9H0E2 274 aa8.25□□□□□ -1.09
NEDD8-202ENST00000396828 TBL2Q9Y4P3 447 aaKnown RBP8.25□□□□□ -1.09
NEDD8-202ENST00000396828 TENM3Q9P273 2699 aa8.25□□□□□ -1.09
NEDD8-202ENST00000396828 IGHV3-43A0A0B4J1X8 118 aa8.24□□□□□ -1.09
NEDD8-202ENST00000396828 A0A1W2PRX2 142 aa8.24□□□□□ -1.09
NEDD8-202ENST00000396828 SLC22A5O76082 557 aa8.24□□□□□ -1.09
NEDD8-202ENST00000396828 IGHV3-43DP0DP04 118 aa8.24□□□□□ -1.09
NEDD8-202ENST00000396828 IGLL1P15814 213 aa8.24□□□□□ -1.09
NEDD8-202ENST00000396828 PPP1CCP36873 323 aaKnown RBP8.24□□□□□ -1.09
NEDD8-202ENST00000396828 RAB7AP51149 207 aa8.24□□□□□ -1.09
NEDD8-202ENST00000396828 LOXL3P58215 753 aa8.24□□□□□ -1.09
NEDD8-202ENST00000396828 TAS2R31P59538 309 aa8.24□□□□□ -1.09
NEDD8-202ENST00000396828 GNMTQ14749 295 aa8.24□□□□□ -1.09
NEDD8-202ENST00000396828 Q3ZCU0 254 aa8.24□□□□□ -1.09
NEDD8-202ENST00000396828 MORN2Q502X0 79 aa8.24□□□□□ -1.09
NEDD8-202ENST00000396828 UTF1Q5T230 341 aa8.24□□□□□ -1.09
NEDD8-202ENST00000396828 C10orf99Q6UWK7 81 aa8.24□□□□□ -1.09
NEDD8-202ENST00000396828 Q6ZNX1 250 aa8.24□□□□□ -1.09
NEDD8-202ENST00000396828 TMED4Q7Z7H5 227 aa8.24□□□□□ -1.09
NEDD8-202ENST00000396828 NDUFA11Q86Y39 141 aa8.24□□□□□ -1.09
NEDD8-202ENST00000396828 CMTM1Q8IZ96 169 aa8.24□□□□□ -1.09
NEDD8-202ENST00000396828 OR10V1Q8NGI7 309 aa8.24□□□□□ -1.09
NEDD8-202ENST00000396828 SECTM1Q8WVN6 248 aa8.24□□□□□ -1.09
NEDD8-202ENST00000396828 ZNF486Q96H40 463 aaPredicted RBP8.24□□□□□ -1.09
NEDD8-202ENST00000396828 PRSS22Q9GZN4 317 aa8.24□□□□□ -1.09
NEDD8-202ENST00000396828 SLC5A7Q9GZV3 580 aa8.24□□□□□ -1.09
NEDD8-202ENST00000396828 FXYD6Q9H0Q3 95 aa8.24□□□□□ -1.09
NEDD8-202ENST00000396828 GFOD1Q9NXC2 390 aa8.24□□□□□ -1.09
NEDD8-202ENST00000396828 GPR132Q9UNW8 380 aa8.24□□□□□ -1.09
NEDD8-202ENST00000396828 VSIG4Q9Y279 399 aa8.24□□□□□ -1.09
NEDD8-202ENST00000396828 KIAA2026Q5HYC2 2103 aa8.23□□□□□ -1.09
NEDD8-202ENST00000396828 IGHV2-26A0A0B4J1V2 119 aa8.23□□□□□ -1.09
NEDD8-202ENST00000396828 SH2D7A6NKC9 451 aaPredicted RBP8.23□□□□□ -1.09
NEDD8-202ENST00000396828 ITGB1BP1O14713 200 aa8.23□□□□□ -1.09
NEDD8-202ENST00000396828 PRAF2O60831 178 aa8.23□□□□□ -1.09
NEDD8-202ENST00000396828 CTSDP07339 412 aaPredicted RBP8.23□□□□□ -1.09
NEDD8-202ENST00000396828 OR8U9P0C7N5 309 aa8.23□□□□□ -1.09
NEDD8-202ENST00000396828 MECP2P51608 486 aaKnown RBP8.23□□□□□ -1.09
NEDD8-202ENST00000396828 DYNLT3P51808 116 aa8.23□□□□□ -1.09
NEDD8-202ENST00000396828 RAB25P57735 213 aa8.23□□□□□ -1.09
NEDD8-202ENST00000396828 CD83Q01151 205 aa8.23□□□□□ -1.09
NEDD8-202ENST00000396828 LY6G6FQ5SQ64 297 aa8.23□□□□□ -1.09
NEDD8-202ENST00000396828 REC114Q7Z4M0 266 aa8.23□□□□□ -1.09
NEDD8-202ENST00000396828 CCDC71LQ8N9Z2 235 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms