RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 RHOBP62745 196 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 PJVKQ0ZLH3 352 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 DBX2Q6ZNG2 339 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 VKORC1L1Q8N0U8 176 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 C9orf62Q8N4C0 152 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 RPRMLQ8N4K4 120 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 OR1B1Q8NGR6 318 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 SAMD10Q9BYL1 202 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 PROB1E7EW31 1015 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 RNASEK-C17orf49H0YIS7 233 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 KIAA0141Q14154 515 aaPredicted RBP11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 HCP5Q6MZN7 132 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 OR5AC2Q9NZP5 309 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 WSB1Q9Y6I7 421 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 PLCE1Q9P212 2302 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 DUXBA0A1W2PPF3 345 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 MBD3L4A6NDZ8 208 aaPredicted RBP11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 MBD3L3A6NE82 208 aaPredicted RBP11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 MBD3L5A6NJ08 208 aaPredicted RBP11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 PGA5P0DJD9 388 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 LCN2P80188 198 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 FHL1Q13642 323 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 FAM78BQ5VT40 261 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 KDF1Q8NAX2 398 aaPredicted RBP11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 MBD3L2Q8NHZ7 208 aaPredicted RBP11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 SAT2Q96F10 170 aaPredicted RBP11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 NRIP2Q9BQI9 281 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 NDFIP1Q9BT67 221 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 METTL1Q9UBP6 276 aaKnown RBP11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 WASHC3Q9Y3C0 194 aa11.09□□□□□ -0.63
PTPRN2-202ENST00000389416 ANKHD1Q8IWZ3 2542 aaKnown RBP11.08□□□□□ -0.63
PTPRN2-202ENST00000389416 WT1P19544 449 aaPredicted RBP11.08□□□□□ -0.64
PTPRN2-202ENST00000389416 TMEM41BQ5BJD5 291 aa11.08□□□□□ -0.64
PTPRN2-202ENST00000389416 OR4F17Q8NGA8 305 aa11.08□□□□□ -0.64
PTPRN2-202ENST00000389416 OR10C1Q96KK4 312 aa11.08□□□□□ -0.64
PTPRN2-202ENST00000389416 TLNRD1Q9H1K6 362 aa11.08□□□□□ -0.64
PTPRN2-202ENST00000389416 MMP24Q9Y5R2 645 aa11.08□□□□□ -0.64
PTPRN2-202ENST00000389416 LEUTXA8MZ59 168 aa11.08□□□□□ -0.64
PTPRN2-202ENST00000389416 WDR82Q6UXN9 313 aa11.08□□□□□ -0.64
PTPRN2-202ENST00000389416 GPR146Q96CH1 333 aa11.08□□□□□ -0.64
PTPRN2-202ENST00000389416 CLEC7AQ9BXN2 247 aa11.08□□□□□ -0.64
PTPRN2-202ENST00000389416 PARP11Q9NR21 331 aa11.08□□□□□ -0.64
PTPRN2-202ENST00000389416 S1PR2O95136 353 aa11.08□□□□□ -0.64
PTPRN2-202ENST00000389416 MELTFP08582 738 aa11.08□□□□□ -0.64
PTPRN2-202ENST00000389416 PRB3Q04118 309 aaPredicted RBP11.08□□□□□ -0.64
PTPRN2-202ENST00000389416 RPL39P5Q59GN2 51 aa11.08□□□□□ -0.64
PTPRN2-202ENST00000389416 AAMDCQ9H7C9 122 aa11.08□□□□□ -0.64
PTPRN2-202ENST00000389416 SLC45A2Q9UMX9 530 aa11.08□□□□□ -0.64
PTPRN2-202ENST00000389416 MARCH11A6NNE9 402 aa11.08□□□□□ -0.64
PTPRN2-202ENST00000389416 CNN1P51911 297 aaKnown RBP11.08□□□□□ -0.64
PTPRN2-202ENST00000389416 RPL8P62917 257 aaKnown RBP11.08□□□□□ -0.64
PTPRN2-202ENST00000389416 TMEM252Q8N6L7 170 aa11.08□□□□□ -0.64
PTPRN2-202ENST00000389416 NEU4Q8WWR8 484 aaPredicted RBP11.08□□□□□ -0.64
PTPRN2-202ENST00000389416 NKX6-2Q9C056 277 aaPredicted RBP11.08□□□□□ -0.64
PTPRN2-202ENST00000389416 OR2C1O95371 312 aa11.07□□□□□ -0.64
PTPRN2-202ENST00000389416 TMEM88Q6PEY1 159 aa11.07□□□□□ -0.64
PTPRN2-202ENST00000389416 ZNF474Q6S9Z5 364 aaPredicted RBP11.07□□□□□ -0.64
PTPRN2-202ENST00000389416 POM121Q96HA1 1249 aa11.07□□□□□ -0.64
PTPRN2-202ENST00000389416 PATZ1Q9HBE1 687 aaKnown RBP11.07□□□□□ -0.64
PTPRN2-202ENST00000389416 SLC25A15Q9Y619 301 aa11.07□□□□□ -0.64
PTPRN2-202ENST00000389416 SLC24A4Q8NFF2 622 aa11.07□□□□□ -0.64
PTPRN2-202ENST00000389416 FOXH1O75593 365 aa11.07□□□□□ -0.64
PTPRN2-202ENST00000389416 PTBP3O95758 552 aaKnown RBP11.07□□□□□ -0.64
PTPRN2-202ENST00000389416 FAM106CPP0CH98 169 aa11.07□□□□□ -0.64
PTPRN2-202ENST00000389416 CCL3L1P16619 93 aa11.07□□□□□ -0.64
PTPRN2-202ENST00000389416 HLA-GP17693 338 aa11.07□□□□□ -0.64
PTPRN2-202ENST00000389416 ZNF90Q03938 601 aa11.07□□□□□ -0.64
PTPRN2-202ENST00000389416 PLPPR1Q8TBJ4 325 aa11.07□□□□□ -0.64
PTPRN2-202ENST00000389416 CXorf58Q96LI9 332 aa11.07□□□□□ -0.64
PTPRN2-202ENST00000389416 TMEM140Q9NV12 185 aa11.07□□□□□ -0.64
PTPRN2-202ENST00000389416 IGKV1-12A0A0C4DH73 117 aa11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 IGKV1D-12P01611 117 aa11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 MBPP02686 304 aaPredicted RBP11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 B2MP61769 119 aa11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 RUNX1Q01196 453 aa11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 LY6EQ16553 131 aa11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 C1QTNF12Q5T7M4 302 aa11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 PHYHIPLQ96FC7 376 aa11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 LURAP1Q96LR2 239 aa11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 GFI1Q99684 422 aa11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 CEP350Q5VT06 3117 aa11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 SCO1O75880 301 aa11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 SNRPCP09234 159 aaKnown RBP11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 UBE2L3P68036 154 aaKnown RBP11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 PNRC2Q9NPJ4 139 aaKnown RBP11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 ZNF331Q9NQX6 463 aaPredicted RBP11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 TNFSF18Q9UNG2 199 aa11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 PPP5D1E7EU14 171 aa11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 SMAD7O15105 426 aaKnown RBP11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 SLC25A5P05141 298 aaKnown RBP11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 H2BFSP57053 126 aa11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 AANATQ16613 207 aa11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 TCTEX1D1Q8N7M0 179 aa11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 FAM168AQ92567 244 aa11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 TP53RKQ96S44 253 aa11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 HIST3H3Q16695 136 aa11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 MMD2Q8IY49 270 aa11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 OR52M1Q8NGK5 317 aa11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 LILRB1Q8NHL6 650 aaPredicted RBP11.06□□□□□ -0.64
PTPRN2-202ENST00000389416 TRBV23-1A0A0A0MS06 115 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms