RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 LY6EQ16553 131 aa17.12■□□□□ 0.33
FXN-202ENST00000396364 RTL8BQ17RB0 113 aa17.12■□□□□ 0.33
FXN-202ENST00000396364 C16orf87Q6PH81 154 aa17.12■□□□□ 0.33
FXN-202ENST00000396364 OR4D10Q8NGI6 311 aa17.12■□□□□ 0.33
FXN-202ENST00000396364 ZNF486Q96H40 463 aaPredicted RBP17.12■□□□□ 0.33
FXN-202ENST00000396364 DUX5Q96PT3 197 aa17.12■□□□□ 0.33
FXN-202ENST00000396364 SLC2A8Q9NY64 477 aa17.12■□□□□ 0.33
FXN-202ENST00000396364 GPR31O00270 319 aa17.11■□□□□ 0.33
FXN-202ENST00000396364 VENTXO95231 258 aa17.11■□□□□ 0.33
FXN-202ENST00000396364 MOSP00540 346 aa17.11■□□□□ 0.33
FXN-202ENST00000396364 ABCA11PQ4W5N1 156 aa17.11■□□□□ 0.33
FXN-202ENST00000396364 IDO2Q6ZQW0 420 aa17.11■□□□□ 0.33
FXN-202ENST00000396364 KCTD9Q7L273 389 aa17.11■□□□□ 0.33
FXN-202ENST00000396364 LHFPL1Q86WI0 220 aa17.11■□□□□ 0.33
FXN-202ENST00000396364 PDPNQ86YL7 162 aa17.11■□□□□ 0.33
FXN-202ENST00000396364 POC5Q8NA72 575 aa17.11■□□□□ 0.33
FXN-202ENST00000396364 BVESQ8NE79 360 aa17.11■□□□□ 0.33
FXN-202ENST00000396364 OR8H1Q8NGG4 311 aa17.11■□□□□ 0.33
FXN-202ENST00000396364 OR5AN1Q8NGI8 311 aa17.11■□□□□ 0.33
FXN-202ENST00000396364 OR51S1Q8NGJ8 323 aa17.11■□□□□ 0.33
FXN-202ENST00000396364 PIFOQ8TCI5 191 aa17.11■□□□□ 0.33
FXN-202ENST00000396364 SDHCQ99643 169 aaPredicted RBP17.11■□□□□ 0.33
FXN-202ENST00000396364 CHIAQ9BZP6 476 aa17.11■□□□□ 0.33
FXN-202ENST00000396364 FXYD6Q9H0Q3 95 aa17.11■□□□□ 0.33
FXN-202ENST00000396364 HRASLSQ9HDD0 168 aa17.11■□□□□ 0.33
FXN-202ENST00000396364 ESM1Q9NQ30 184 aa17.11■□□□□ 0.33
FXN-202ENST00000396364 C1RLQ9NZP8 487 aa17.11■□□□□ 0.33
FXN-202ENST00000396364 IGHV3-72A0A0B4J1Y9 119 aa17.1■□□□□ 0.33
FXN-202ENST00000396364 A6NDX4 124 aa17.1■□□□□ 0.33
FXN-202ENST00000396364 M0QZK8 103 aa17.1■□□□□ 0.33
FXN-202ENST00000396364 DUTP33316 252 aaKnown RBP17.1■□□□□ 0.33
FXN-202ENST00000396364 KIR2DS2P43631 304 aa17.1■□□□□ 0.33
FXN-202ENST00000396364 EBI3Q14213 229 aa17.1■□□□□ 0.33
FXN-202ENST00000396364 AADACL3Q5VUY0 350 aa17.1■□□□□ 0.33
FXN-202ENST00000396364 DHRS7BQ6IAN0 325 aaPredicted RBP17.1■□□□□ 0.33
FXN-202ENST00000396364 FAAP20Q6NZ36 180 aa17.1■□□□□ 0.33
FXN-202ENST00000396364 ZNF818PQ6ZRF7 136 aa17.1■□□□□ 0.33
FXN-202ENST00000396364 DRAXINQ8NBI3 349 aaPredicted RBP17.1■□□□□ 0.33
FXN-202ENST00000396364 RNF5Q99942 180 aa17.1■□□□□ 0.33
FXN-202ENST00000396364 SLC35D1Q9NTN3 355 aa17.1■□□□□ 0.33
FXN-202ENST00000396364 H0YJW9 148 aa17.09■□□□□ 0.33
FXN-202ENST00000396364 PROP1O75360 226 aa17.09■□□□□ 0.33
FXN-202ENST00000396364 OR2F2O95006 317 aa17.09■□□□□ 0.33
FXN-202ENST00000396364 ZNF735P0CB33 412 aa17.09■□□□□ 0.33
FXN-202ENST00000396364 CD24P25063 80 aa17.09■□□□□ 0.33
FXN-202ENST00000396364 GNRHRP30968 328 aa17.09■□□□□ 0.33
FXN-202ENST00000396364 CCDC71LQ8N9Z2 235 aa17.09■□□□□ 0.33
FXN-202ENST00000396364 TCTEX1D2Q8WW35 142 aa17.09■□□□□ 0.33
FXN-202ENST00000396364 EAF1Q96JC9 268 aaPredicted RBP17.09■□□□□ 0.33
FXN-202ENST00000396364 RBM14Q96PK6 669 aaKnown RBP17.09■□□□□ 0.33
FXN-202ENST00000396364 SLC25A33Q9BSK2 321 aa17.09■□□□□ 0.33
FXN-202ENST00000396364 RSRP1Q9BUV0 290 aa17.09■□□□□ 0.33
FXN-202ENST00000396364 C14orf166Q9Y224 244 aaKnown RBP17.09■□□□□ 0.33
FXN-202ENST00000396364 GPR137BO60478 399 aa17.08■□□□□ 0.32
FXN-202ENST00000396364 IGLV2-14P01704 120 aa17.08■□□□□ 0.32
FXN-202ENST00000396364 GLDNQ6ZMI3 551 aaPredicted RBP17.08■□□□□ 0.32
FXN-202ENST00000396364 TCTEX1D1Q8N7M0 179 aa17.08■□□□□ 0.32
FXN-202ENST00000396364 ZNF383Q8NA42 475 aa17.08■□□□□ 0.32
FXN-202ENST00000396364 OR4C13Q8NGP0 309 aa17.08■□□□□ 0.32
FXN-202ENST00000396364 FLYWCH2Q96CP2 140 aaKnown RBP17.08■□□□□ 0.32
FXN-202ENST00000396364 NPFFR1Q9GZQ6 430 aa17.08■□□□□ 0.32
FXN-202ENST00000396364 HNF4GQ14541 408 aa17.07■□□□□ 0.32
FXN-202ENST00000396364 TMEM219Q86XT9 240 aa17.07■□□□□ 0.32
FXN-202ENST00000396364 CD300LFQ8TDQ1 290 aa17.07■□□□□ 0.32
FXN-202ENST00000396364 TSC22D3Q99576 134 aa17.07■□□□□ 0.32
FXN-202ENST00000396364 SLC25A21Q9BQT8 299 aaPredicted RBP17.07■□□□□ 0.32
FXN-202ENST00000396364 LIN7CQ9NUP9 197 aaKnown RBP17.07■□□□□ 0.32
FXN-202ENST00000396364 KIAA1456Q9P272 454 aa17.07■□□□□ 0.32
FXN-202ENST00000396364 MOB4Q9Y3A3 225 aa17.07■□□□□ 0.32
FXN-202ENST00000396364 LINC00854A0A1B0GVQ3 168 aa17.06■□□□□ 0.32
FXN-202ENST00000396364 TNFSF12O43508 249 aa17.06■□□□□ 0.32
FXN-202ENST00000396364 C11orf88Q6PI97 169 aa17.06■□□□□ 0.32
FXN-202ENST00000396364 OR4S2Q8NH73 311 aa17.06■□□□□ 0.32
FXN-202ENST00000396364 MARCH1Q8TCQ1 289 aa17.06■□□□□ 0.32
FXN-202ENST00000396364 C5orf30Q96GV9 206 aa17.06■□□□□ 0.32
FXN-202ENST00000396364 TSNAXQ99598 290 aaKnown RBP17.06■□□□□ 0.32
FXN-202ENST00000396364 AIFM2Q9BRQ8 373 aa17.06■□□□□ 0.32
FXN-202ENST00000396364 COPZ2Q9P299 210 aa17.06■□□□□ 0.32
FXN-202ENST00000396364 SETD2Q9BYW2 2564 aaPredicted RBP17.05■□□□□ 0.32
FXN-202ENST00000396364 FAM181BA6NEQ2 426 aa17.05■□□□□ 0.32
FXN-202ENST00000396364 NCBP2LA6PVI3 153 aaKnown RBP17.05■□□□□ 0.32
FXN-202ENST00000396364 LINC00473A8K010 186 aa17.05■□□□□ 0.32
FXN-202ENST00000396364 FGF16O43320 207 aa17.05■□□□□ 0.32
FXN-202ENST00000396364 UPK1BO75841 260 aa17.05■□□□□ 0.32
FXN-202ENST00000396364 CTSDP07339 412 aaPredicted RBP17.05■□□□□ 0.32
FXN-202ENST00000396364 LGALS7P47929 136 aa17.05■□□□□ 0.32
FXN-202ENST00000396364 PHLDA2Q53GA4 152 aa17.05■□□□□ 0.32
FXN-202ENST00000396364 MZT2BQ6NZ67 158 aa17.05■□□□□ 0.32
FXN-202ENST00000396364 OR13C8Q8NGS7 320 aa17.05■□□□□ 0.32
FXN-202ENST00000396364 OSR1Q8TAX0 266 aaPredicted RBP17.05■□□□□ 0.32
FXN-202ENST00000396364 DDB2Q92466 427 aa17.05■□□□□ 0.32
FXN-202ENST00000396364 RANBP3Q9H6Z4 567 aaPredicted RBP17.05■□□□□ 0.32
FXN-202ENST00000396364 SLC2A9Q9NRM0 540 aa17.05■□□□□ 0.32
FXN-202ENST00000396364 FCGR3BO75015 233 aa17.04■□□□□ 0.32
FXN-202ENST00000396364 PGLYRP1O75594 196 aaPredicted RBP17.04■□□□□ 0.32
FXN-202ENST00000396364 RLN1P04808 185 aa17.04■□□□□ 0.32
FXN-202ENST00000396364 PIGPP57054 158 aa17.04■□□□□ 0.32
FXN-202ENST00000396364 RND3P61587 244 aa17.04■□□□□ 0.32
FXN-202ENST00000396364 RPS16P62249 146 aaKnown RBP17.04■□□□□ 0.32
FXN-202ENST00000396364 EIF4EBP1Q13541 118 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms