RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 ZNF708P17019 499 aa4.28□□□□□ -1.72
LTN1-202ENST00000389194 CD1BP29016 333 aa4.28□□□□□ -1.72
LTN1-202ENST00000389194 CEACAM21Q3KPI0 293 aa4.28□□□□□ -1.72
LTN1-202ENST00000389194 ZNF385CQ66K41 422 aaPredicted RBP4.28□□□□□ -1.72
LTN1-202ENST00000389194 ASPHD2Q6ICH7 369 aa4.28□□□□□ -1.72
LTN1-202ENST00000389194 C5orf17Q8NAS9 161 aa4.28□□□□□ -1.72
LTN1-202ENST00000389194 SAP25Q8TEE9 199 aa4.28□□□□□ -1.72
LTN1-202ENST00000389194 FKBP11Q9NYL4 201 aa4.28□□□□□ -1.72
LTN1-202ENST00000389194 PXMP4Q9Y6I8 212 aa4.28□□□□□ -1.72
LTN1-202ENST00000389194 TNCP24821 2201 aa4.28□□□□□ -1.72
LTN1-202ENST00000389194 IGHV3-66A0A0C4DH42 116 aa4.28□□□□□ -1.72
LTN1-202ENST00000389194 LTBRP36941 435 aa4.28□□□□□ -1.72
LTN1-202ENST00000389194 SULT1A2P50226 295 aa4.28□□□□□ -1.72
LTN1-202ENST00000389194 NAAAQ02083 359 aa4.28□□□□□ -1.72
LTN1-202ENST00000389194 UNQ9370/PRO34162Q6UXP9 181 aa4.28□□□□□ -1.72
LTN1-202ENST00000389194 OR8G5Q8NG78 346 aa4.28□□□□□ -1.72
LTN1-202ENST00000389194 HSPB9Q9BQS6 159 aa4.28□□□□□ -1.72
LTN1-202ENST00000389194 PARP11Q9NR21 331 aa4.28□□□□□ -1.72
LTN1-202ENST00000389194 ZNF581Q9P0T4 197 aa4.28□□□□□ -1.72
LTN1-202ENST00000389194 SLC25A10Q9UBX3 287 aaPredicted RBP4.28□□□□□ -1.72
LTN1-202ENST00000389194 WIPI2Q9Y4P8 454 aa4.28□□□□□ -1.72
LTN1-202ENST00000389194 LRRC3CA6NJW4 275 aa4.28□□□□□ -1.72
LTN1-202ENST00000389194 RAB29O14966 203 aa4.28□□□□□ -1.72
LTN1-202ENST00000389194 MOB1BQ7L9L4 216 aa4.28□□□□□ -1.72
LTN1-202ENST00000389194 NPDC1Q9NQX5 325 aaPredicted RBP4.28□□□□□ -1.72
LTN1-202ENST00000389194 DCAF16Q9NXF7 216 aa4.28□□□□□ -1.72
LTN1-202ENST00000389194 CSPG4Q6UVK1 2322 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 SLC25A17O43808 307 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 GAPDHP04406 335 aaKnown RBP4.27□□□□□ -1.73
LTN1-202ENST00000389194 CD55P08174 381 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 FOXG1P55316 489 aaPredicted RBP4.27□□□□□ -1.73
LTN1-202ENST00000389194 FGF12P61328 243 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 PCOLCEQ15113 449 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 PQLC2Q6ZP29 291 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 SELENOHQ8IZQ5 122 aaKnown RBP4.27□□□□□ -1.73
LTN1-202ENST00000389194 GUCD1Q96NT3 240 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 NUDT16L1Q9BRJ7 211 aaKnown RBP4.27□□□□□ -1.73
LTN1-202ENST00000389194 TMEM222Q9H0R3 208 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 SEBOXQ9HB31 216 aaPredicted RBP4.27□□□□□ -1.73
LTN1-202ENST00000389194 PIPOXQ9P0Z9 390 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 RNF7Q9UBF6 113 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 IGKV1D-8A0A087WSZ0 117 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 SNAI2O43623 268 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 SCGB1C2P0DMR2 95 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 BCL2P10415 239 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 CD24P25063 80 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 VAX1Q5SQQ9 334 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 ZNF841Q6ZN19 808 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 STARD4Q96DR4 205 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 IMMP2LQ96T52 175 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 CACFD1Q9UGQ2 172 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 RRHO14718 337 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 ARL14EPLP0DKL9 152 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 SMIM17P0DL12 118 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 GFRA1P56159 465 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 DMRTA1Q5VZB9 504 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 ZNF788Q6ZQV5 615 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 FDCSPQ8NFU4 85 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 OR4A4PQ8NGN8 299 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 KLF14Q8TD94 323 aaPredicted RBP4.27□□□□□ -1.73
LTN1-202ENST00000389194 RAB24Q969Q5 203 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 GPX7Q96SL4 187 aaPredicted RBP4.27□□□□□ -1.73
LTN1-202ENST00000389194 GFI1Q99684 422 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 ATG101Q9BSB4 218 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 TRAV14DV4A0A0A6YYC5 116 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 A0A0U1RQV5 110 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 MGPP08493 103 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 FAM87AP0C7U9 286 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 RPL7P18124 248 aaKnown RBP4.27□□□□□ -1.73
LTN1-202ENST00000389194 HINT1P49773 126 aaPredicted RBP4.27□□□□□ -1.73
LTN1-202ENST00000389194 SURF2Q15527 256 aaPredicted RBP4.27□□□□□ -1.73
LTN1-202ENST00000389194 TMEM183BQ1AE95 376 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 ZNF658BQ4V348 819 aaPredicted RBP4.27□□□□□ -1.73
LTN1-202ENST00000389194 C10orf113Q5VZT2 155 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 TEPPQ6URK8 271 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 DOLPP1Q86YN1 238 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 LTBP1Q14766 1721 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 A0A1W2PN81 502 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 OR4C46A6NHA9 309 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 LINC01387J3KSC0 135 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 SLC17A3O00476 420 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 CCL21O00585 134 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 TCF21O43680 179 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 CDS2O95674 445 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 P01737 135 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 CD3EP07766 207 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 SOD3P08294 240 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 SEC11BP0C7V7 166 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 MRGPRGQ86SM5 289 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 FAM117AQ9C073 453 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 CBLN4Q9NTU7 201 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 IGSF23A1L1A6 192 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 SMPD2O60906 423 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 MOSP00540 346 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 OR4A8P0C604 315 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 CRYBB3P26998 211 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 RAB7AP51149 207 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 ARF6P62330 175 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 RPL24P83731 157 aaKnown RBP4.27□□□□□ -1.73
LTN1-202ENST00000389194 ZP4Q12836 540 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms