RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 KLRD1Q13241 179 aa12.55□□□□□ -0.4
VAMP1-202ENST00000396308 EIF4EBP1Q13541 118 aaPredicted RBP12.55□□□□□ -0.4
VAMP1-202ENST00000396308 UTF1Q5T230 341 aa12.55□□□□□ -0.4
VAMP1-202ENST00000396308 MINOS1Q5TGZ0 78 aa12.55□□□□□ -0.4
VAMP1-202ENST00000396308 THOC7Q6I9Y2 204 aaKnown RBP12.55□□□□□ -0.4
VAMP1-202ENST00000396308 DHRS7BQ6IAN0 325 aaPredicted RBP12.55□□□□□ -0.4
VAMP1-202ENST00000396308 CCDC144NLQ6NUI1 221 aa12.55□□□□□ -0.4
VAMP1-202ENST00000396308 ODF3L1Q8IXM7 274 aa12.55□□□□□ -0.4
VAMP1-202ENST00000396308 OR5M8Q8NGP6 311 aa12.55□□□□□ -0.4
VAMP1-202ENST00000396308 GLYATL2Q8WU03 294 aa12.55□□□□□ -0.4
VAMP1-202ENST00000396308 LHX4Q969G2 390 aa12.55□□□□□ -0.4
VAMP1-202ENST00000396308 TMEM56Q96MV1 263 aa12.55□□□□□ -0.4
VAMP1-202ENST00000396308 TMED3Q9Y3Q3 217 aa12.55□□□□□ -0.4
VAMP1-202ENST00000396308 TBL2Q9Y4P3 447 aaKnown RBP12.55□□□□□ -0.4
VAMP1-202ENST00000396308 MINOS1-NBL1R4GNA1 71 aa12.55□□□□□ -0.4
VAMP1-202ENST00000396308 TMEM56-RWDD3S4R434 201 aa12.55□□□□□ -0.4
VAMP1-202ENST00000396308 ITPR2Q14571 2701 aa12.55□□□□□ -0.4
VAMP1-202ENST00000396308 CR1P17927 2039 aa12.55□□□□□ -0.4
VAMP1-202ENST00000396308 ARHGAP32A7KAX9 2087 aa12.55□□□□□ -0.4
VAMP1-202ENST00000396308 OOSP1A8MZH6 123 aa12.54□□□□□ -0.4
VAMP1-202ENST00000396308 FCGR3BO75015 233 aa12.54□□□□□ -0.4
VAMP1-202ENST00000396308 CDS2O95674 445 aa12.54□□□□□ -0.4
VAMP1-202ENST00000396308 HOXB5P09067 269 aa12.54□□□□□ -0.4
VAMP1-202ENST00000396308 MMP9P14780 707 aa12.54□□□□□ -0.4
VAMP1-202ENST00000396308 CYCSP99999 105 aaKnown RBP12.54□□□□□ -0.4
VAMP1-202ENST00000396308 TMEM249Q2WGJ8 235 aa12.54□□□□□ -0.4
VAMP1-202ENST00000396308 KRTAP1-3Q8IUG1 177 aa12.54□□□□□ -0.4
VAMP1-202ENST00000396308 DRAXINQ8NBI3 349 aaPredicted RBP12.54□□□□□ -0.4
VAMP1-202ENST00000396308 OR11H7Q8NGC8 314 aa12.54□□□□□ -0.4
VAMP1-202ENST00000396308 OR4P4Q8NGL7 312 aa12.54□□□□□ -0.4
VAMP1-202ENST00000396308 MSI2Q96DH6 328 aaKnown RBP12.54□□□□□ -0.4
VAMP1-202ENST00000396308 RRNAD1Q96FB5 475 aaKnown RBP12.54□□□□□ -0.4
VAMP1-202ENST00000396308 C5orf30Q96GV9 206 aa12.54□□□□□ -0.4
VAMP1-202ENST00000396308 TBX15Q96SF7 602 aa12.54□□□□□ -0.4
VAMP1-202ENST00000396308 AIFM2Q9BRQ8 373 aa12.54□□□□□ -0.4
VAMP1-202ENST00000396308 ZNF436Q9C0F3 470 aaPredicted RBP12.54□□□□□ -0.4
VAMP1-202ENST00000396308 C7orf69Q9H7B7 122 aa12.54□□□□□ -0.4
VAMP1-202ENST00000396308 SLC35D1Q9NTN3 355 aa12.54□□□□□ -0.4
VAMP1-202ENST00000396308 PRR13Q9NZ81 148 aa12.54□□□□□ -0.4
VAMP1-202ENST00000396308 COMMD9Q9P000 198 aa12.54□□□□□ -0.4
VAMP1-202ENST00000396308 ZNRD1Q9P1U0 126 aa12.54□□□□□ -0.4
VAMP1-202ENST00000396308 DPM3Q9P2X0 92 aa12.54□□□□□ -0.4
VAMP1-202ENST00000396308 FBN2P35556 2912 aa12.54□□□□□ -0.4
VAMP1-202ENST00000396308 C13orf42A0A1B0GVH6 325 aa12.53□□□□□ -0.4
VAMP1-202ENST00000396308 DBX1A6NMT0 343 aa12.53□□□□□ -0.4
VAMP1-202ENST00000396308 LINC00473A8K010 186 aa12.53□□□□□ -0.4
VAMP1-202ENST00000396308 ODF3BA8MYP8 253 aa12.53□□□□□ -0.4
VAMP1-202ENST00000396308 H7C2Y5 167 aa12.53□□□□□ -0.4
VAMP1-202ENST00000396308 HPRT1P00492 218 aa12.53□□□□□ -0.4
VAMP1-202ENST00000396308 TGFAP01135 160 aa12.53□□□□□ -0.4
VAMP1-202ENST00000396308 GIPP09681 153 aaPredicted RBP12.53□□□□□ -0.4
VAMP1-202ENST00000396308 MC5RP33032 325 aa12.53□□□□□ -0.4
VAMP1-202ENST00000396308 LPAR6P43657 344 aa12.53□□□□□ -0.4
VAMP1-202ENST00000396308 DLX1P56177 255 aa12.53□□□□□ -0.4
VAMP1-202ENST00000396308 RAP2BP61225 183 aa12.53□□□□□ -0.4
VAMP1-202ENST00000396308 RPL30P62888 115 aaKnown RBP12.53□□□□□ -0.4
VAMP1-202ENST00000396308 ZNF816Q0VGE8 651 aaPredicted RBP12.53□□□□□ -0.4
VAMP1-202ENST00000396308 MIDNQ504T8 468 aa12.53□□□□□ -0.4
VAMP1-202ENST00000396308 TPTE2P1Q5T6R2 138 aa12.53□□□□□ -0.4
VAMP1-202ENST00000396308 GPR157Q5UAW9 335 aa12.53□□□□□ -0.4
VAMP1-202ENST00000396308 CYB5R2Q6BCY4 276 aa12.53□□□□□ -0.4
VAMP1-202ENST00000396308 SLC35G3Q8N808 338 aa12.53□□□□□ -0.4
VAMP1-202ENST00000396308 PPP1R14BQ96C90 147 aa12.53□□□□□ -0.4
VAMP1-202ENST00000396308 ZNF251Q9BRH9 671 aa12.53□□□□□ -0.4
VAMP1-202ENST00000396308 MRPL20Q9BYC9 149 aaKnown RBP12.53□□□□□ -0.4
VAMP1-202ENST00000396308 PLEKHA2Q9HB19 425 aa12.53□□□□□ -0.4
VAMP1-202ENST00000396308 RNASEK-C17orf49H0YIS7 233 aa12.52□□□□□ -0.41
VAMP1-202ENST00000396308 CCSO14618 274 aa12.52□□□□□ -0.41
VAMP1-202ENST00000396308 IGHV4-31P0DP07 118 aa12.52□□□□□ -0.41
VAMP1-202ENST00000396308 HLA-GP17693 338 aa12.52□□□□□ -0.41
VAMP1-202ENST00000396308 VDAC1P21796 283 aa12.52□□□□□ -0.41
VAMP1-202ENST00000396308 REG1BP48304 166 aa12.52□□□□□ -0.41
VAMP1-202ENST00000396308 PRB3Q04118 309 aaPredicted RBP12.52□□□□□ -0.41
VAMP1-202ENST00000396308 PDPNQ86YL7 162 aa12.52□□□□□ -0.41
VAMP1-202ENST00000396308 FAM219AQ8IW50 185 aa12.52□□□□□ -0.41
VAMP1-202ENST00000396308 PDZD9Q8IXQ8 264 aa12.52□□□□□ -0.41
VAMP1-202ENST00000396308 SELENOHQ8IZQ5 122 aaKnown RBP12.52□□□□□ -0.41
VAMP1-202ENST00000396308 OR8H3Q8N146 312 aa12.52□□□□□ -0.41
VAMP1-202ENST00000396308 TEX29Q8N6K0 151 aa12.52□□□□□ -0.41
VAMP1-202ENST00000396308 WFDC11Q8NEX6 87 aa12.52□□□□□ -0.41
VAMP1-202ENST00000396308 ST6GALNAC6Q969X2 333 aa12.52□□□□□ -0.41
VAMP1-202ENST00000396308 C18orf12Q96KH6 178 aa12.52□□□□□ -0.41
VAMP1-202ENST00000396308 CHIAQ9BZP6 476 aa12.52□□□□□ -0.41
VAMP1-202ENST00000396308 WASHC3Q9Y3C0 194 aa12.52□□□□□ -0.41
VAMP1-202ENST00000396308 CELSR2Q9HCU4 2923 aa12.52□□□□□ -0.41
VAMP1-202ENST00000396308 ABCA2Q9BZC7 2435 aa12.51□□□□□ -0.41
VAMP1-202ENST00000396308 TRAV40A0A0B4J280 105 aa12.51□□□□□ -0.41
VAMP1-202ENST00000396308 A0A1W2PRD5 423 aa12.51□□□□□ -0.41
VAMP1-202ENST00000396308 A0A1W2PRF3 423 aa12.51□□□□□ -0.41
VAMP1-202ENST00000396308 A0A1W2PRM7 423 aa12.51□□□□□ -0.41
VAMP1-202ENST00000396308 A8MV72 311 aaPredicted RBP12.51□□□□□ -0.41
VAMP1-202ENST00000396308 NPFFO15130 113 aa12.51□□□□□ -0.41
VAMP1-202ENST00000396308 ADAP1O75689 374 aa12.51□□□□□ -0.41
VAMP1-202ENST00000396308 CRYZL1O95825 349 aa12.51□□□□□ -0.41
VAMP1-202ENST00000396308 HRASP01112 189 aa12.51□□□□□ -0.41
VAMP1-202ENST00000396308 CT45A6P0DMU7 189 aa12.51□□□□□ -0.41
VAMP1-202ENST00000396308 CT45A5P0DMU8 189 aa12.51□□□□□ -0.41
VAMP1-202ENST00000396308 CT45A7P0DMV0 189 aa12.51□□□□□ -0.41
VAMP1-202ENST00000396308 CXCL3P19876 107 aa12.51□□□□□ -0.41
VAMP1-202ENST00000396308 GGNBP1Q5YKI7 109 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms