RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 MAGOHP61326 146 aaKnown RBP2.47□□□□□ -2.01
RNU6-40P-201ENST00000384254 UAP1Q16222 522 aaPredicted RBP2.47□□□□□ -2.01
RNU6-40P-201ENST00000384254 LRRN1Q6UXK5 716 aa2.47□□□□□ -2.01
RNU6-40P-201ENST00000384254 COMMD7Q86VX2 200 aa2.47□□□□□ -2.01
RNU6-40P-201ENST00000384254 C1orf174Q8IYL3 243 aa2.47□□□□□ -2.01
RNU6-40P-201ENST00000384254 TESCQ96BS2 214 aa2.47□□□□□ -2.01
RNU6-40P-201ENST00000384254 DKKL1Q9UK85 242 aa2.47□□□□□ -2.01
RNU6-40P-201ENST00000384254 TMEM235A6NFC5 223 aa2.46□□□□□ -2.02
RNU6-40P-201ENST00000384254 ODF3BA8MYP8 253 aa2.46□□□□□ -2.02
RNU6-40P-201ENST00000384254 OR11H12B2RN74 326 aa2.46□□□□□ -2.02
RNU6-40P-201ENST00000384254 IGHV1-69P01742 117 aa2.46□□□□□ -2.02
RNU6-40P-201ENST00000384254 HLA-DQB2P05538 268 aa2.46□□□□□ -2.02
RNU6-40P-201ENST00000384254 RPL12P30050 165 aaKnown RBP2.46□□□□□ -2.02
RNU6-40P-201ENST00000384254 GABRA4P48169 554 aa2.46□□□□□ -2.02
RNU6-40P-201ENST00000384254 SERPINB10P48595 397 aa2.46□□□□□ -2.02
RNU6-40P-201ENST00000384254 BATFQ16520 125 aa2.46□□□□□ -2.02
RNU6-40P-201ENST00000384254 HIST2H3AQ71DI3 136 aa2.46□□□□□ -2.02
RNU6-40P-201ENST00000384254 OR11H2Q8NH07 326 aa2.46□□□□□ -2.02
RNU6-40P-201ENST00000384254 EEF1AKMT1Q8WVE0 214 aa2.46□□□□□ -2.02
RNU6-40P-201ENST00000384254 ZCCHC13Q8WW36 166 aaKnown RBP2.46□□□□□ -2.02
RNU6-40P-201ENST00000384254 TMA16Q96EY4 203 aaKnown RBP2.46□□□□□ -2.02
RNU6-40P-201ENST00000384254 SLC35G5Q96KT7 338 aa2.46□□□□□ -2.02
RNU6-40P-201ENST00000384254 MIEN1Q9BRT3 115 aa2.46□□□□□ -2.02
RNU6-40P-201ENST00000384254 BABAM2Q9NXR7 383 aa2.46□□□□□ -2.02
RNU6-40P-201ENST00000384254 CCL26Q9Y258 94 aa2.46□□□□□ -2.02
RNU6-40P-201ENST00000384254 ZNF337Q9Y3M9 751 aa2.46□□□□□ -2.02
RNU6-40P-201ENST00000384254 LTBP2Q14767 1821 aa2.45□□□□□ -2.02
RNU6-40P-201ENST00000384254 CXCR6O00574 342 aa2.45□□□□□ -2.02
RNU6-40P-201ENST00000384254 NDUFB2O95178 105 aa2.45□□□□□ -2.02
RNU6-40P-201ENST00000384254 CRYBB3P26998 211 aa2.45□□□□□ -2.02
RNU6-40P-201ENST00000384254 AP2S1P53680 142 aaPredicted RBP2.45□□□□□ -2.02
RNU6-40P-201ENST00000384254 CDKL4Q5MAI5 379 aa2.45□□□□□ -2.02
RNU6-40P-201ENST00000384254 FAM78BQ5VT40 261 aa2.45□□□□□ -2.02
RNU6-40P-201ENST00000384254 UBL4BQ8N7F7 174 aa2.45□□□□□ -2.02
RNU6-40P-201ENST00000384254 TRPM6Q9BX84 2022 aa2.45□□□□□ -2.02
RNU6-40P-201ENST00000384254 KNCNA6PVL3 124 aa2.44□□□□□ -2.02
RNU6-40P-201ENST00000384254 FNDC10F2Z333 226 aa2.44□□□□□ -2.02
RNU6-40P-201ENST00000384254 HLA-DRAP01903 254 aa2.44□□□□□ -2.02
RNU6-40P-201ENST00000384254 MYL12AP19105 171 aa2.44□□□□□ -2.02
RNU6-40P-201ENST00000384254 CTBP2P56545 445 aa2.44□□□□□ -2.02
RNU6-40P-201ENST00000384254 FOXF1Q12946 379 aa2.44□□□□□ -2.02
RNU6-40P-201ENST00000384254 PLPPR5Q32ZL2 321 aa2.44□□□□□ -2.02
RNU6-40P-201ENST00000384254 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
RNU6-40P-201ENST00000384254 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
RNU6-40P-201ENST00000384254 PTRHD1Q6GMV3 140 aaKnown RBP2.44□□□□□ -2.02
RNU6-40P-201ENST00000384254 KRTAP5-2Q701N4 177 aa2.44□□□□□ -2.02
RNU6-40P-201ENST00000384254 DAND5Q8N907 189 aa2.44□□□□□ -2.02
RNU6-40P-201ENST00000384254 CNEP1R1Q8N9A8 125 aa2.44□□□□□ -2.02
RNU6-40P-201ENST00000384254 RPS4Y2Q8TD47 263 aa2.44□□□□□ -2.02
RNU6-40P-201ENST00000384254 HAVCR2Q8TDQ0 301 aa2.44□□□□□ -2.02
RNU6-40P-201ENST00000384254 RAB8BQ92930 207 aa2.44□□□□□ -2.02
RNU6-40P-201ENST00000384254 MRPS24Q96EL2 167 aaKnown RBP2.44□□□□□ -2.02
RNU6-40P-201ENST00000384254 MRPS26Q9BYN8 205 aaKnown RBP2.44□□□□□ -2.02
RNU6-40P-201ENST00000384254 OR51I2Q9H344 312 aa2.44□□□□□ -2.02
RNU6-40P-201ENST00000384254 C16orf95Q9H693 158 aa2.44□□□□□ -2.02
RNU6-40P-201ENST00000384254 PARVGQ9HBI0 331 aa2.44□□□□□ -2.02
RNU6-40P-201ENST00000384254 C3orf18Q9UK00 162 aa2.44□□□□□ -2.02
RNU6-40P-201ENST00000384254 MYO9BQ13459 2157 aa2.44□□□□□ -2.02
RNU6-40P-201ENST00000384254 TMED7-TICAM2A0A0A6YYA0 188 aa2.43□□□□□ -2.02
RNU6-40P-201ENST00000384254 OR6C6A6NF89 314 aa2.43□□□□□ -2.02
RNU6-40P-201ENST00000384254 OR5K4A6NMS3 321 aa2.43□□□□□ -2.02
RNU6-40P-201ENST00000384254 NIPSNAP2O75323 286 aa2.43□□□□□ -2.02
RNU6-40P-201ENST00000384254 CCL3P10147 92 aa2.43□□□□□ -2.02
RNU6-40P-201ENST00000384254 TAS2R30P59541 319 aa2.43□□□□□ -2.02
RNU6-40P-201ENST00000384254 RSU1Q15404 277 aa2.43□□□□□ -2.02
RNU6-40P-201ENST00000384254 CLVS2Q5SYC1 327 aa2.43□□□□□ -2.02
RNU6-40P-201ENST00000384254 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.43□□□□□ -2.02
RNU6-40P-201ENST00000384254 LPCAT4Q643R3 524 aa2.43□□□□□ -2.02
RNU6-40P-201ENST00000384254 GLT6D1Q7Z4J2 308 aa2.43□□□□□ -2.02
RNU6-40P-201ENST00000384254 MNS1Q8NEH6 495 aa2.43□□□□□ -2.02
RNU6-40P-201ENST00000384254 OR4X1Q8NH49 305 aa2.43□□□□□ -2.02
RNU6-40P-201ENST00000384254 RNF133Q8WVZ7 376 aa2.43□□□□□ -2.02
RNU6-40P-201ENST00000384254 FGF13Q92913 245 aa2.43□□□□□ -2.02
RNU6-40P-201ENST00000384254 DNAJC30Q96LL9 226 aa2.43□□□□□ -2.02
RNU6-40P-201ENST00000384254 TMEM222Q9H0R3 208 aa2.43□□□□□ -2.02
RNU6-40P-201ENST00000384254 NDUFB11Q9NX14 153 aa2.43□□□□□ -2.02
RNU6-40P-201ENST00000384254 ADAMTSL1Q8N6G6 1762 aa2.43□□□□□ -2.02
RNU6-40P-201ENST00000384254 THSD7AQ9UPZ6 1657 aa2.42□□□□□ -2.02
RNU6-40P-201ENST00000384254 A0A1W2PQL4 384 aaPredicted RBP2.42□□□□□ -2.02
RNU6-40P-201ENST00000384254 SMIM23A6NLE4 172 aa2.42□□□□□ -2.02
RNU6-40P-201ENST00000384254 LY6LH3BQJ8 138 aa2.42□□□□□ -2.02
RNU6-40P-201ENST00000384254 TXNDC9O14530 226 aa2.42□□□□□ -2.02
RNU6-40P-201ENST00000384254 ACOX3O15254 700 aa2.42□□□□□ -2.02
RNU6-40P-201ENST00000384254 ISG15P05161 165 aa2.42□□□□□ -2.02
RNU6-40P-201ENST00000384254 RPS12P25398 132 aaKnown RBP2.42□□□□□ -2.02
RNU6-40P-201ENST00000384254 RPL27AP46776 148 aaKnown RBP2.42□□□□□ -2.02
RNU6-40P-201ENST00000384254 GABRA2P47869 451 aa2.42□□□□□ -2.02
RNU6-40P-201ENST00000384254 TBPL1P62380 186 aa2.42□□□□□ -2.02
RNU6-40P-201ENST00000384254 C2orf91Q6ZV80 131 aa2.42□□□□□ -2.02
RNU6-40P-201ENST00000384254 KRTAP13-1Q8IUC0 172 aa2.42□□□□□ -2.02
RNU6-40P-201ENST00000384254 TMEM161BQ8NDZ6 487 aa2.42□□□□□ -2.02
RNU6-40P-201ENST00000384254 PECRQ9BY49 303 aa2.42□□□□□ -2.02
RNU6-40P-201ENST00000384254 C9orf84Q5VXU9 1444 aa2.42□□□□□ -2.02
RNU6-40P-201ENST00000384254 MYO16Q9Y6X6 1858 aa2.41□□□□□ -2.02
RNU6-40P-201ENST00000384254 IGHV3-15A0A0B4J1V0 119 aa2.41□□□□□ -2.02
RNU6-40P-201ENST00000384254 C11orf86A6NJI1 115 aa2.41□□□□□ -2.02
RNU6-40P-201ENST00000384254 C2orf74A8MZ97 194 aa2.41□□□□□ -2.02
RNU6-40P-201ENST00000384254 DISC1C4P0D8 188 aa2.41□□□□□ -2.02
RNU6-40P-201ENST00000384254 UCHL1P09936 223 aa2.41□□□□□ -2.02
RNU6-40P-201ENST00000384254 UCHL3P15374 230 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms