RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 BVESQ8NE79 360 aa16.03■□□□□ 0.16
TRAF4-203ENST00000394925 CYGBQ8WWM9 190 aa16.03■□□□□ 0.16
TRAF4-203ENST00000394925 PTX4Q96A99 478 aa16.03■□□□□ 0.16
TRAF4-203ENST00000394925 TINAGL1Q9GZM7 467 aaPredicted RBP16.03■□□□□ 0.16
TRAF4-203ENST00000394925 RIMS4Q9H426 269 aaPredicted RBP16.03■□□□□ 0.16
TRAF4-203ENST00000394925 SLC35D1Q9NTN3 355 aa16.03■□□□□ 0.16
TRAF4-203ENST00000394925 COA4Q9NYJ1 87 aa16.03■□□□□ 0.16
TRAF4-203ENST00000394925 SIGLEC8Q9NYZ4 499 aa16.03■□□□□ 0.16
TRAF4-203ENST00000394925 A0A0A6YYD4 124 aa16.02■□□□□ 0.16
TRAF4-203ENST00000394925 TRBV6-6A0A0A6YYG2 114 aa16.02■□□□□ 0.16
TRAF4-203ENST00000394925 M0R1X1 148 aa16.02■□□□□ 0.16
TRAF4-203ENST00000394925 WNT4P56705 351 aa16.02■□□□□ 0.16
TRAF4-203ENST00000394925 DYRK1AQ13627 763 aa16.02■□□□□ 0.16
TRAF4-203ENST00000394925 LINC00322Q6ZN03 302 aaPredicted RBP16.02■□□□□ 0.16
TRAF4-203ENST00000394925 LRRTM1Q86UE6 522 aa16.02■□□□□ 0.16
TRAF4-203ENST00000394925 TMEM68Q96MH6 324 aa16.02■□□□□ 0.16
TRAF4-203ENST00000394925 TMEM14DPA8MWL7 114 aa16.01■□□□□ 0.15
TRAF4-203ENST00000394925 MYL12BO14950 172 aa16.01■□□□□ 0.15
TRAF4-203ENST00000394925 SOCS1O15524 211 aa16.01■□□□□ 0.15
TRAF4-203ENST00000394925 IGLV2-23P01705 113 aa16.01■□□□□ 0.15
TRAF4-203ENST00000394925 APELAP0DMC3 54 aa16.01■□□□□ 0.15
TRAF4-203ENST00000394925 LGALS7P47929 136 aa16.01■□□□□ 0.15
TRAF4-203ENST00000394925 CD81P60033 236 aa16.01■□□□□ 0.15
TRAF4-203ENST00000394925 ACSM3Q53FZ2 586 aa16.01■□□□□ 0.15
TRAF4-203ENST00000394925 RBM48Q5RL73 367 aaKnown RBP16.01■□□□□ 0.15
TRAF4-203ENST00000394925 OR2A4O95047 310 aa16■□□□□ 0.15
TRAF4-203ENST00000394925 BRI3O95415 125 aa16■□□□□ 0.15
TRAF4-203ENST00000394925 CRYGBP07316 175 aa16■□□□□ 0.15
TRAF4-203ENST00000394925 QRFPP83859 136 aa16■□□□□ 0.15
TRAF4-203ENST00000394925 TTC23Q5W5X9 447 aa16■□□□□ 0.15
TRAF4-203ENST00000394925 SETD9Q8NE22 299 aa16■□□□□ 0.15
TRAF4-203ENST00000394925 USMG5Q96IX5 58 aa16■□□□□ 0.15
TRAF4-203ENST00000394925 NEURL2Q9BR09 285 aa16■□□□□ 0.15
TRAF4-203ENST00000394925 Q9N2K0 584 aa16■□□□□ 0.15
TRAF4-203ENST00000394925 MGAT4AQ9UM21 535 aa16■□□□□ 0.15
TRAF4-203ENST00000394925 RBMXL2O75526 392 aaKnown RBP15.99■□□□□ 0.15
TRAF4-203ENST00000394925 TPPPO94811 219 aa15.99■□□□□ 0.15
TRAF4-203ENST00000394925 MECP2P51608 486 aaKnown RBP15.99■□□□□ 0.15
TRAF4-203ENST00000394925 OR2K2Q8NGT1 345 aa15.99■□□□□ 0.15
TRAF4-203ENST00000394925 SNAPC3Q92966 411 aa15.99■□□□□ 0.15
TRAF4-203ENST00000394925 HARBI1Q96MB7 349 aa15.99■□□□□ 0.15
TRAF4-203ENST00000394925 PHB2Q99623 299 aa15.99■□□□□ 0.15
TRAF4-203ENST00000394925 LPAR5Q9H1C0 372 aa15.99■□□□□ 0.15
TRAF4-203ENST00000394925 RDH8Q9NYR8 311 aa15.99■□□□□ 0.15
TRAF4-203ENST00000394925 PEMTQ9UBM1 199 aa15.99■□□□□ 0.15
TRAF4-203ENST00000394925 A0A0B4J203 849 aa15.98■□□□□ 0.15
TRAF4-203ENST00000394925 IGKV1-6A0A0C4DH72 117 aa15.98■□□□□ 0.15
TRAF4-203ENST00000394925 AHSA2Q719I0 299 aa15.98■□□□□ 0.15
TRAF4-203ENST00000394925 DEFB125Q8N687 156 aa15.98■□□□□ 0.15
TRAF4-203ENST00000394925 PHYHIPQ92561 330 aa15.98■□□□□ 0.15
TRAF4-203ENST00000394925 RBMY1BA6NDE4 496 aaKnown RBP15.97■□□□□ 0.15
TRAF4-203ENST00000394925 RBMY1EA6NEQ0 496 aaKnown RBP15.97■□□□□ 0.15
TRAF4-203ENST00000394925 MSGN1A6NI15 193 aa15.97■□□□□ 0.15
TRAF4-203ENST00000394925 BPNT1O95861 308 aa15.97■□□□□ 0.15
TRAF4-203ENST00000394925 CD7P09564 240 aa15.97■□□□□ 0.15
TRAF4-203ENST00000394925 RBMY1DP0C7P1 496 aaKnown RBP15.97■□□□□ 0.15
TRAF4-203ENST00000394925 CD300EQ496F6 205 aaPredicted RBP15.97■□□□□ 0.15
TRAF4-203ENST00000394925 MS4A15Q8N5U1 240 aa15.97■□□□□ 0.15
TRAF4-203ENST00000394925 NANOGP1Q8N7R0 232 aa15.97■□□□□ 0.15
TRAF4-203ENST00000394925 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.97■□□□□ 0.15
TRAF4-203ENST00000394925 URM1Q9BTM9 101 aaKnown RBP15.97■□□□□ 0.15
TRAF4-203ENST00000394925 WFDC10AQ9H1F0 79 aa15.97■□□□□ 0.15
TRAF4-203ENST00000394925 C12orf4Q9NQ89 552 aa15.97■□□□□ 0.15
TRAF4-203ENST00000394925 SLC2A8Q9NY64 477 aa15.97■□□□□ 0.15
TRAF4-203ENST00000394925 PSORS1C1Q9UIG5 152 aa15.97■□□□□ 0.15
TRAF4-203ENST00000394925 ZNF785A8K8V0 405 aa15.96■□□□□ 0.15
TRAF4-203ENST00000394925 SHOXO15266 292 aa15.96■□□□□ 0.15
TRAF4-203ENST00000394925 SRMP19623 302 aa15.96■□□□□ 0.15
TRAF4-203ENST00000394925 P2RY14Q15391 338 aa15.96■□□□□ 0.15
TRAF4-203ENST00000394925 RNLSQ5VYX0 342 aa15.96■□□□□ 0.15
TRAF4-203ENST00000394925 ADAD2Q8NCV1 583 aaKnown RBP15.96■□□□□ 0.15
TRAF4-203ENST00000394925 OR6M1Q8NGM8 313 aa15.96■□□□□ 0.15
TRAF4-203ENST00000394925 SRD5A3Q9H8P0 318 aa15.96■□□□□ 0.15
TRAF4-203ENST00000394925 SRRM4A7MD48 611 aaKnown RBP15.95■□□□□ 0.14
TRAF4-203ENST00000394925 TRDCB7Z8K6 153 aa15.95■□□□□ 0.14
TRAF4-203ENST00000394925 BMPR1BO00238 502 aa15.95■□□□□ 0.14
TRAF4-203ENST00000394925 AIREO43918 545 aa15.95■□□□□ 0.14
TRAF4-203ENST00000394925 TMEM50BP56557 158 aa15.95■□□□□ 0.14
TRAF4-203ENST00000394925 MRGPRG-AS1Q2M3A8 158 aa15.95■□□□□ 0.14
TRAF4-203ENST00000394925 HSD17B12Q53GQ0 312 aa15.95■□□□□ 0.14
TRAF4-203ENST00000394925 LAIR2Q6ISS4 152 aa15.95■□□□□ 0.14
TRAF4-203ENST00000394925 CEACAM19Q7Z692 300 aa15.95■□□□□ 0.14
TRAF4-203ENST00000394925 LAX1Q8IWV1 398 aa15.95■□□□□ 0.14
TRAF4-203ENST00000394925 FAM89BQ8N5H3 189 aa15.95■□□□□ 0.14
TRAF4-203ENST00000394925 DHRSXQ8N5I4 330 aa15.95■□□□□ 0.14
TRAF4-203ENST00000394925 DYNLRB2Q8TF09 96 aa15.95■□□□□ 0.14
TRAF4-203ENST00000394925 ARHGAP5-AS1Q96IT6 56 aa15.95■□□□□ 0.14
TRAF4-203ENST00000394925 CMSS1Q9BQ75 279 aaKnown RBP15.95■□□□□ 0.14
TRAF4-203ENST00000394925 OR2D2Q9H210 308 aa15.95■□□□□ 0.14
TRAF4-203ENST00000394925 SDHAF2Q9NX18 166 aa15.95■□□□□ 0.14
TRAF4-203ENST00000394925 HSF4Q9ULV5 492 aa15.95■□□□□ 0.14
TRAF4-203ENST00000394925 FOXI3A8MTJ6 420 aaPredicted RBP15.94■□□□□ 0.14
TRAF4-203ENST00000394925 PRH1P02810 166 aa15.94■□□□□ 0.14
TRAF4-203ENST00000394925 CD3GP09693 182 aa15.94■□□□□ 0.14
TRAF4-203ENST00000394925 OR9G9P0C7N8 305 aa15.94■□□□□ 0.14
TRAF4-203ENST00000394925 CD37P11049 281 aa15.94■□□□□ 0.14
TRAF4-203ENST00000394925 RHOGP84095 191 aa15.94■□□□□ 0.14
TRAF4-203ENST00000394925 CBX3Q13185 183 aa15.94■□□□□ 0.14
TRAF4-203ENST00000394925 EXOSC2Q13868 293 aaKnown RBP15.94■□□□□ 0.14
TRAF4-203ENST00000394925 TNXAQ16473 311 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms