RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 ATP6V1C1P21283 382 aa-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 OPRM1P35372 400 aa-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 STX5Q13190 355 aa-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 SCGB2A2Q13296 93 aa-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 TPD52L1Q16890 204 aaPredicted RBP-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 AMTNQ6UX39 209 aa-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 FAM19A3Q7Z5A8 133 aa-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 PHF13Q86YI8 300 aaPredicted RBP-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 CCDC170Q8IYT3 715 aa-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 LRRC75A-AS1Q8N1F1 130 aa-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 CHD5Q8TDI0 1954 aa-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 CASTOR1Q8WTX7 329 aa-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 CABS1Q96KC9 395 aa-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 CCDC43Q96MW1 224 aaKnown RBP-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 ZMAT2Q96NC0 199 aaKnown RBP-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 SCGB3A2Q96PL1 93 aa-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 ATP6V0BQ99437 205 aa-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 SLC50A1Q9BRV3 221 aa-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 TTTY13Q9BZ97 58 aa-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 SHCBP1LQ9BZQ2 653 aa-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 ZYG11BQ9C0D3 744 aa-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 LIN28AQ9H9Z2 209 aaKnown RBP-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 TMEM165Q9HC07 324 aa-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 DICER1Q9UPY3 1922 aaKnown RBP-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 POMPQ9Y244 141 aa-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 KLF12Q9Y4X4 402 aa-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 U3KQV3 271 aa-2.55□□□□□ -2.82
TRAJ53-201ENST00000390485 PLCE1Q9P212 2302 aa-2.56□□□□□ -2.82
TRAJ53-201ENST00000390485 DNAH9Q9NYC9 4486 aa-2.56□□□□□ -2.82
TRAJ53-201ENST00000390485 MAST2Q6P0Q8 1798 aa-2.56□□□□□ -2.82
TRAJ53-201ENST00000390485 A0A1B0GXF2 115 aa-2.56□□□□□ -2.82
TRAJ53-201ENST00000390485 SMCO2A6NFE2 343 aa-2.56□□□□□ -2.82
TRAJ53-201ENST00000390485 HMGB1P1B2RPK0 211 aaPredicted RBP-2.56□□□□□ -2.82
TRAJ53-201ENST00000390485 H3BSA7 217 aa-2.56□□□□□ -2.82
TRAJ53-201ENST00000390485 UBE2L6O14933 153 aa-2.56□□□□□ -2.82
TRAJ53-201ENST00000390485 MYO1DO94832 1006 aa-2.56□□□□□ -2.82
TRAJ53-201ENST00000390485 CLPSP04118 112 aa-2.56□□□□□ -2.82
TRAJ53-201ENST00000390485 TAS2R39P59534 338 aa-2.56□□□□□ -2.82
TRAJ53-201ENST00000390485 CBX3Q13185 183 aa-2.56□□□□□ -2.82
TRAJ53-201ENST00000390485 TMEM31Q5JXX7 168 aa-2.56□□□□□ -2.82
TRAJ53-201ENST00000390485 SFT2D1Q8WV19 159 aa-2.56□□□□□ -2.82
TRAJ53-201ENST00000390485 TMEM239Q8WW34 195 aa-2.56□□□□□ -2.82
TRAJ53-201ENST00000390485 TMEM106AQ96A25 262 aa-2.56□□□□□ -2.82
TRAJ53-201ENST00000390485 GALMQ96C23 342 aa-2.56□□□□□ -2.82
TRAJ53-201ENST00000390485 MIXL1Q9H2W2 232 aa-2.56□□□□□ -2.82
TRAJ53-201ENST00000390485 SLC39A9Q9NUM3 307 aa-2.56□□□□□ -2.82
TRAJ53-201ENST00000390485 RIF1Q5UIP0 2472 aaKnown RBP-2.57□□□□□ -2.82
TRAJ53-201ENST00000390485 TTC21AQ8NDW8 1320 aa-2.57□□□□□ -2.82
TRAJ53-201ENST00000390485 PIRO00625 290 aa-2.57□□□□□ -2.82
TRAJ53-201ENST00000390485 TCAPO15273 167 aa-2.57□□□□□ -2.82
TRAJ53-201ENST00000390485 CD160O95971 181 aa-2.57□□□□□ -2.82
TRAJ53-201ENST00000390485 TACSTD2P09758 323 aa-2.57□□□□□ -2.82
TRAJ53-201ENST00000390485 GFAPP14136 432 aa-2.57□□□□□ -2.82
TRAJ53-201ENST00000390485 TNNT2P45379 298 aaPredicted RBP-2.57□□□□□ -2.82
TRAJ53-201ENST00000390485 FXYD2P54710 66 aa-2.57□□□□□ -2.82
TRAJ53-201ENST00000390485 TAS2R45P59539 299 aa-2.57□□□□□ -2.82
TRAJ53-201ENST00000390485 RHOGP84095 191 aa-2.57□□□□□ -2.82
TRAJ53-201ENST00000390485 GNA12Q03113 381 aa-2.57□□□□□ -2.82
TRAJ53-201ENST00000390485 MAPK14Q16539 360 aa-2.57□□□□□ -2.82
TRAJ53-201ENST00000390485 SPATA45Q537H7 98 aa-2.57□□□□□ -2.82
TRAJ53-201ENST00000390485 SPESP1Q6UW49 350 aa-2.57□□□□□ -2.82
TRAJ53-201ENST00000390485 INO80EQ8NBZ0 244 aaPredicted RBP-2.57□□□□□ -2.82
TRAJ53-201ENST00000390485 RLN3Q8WXF3 142 aa-2.57□□□□□ -2.82
TRAJ53-201ENST00000390485 OR7D2Q96RA2 312 aa-2.57□□□□□ -2.82
TRAJ53-201ENST00000390485 TMEM43Q9BTV4 400 aa-2.57□□□□□ -2.82
TRAJ53-201ENST00000390485 RMND5AQ9H871 391 aa-2.57□□□□□ -2.82
TRAJ53-201ENST00000390485 BEX1Q9HBH7 125 aa-2.57□□□□□ -2.82
TRAJ53-201ENST00000390485 HS3ST2Q9Y278 367 aa-2.57□□□□□ -2.82
TRAJ53-201ENST00000390485 COQ4Q9Y3A0 265 aa-2.57□□□□□ -2.82
TRAJ53-201ENST00000390485 TBL2Q9Y4P3 447 aaKnown RBP-2.57□□□□□ -2.82
TRAJ53-201ENST00000390485 TRAV12-1A0A0B4J245 112 aa-2.58□□□□□ -2.82
TRAJ53-201ENST00000390485 OR6C6A6NF89 314 aa-2.58□□□□□ -2.82
TRAJ53-201ENST00000390485 TRIM64CA6NLI5 447 aa-2.58□□□□□ -2.82
TRAJ53-201ENST00000390485 H3BP45 60 aa-2.58□□□□□ -2.82
TRAJ53-201ENST00000390485 FIBPO43427 364 aa-2.58□□□□□ -2.82
TRAJ53-201ENST00000390485 HLA-HP01893 362 aa-2.58□□□□□ -2.82
TRAJ53-201ENST00000390485 SFTPCP11686 197 aa-2.58□□□□□ -2.82
TRAJ53-201ENST00000390485 MIFP14174 115 aa-2.58□□□□□ -2.82
TRAJ53-201ENST00000390485 SPRR1AP35321 89 aa-2.58□□□□□ -2.82
TRAJ53-201ENST00000390485 SEC61GP60059 68 aa-2.58□□□□□ -2.82
TRAJ53-201ENST00000390485 ACTBP60709 375 aa-2.58□□□□□ -2.82
TRAJ53-201ENST00000390485 RHOAP61586 193 aa-2.58□□□□□ -2.82
TRAJ53-201ENST00000390485 ACTG1P63261 375 aa-2.58□□□□□ -2.82
TRAJ53-201ENST00000390485 BST2Q10589 180 aaKnown RBP-2.58□□□□□ -2.82
TRAJ53-201ENST00000390485 SELENBP1Q13228 472 aa-2.58□□□□□ -2.82
TRAJ53-201ENST00000390485 TRMT5Q32P41 509 aaKnown RBP-2.58□□□□□ -2.82
TRAJ53-201ENST00000390485 IDNKQ5T6J7 187 aa-2.58□□□□□ -2.82
TRAJ53-201ENST00000390485 NT5CQ8TCD5 201 aa-2.58□□□□□ -2.82
TRAJ53-201ENST00000390485 NKX6-2Q9C056 277 aaPredicted RBP-2.58□□□□□ -2.82
TRAJ53-201ENST00000390485 PSTPIP2Q9H939 334 aa-2.58□□□□□ -2.82
TRAJ53-201ENST00000390485 RAB20Q9NX57 234 aa-2.58□□□□□ -2.82
TRAJ53-201ENST00000390485 NAT8Q9UHE5 227 aa-2.58□□□□□ -2.82
TRAJ53-201ENST00000390485 FUT9Q9Y231 359 aa-2.58□□□□□ -2.82
TRAJ53-201ENST00000390485 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-2.58□□□□□ -2.82
TRAJ53-201ENST00000390485 KBTBD11-OT1A0A1B0GTJ5 212 aa-2.59□□□□□ -2.82
TRAJ53-201ENST00000390485 B4DEV8 164 aa-2.59□□□□□ -2.82
TRAJ53-201ENST00000390485 LYZL6O75951 148 aa-2.59□□□□□ -2.82
TRAJ53-201ENST00000390485 PSMG1O95456 288 aa-2.59□□□□□ -2.82
TRAJ53-201ENST00000390485 CLTAP09496 248 aa-2.59□□□□□ -2.82
TRAJ53-201ENST00000390485 PSMA1P25786 263 aaKnown RBP-2.59□□□□□ -2.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms