RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 HNRNPA3P51991 378 aaKnown RBP9.65□□□□□ -0.86
TRAF3IP2-208ENST00000392556 EWSR1Q01844 656 aaKnown RBP eCLIP9.65□□□□□ -0.86
TRAF3IP2-208ENST00000392556 PLPPR5Q32ZL2 321 aa9.65□□□□□ -0.86
TRAF3IP2-208ENST00000392556 TMEM41BQ5BJD5 291 aa9.65□□□□□ -0.86
TRAF3IP2-208ENST00000392556 UNQ5815/PRO19632Q6UWF5 114 aa9.65□□□□□ -0.86
TRAF3IP2-208ENST00000392556 LSRQ86X29 649 aaPredicted RBP9.65□□□□□ -0.86
TRAF3IP2-208ENST00000392556 ZNF611Q8N823 705 aa9.65□□□□□ -0.86
TRAF3IP2-208ENST00000392556 TMEM234Q8WY98 164 aa9.65□□□□□ -0.86
TRAF3IP2-208ENST00000392556 RTN4RQ9BZR6 473 aa9.65□□□□□ -0.86
TRAF3IP2-208ENST00000392556 EHFQ9NZC4 300 aa9.65□□□□□ -0.86
TRAF3IP2-208ENST00000392556 CRYM-AS1A6NIL9 109 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 OR5B21A6NL26 309 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 NUPR1O60356 82 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 IGKV1D-16P01601 117 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 CTSDP07339 412 aaPredicted RBP9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 FAHP16930 419 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 TUBG1P23258 451 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 TAS2R46P59540 309 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 OR4C3Q8NH37 302 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 IGFBPL1Q8WX77 278 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 TMEM204Q9BSN7 226 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 MRPL13Q9BYD1 178 aaKnown RBP9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 LPAR5Q9H1C0 372 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 ELOVL3Q9HB03 270 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 SLC22A13Q9Y226 551 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 VDAC3Q9Y277 283 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 ZNF320A2RRD8 509 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 ST8SIA3O43173 380 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 VSIG8P0DPA2 414 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 PLAURQ03405 335 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 BSXQ3C1V8 233 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 PRR27Q6MZM9 219 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 LRP11Q86VZ4 500 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 C1orf174Q8IYL3 243 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 PNKDQ8N490 385 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 LRTM2Q8N967 370 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 OR6N2Q8NGY6 317 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 OR5B3Q8NH48 314 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 OTOSQ8NHW6 89 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 BCL2L2Q92843 193 aaPredicted RBP9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 SLAMF6Q96DU3 332 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 C11orf1Q9H5F2 150 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 RNF24Q9Y225 148 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 PXMP4Q9Y6I8 212 aa9.64□□□□□ -0.87
TRAF3IP2-208ENST00000392556 IGHV1-69-2A0A0G2JMI3 117 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 TMEM14DPA8MWL7 114 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 J3QW42 95 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 HS3ST1O14792 307 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 CXCL13O43927 109 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 HYPMO75409 117 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 ROM1Q03395 351 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 SNAI3Q3KNW1 292 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 DCST2Q5T1A1 773 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 Q6ZN92 141 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 DPY19L4Q7Z388 723 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 OR4S2Q8NH73 311 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 VN1R17PQ8TDU5 208 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 WFDC12Q8WWY7 111 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 Q96MF0 132 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 REPIN1Q9BWE0 567 aaKnown RBP9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 MANBALQ9NQG1 85 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 SLC35D1Q9NTN3 355 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 SMPXQ9UHP9 88 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 C17orf51A8MQB3 221 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 CNOT4O95628 575 aaKnown RBP9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 THBDP07204 575 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 SCGB1A1P11684 91 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 DUSP1P28562 367 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 SLC6A8P48029 635 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 CST9LP1Q5W188 147 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 KCNIP4Q6PIL6 250 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 FAM216AQ8WUB2 273 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 TSSK2Q96PF2 358 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 TXN2Q99757 166 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 OR51I2Q9H344 312 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 KLHL13Q9P2N7 655 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 GNG13Q9P2W3 67 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 CLN8Q9UBY8 286 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 HHLA2Q9UM44 414 aa9.63□□□□□ -0.87
TRAF3IP2-208ENST00000392556 NF1P21359 2839 aa9.62□□□□□ -0.87
TRAF3IP2-208ENST00000392556 A0A0J9YW62 118 aa9.62□□□□□ -0.87
TRAF3IP2-208ENST00000392556 ZNF814B7Z6K7 855 aa9.62□□□□□ -0.87
TRAF3IP2-208ENST00000392556 LY6G6DO95868 133 aa9.62□□□□□ -0.87
TRAF3IP2-208ENST00000392556 ISG15P05161 165 aa9.62□□□□□ -0.87
TRAF3IP2-208ENST00000392556 DBHP09172 617 aa9.62□□□□□ -0.87
TRAF3IP2-208ENST00000392556 HIST1H1DP16402 221 aaKnown RBP9.62□□□□□ -0.87
TRAF3IP2-208ENST00000392556 AMY2BP19961 511 aa9.62□□□□□ -0.87
TRAF3IP2-208ENST00000392556 FKBP2P26885 142 aaKnown RBP9.62□□□□□ -0.87
TRAF3IP2-208ENST00000392556 BIDP55957 195 aa9.62□□□□□ -0.87
TRAF3IP2-208ENST00000392556 SUMO1P63165 101 aaKnown RBP9.62□□□□□ -0.87
TRAF3IP2-208ENST00000392556 ADIRFQ15847 76 aa9.62□□□□□ -0.87
TRAF3IP2-208ENST00000392556 SPATA45Q537H7 98 aa9.62□□□□□ -0.87
TRAF3IP2-208ENST00000392556 SLC25A53Q5H9E4 307 aa9.62□□□□□ -0.87
TRAF3IP2-208ENST00000392556 TMEM123Q8N131 208 aa9.62□□□□□ -0.87
TRAF3IP2-208ENST00000392556 KLHDC1Q8N7A1 406 aa9.62□□□□□ -0.87
TRAF3IP2-208ENST00000392556 ZNF709Q8N972 641 aa9.62□□□□□ -0.87
TRAF3IP2-208ENST00000392556 LRRC75AQ8NAA5 344 aa9.62□□□□□ -0.87
TRAF3IP2-208ENST00000392556 NECAP1Q8NC96 275 aa9.62□□□□□ -0.87
TRAF3IP2-208ENST00000392556 ZNF519Q8TB69 540 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms