RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 PITX3O75364 302 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 CD33P20138 364 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 MDH2P40926 338 aaKnown RBP4.88□□□□□ -1.63
RFFL-202ENST00000394597 CDKN1BP46527 198 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 ZNF83P51522 516 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 GPM6AP51674 278 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 PRRX1P54821 245 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 TIGITQ495A1 244 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 WDR73Q6P4I2 378 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 BHLHA15Q7RTS1 189 aaPredicted RBP4.88□□□□□ -1.63
RFFL-202ENST00000394597 ADAT3Q96EY9 351 aaPredicted RBP4.88□□□□□ -1.63
RFFL-202ENST00000394597 DECR2Q9NUI1 292 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 KIR2DS1A0A191URI9 304 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 C3orf85A0A1B0GTC6 90 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 NKX2-6A6NCS4 301 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 LRRC3CA6NJW4 275 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 C11orf94C9JXX5 98 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 HAND1O96004 215 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 ZNF735P0CB33 412 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 CEACAM8P31997 349 aaPredicted RBP4.88□□□□□ -1.63
RFFL-202ENST00000394597 KIR2DS4P43632 304 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 TMPRSS3P57727 454 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 KIR2DS1Q14954 304 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 RTP5Q14D33 572 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 SNAI3Q3KNW1 292 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 C12orf54Q6X4T0 127 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 MRPL52Q86TS9 123 aaKnown RBP4.88□□□□□ -1.63
RFFL-202ENST00000394597 RNASEH2CQ8TDP1 164 aaKnown RBP4.88□□□□□ -1.63
RFFL-202ENST00000394597 ORAOV1Q8WV07 137 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 TMEM45BQ96B21 275 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 P2RX4Q99571 388 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 RSG1Q9BU20 258 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 ABHD14AQ9BUJ0 271 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 MRPL13Q9BYD1 178 aaKnown RBP4.88□□□□□ -1.63
RFFL-202ENST00000394597 ENY2Q9NPA8 101 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 MPC1Q9Y5U8 109 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 NOTCH3Q9UM47 2321 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 IGKV1D-43A0A0B4J1Z2 117 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 NKX6-3A6NJ46 265 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 M0QZ24 198 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 PAGE4O60829 102 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 SMPD2O60906 423 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 CTSSP25774 331 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 ICAM4Q14773 271 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 PMCHL1Q16048 86 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 FBXL14Q8N1E6 418 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 CHRDL1Q9BU40 450 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 HINT2Q9BX68 163 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 LINC00470Q9BZP3 86 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 GP6Q9HCN6 339 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 SDF2L1Q9HCN8 221 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 FAM206AQ9NX38 181 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 ANXA10Q9UJ72 324 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 POLR3KQ9Y2Y1 108 aaPredicted RBP4.88□□□□□ -1.63
RFFL-202ENST00000394597 A0A087WV48 116 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 CLEC18AA5D8T8 446 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 DPRXA6NFQ7 191 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 LRRC30A6NM36 301 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 CDS2O95674 445 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 CTXN2P0C2S0 81 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 FSTP19883 344 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 SPINK2P20155 84 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 CA6P23280 308 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 COMPP49747 757 aaPredicted RBP4.87□□□□□ -1.63
RFFL-202ENST00000394597 SELENOTP62341 195 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 PLAURQ03405 335 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 SRSF4Q08170 494 aaKnown RBP4.87□□□□□ -1.63
RFFL-202ENST00000394597 KCNMB1Q16558 191 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 FFAR4Q5NUL3 377 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 TPTE2P1Q5T6R2 138 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 VWA1Q6PCB0 445 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 CLEC18CQ8NCF0 446 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 OR10G4Q8NGN3 311 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 OR10G9Q8NGN4 311 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 OR10G7Q8NGN6 311 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 OR5B3Q8NH48 314 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 RBKSQ9H477 322 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 G6PC2Q9NQR9 355 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 CISD1Q9NZ45 108 aaKnown RBP4.87□□□□□ -1.63
RFFL-202ENST00000394597 TUBD1Q9UJT1 453 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 PPIAL4AQ9Y536 164 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 MPDZO75970 2070 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 IGHV3-64DA0A0J9YX35 117 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 PINLYPA6NC86 204 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 MDP1Q86V88 176 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 RDH5Q92781 318 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 RAB40CQ96S21 281 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 SCNM1Q9BWG6 230 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 MRPL18Q9H0U6 180 aaKnown RBP4.87□□□□□ -1.63
RFFL-202ENST00000394597 MTCH1Q9NZJ7 389 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 OR5B21A6NL26 309 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 TMEM238C9JI98 176 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 DLL1O00548 723 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 KBTBD11O94819 623 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 NUDT3O95989 172 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 PRSS12P56730 875 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 OR8B8Q15620 311 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 PIP4P1Q86T03 277 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 OR8G5Q8NG78 346 aa4.87□□□□□ -1.63
RFFL-202ENST00000394597 OR52M1Q8NGK5 317 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms