RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 PRELID3BQ9Y3B1 194 aa21.84■■□□□ 1.09
MSX1-201ENST00000382723 ABCA12Q86UK0 2595 aa21.84■■□□□ 1.09
MSX1-201ENST00000382723 S1PR2O95136 353 aa21.84■■□□□ 1.09
MSX1-201ENST00000382723 RPA2P15927 270 aa21.84■■□□□ 1.09
MSX1-201ENST00000382723 DIAPH2-AS1Q14236 149 aa21.84■■□□□ 1.09
MSX1-201ENST00000382723 OR13D1Q8NGV5 346 aa21.84■■□□□ 1.09
MSX1-201ENST00000382723 DUXBA0A1W2PPF3 345 aa21.83■■□□□ 1.09
MSX1-201ENST00000382723 SLC25A16P16260 332 aa21.83■■□□□ 1.09
MSX1-201ENST00000382723 VDAC1P21796 283 aa21.83■■□□□ 1.09
MSX1-201ENST00000382723 PRTN3P24158 256 aa21.83■■□□□ 1.09
MSX1-201ENST00000382723 THBS3P49746 956 aa21.83■■□□□ 1.09
MSX1-201ENST00000382723 AKR1C2P52895 323 aa21.83■■□□□ 1.09
MSX1-201ENST00000382723 KLRD1Q13241 179 aa21.83■■□□□ 1.09
MSX1-201ENST00000382723 VMO1Q7Z5L0 202 aa21.83■■□□□ 1.09
MSX1-201ENST00000382723 TCTEX1D1Q8N7M0 179 aa21.83■■□□□ 1.09
MSX1-201ENST00000382723 ZNF383Q8NA42 475 aa21.83■■□□□ 1.09
MSX1-201ENST00000382723 GRPEL2Q8TAA5 225 aa21.83■■□□□ 1.09
MSX1-201ENST00000382723 KPTNQ9Y664 436 aa21.83■■□□□ 1.09
MSX1-201ENST00000382723 CT45A6P0DMU7 189 aa21.82■■□□□ 1.08
MSX1-201ENST00000382723 CT45A5P0DMU8 189 aa21.82■■□□□ 1.08
MSX1-201ENST00000382723 CT45A7P0DMV0 189 aa21.82■■□□□ 1.08
MSX1-201ENST00000382723 HLA-DRB5Q30154 266 aa21.82■■□□□ 1.08
MSX1-201ENST00000382723 PDZD9Q8IXQ8 264 aa21.82■■□□□ 1.08
MSX1-201ENST00000382723 TNFRSF14Q92956 283 aa21.82■■□□□ 1.08
MSX1-201ENST00000382723 RBMXL1Q96E39 390 aaKnown RBP21.82■■□□□ 1.08
MSX1-201ENST00000382723 HYLS1Q96M11 299 aa21.82■■□□□ 1.08
MSX1-201ENST00000382723 A0A0G2JRQ6 117 aa21.82■■□□□ 1.08
MSX1-201ENST00000382723 IGLV1-47P01700 117 aa21.82■■□□□ 1.08
MSX1-201ENST00000382723 EPHA1P21709 976 aa21.82■■□□□ 1.08
MSX1-201ENST00000382723 USF1P22415 310 aaPredicted RBP21.82■■□□□ 1.08
MSX1-201ENST00000382723 C1orf122Q6ZSJ8 110 aa21.82■■□□□ 1.08
MSX1-201ENST00000382723 LRRC75A-AS1Q8N1F1 130 aa21.82■■□□□ 1.08
MSX1-201ENST00000382723 ZBTB8BQ8NAP8 495 aaPredicted RBP21.82■■□□□ 1.08
MSX1-201ENST00000382723 CD300LFQ8TDQ1 290 aa21.82■■□□□ 1.08
MSX1-201ENST00000382723 DDB2Q92466 427 aa21.82■■□□□ 1.08
MSX1-201ENST00000382723 TMEM186Q96B77 213 aa21.82■■□□□ 1.08
MSX1-201ENST00000382723 MRPL20Q9BYC9 149 aaKnown RBP21.82■■□□□ 1.08
MSX1-201ENST00000382723 TRAV14DV4A0A0A6YYC5 116 aa21.81■■□□□ 1.08
MSX1-201ENST00000382723 KRASP01116 189 aa21.81■■□□□ 1.08
MSX1-201ENST00000382723 IGKV1-5P01602 117 aa21.81■■□□□ 1.08
MSX1-201ENST00000382723 IL3RAP26951 378 aa21.81■■□□□ 1.08
MSX1-201ENST00000382723 IZUMO4Q1ZYL8 232 aa21.81■■□□□ 1.08
MSX1-201ENST00000382723 NMSQ5H8A3 153 aa21.81■■□□□ 1.08
MSX1-201ENST00000382723 ADTRPQ96IZ2 230 aa21.81■■□□□ 1.08
MSX1-201ENST00000382723 PCGF1Q9BSM1 259 aa21.81■■□□□ 1.08
MSX1-201ENST00000382723 ANKRD17O75179 2603 aaKnown RBP21.81■■□□□ 1.08
MSX1-201ENST00000382723 PIGBOS1A0A0B4J2F0 54 aa21.8■■□□□ 1.08
MSX1-201ENST00000382723 DVL1P1P54792 670 aaPredicted RBP21.8■■□□□ 1.08
MSX1-201ENST00000382723 BEND2Q8NDZ0 799 aa21.8■■□□□ 1.08
MSX1-201ENST00000382723 ST6GALNAC6Q969X2 333 aa21.8■■□□□ 1.08
MSX1-201ENST00000382723 RRNAD1Q96FB5 475 aaKnown RBP21.8■■□□□ 1.08
MSX1-201ENST00000382723 SIRPDQ9H106 197 aa21.8■■□□□ 1.08
MSX1-201ENST00000382723 HEXA-AS1Q9H8Q6 139 aa21.8■■□□□ 1.08
MSX1-201ENST00000382723 FAM212BQ9NTI7 297 aaPredicted RBP21.8■■□□□ 1.08
MSX1-201ENST00000382723 SCGB1D2O95969 90 aa21.8■■□□□ 1.08
MSX1-201ENST00000382723 ARG1P05089 322 aa21.8■■□□□ 1.08
MSX1-201ENST00000382723 G6PCP35575 357 aa21.8■■□□□ 1.08
MSX1-201ENST00000382723 FGL1Q08830 312 aa21.8■■□□□ 1.08
MSX1-201ENST00000382723 Q5PR19 223 aa21.8■■□□□ 1.08
MSX1-201ENST00000382723 GPR146Q96CH1 333 aa21.8■■□□□ 1.08
MSX1-201ENST00000382723 POLR3KQ9Y2Y1 108 aaPredicted RBP21.8■■□□□ 1.08
MSX1-201ENST00000382723 APCP25054 2843 aa21.79■■□□□ 1.08
MSX1-201ENST00000382723 FXYD6-FXYD2A0A087WZ82 144 aa21.79■■□□□ 1.08
MSX1-201ENST00000382723 BUB1B-PAK6H3BSN5 160 aa21.79■■□□□ 1.08
MSX1-201ENST00000382723 TOX4O94842 621 aa21.79■■□□□ 1.08
MSX1-201ENST00000382723 PSMB6P28072 239 aa21.79■■□□□ 1.08
MSX1-201ENST00000382723 KIR2DS2P43631 304 aa21.79■■□□□ 1.08
MSX1-201ENST00000382723 S100A10P60903 97 aa21.79■■□□□ 1.08
MSX1-201ENST00000382723 FOXRED2Q8IWF2 684 aa21.79■■□□□ 1.08
MSX1-201ENST00000382723 OR4P4Q8NGL7 312 aa21.79■■□□□ 1.08
MSX1-201ENST00000382723 A0A1W2PRD5 423 aa21.78■■□□□ 1.08
MSX1-201ENST00000382723 A0A1W2PRF3 423 aa21.78■■□□□ 1.08
MSX1-201ENST00000382723 A0A1W2PRM7 423 aa21.78■■□□□ 1.08
MSX1-201ENST00000382723 MPC2O95563 127 aa21.78■■□□□ 1.08
MSX1-201ENST00000382723 ZNF137PP52743 207 aa21.78■■□□□ 1.08
MSX1-201ENST00000382723 IL15RAQ13261 267 aa21.78■■□□□ 1.08
MSX1-201ENST00000382723 RAB32Q13637 225 aa21.78■■□□□ 1.08
MSX1-201ENST00000382723 THOC7Q6I9Y2 204 aaKnown RBP21.78■■□□□ 1.08
MSX1-201ENST00000382723 HCP5Q6MZN7 132 aa21.78■■□□□ 1.08
MSX1-201ENST00000382723 TGIF2LXQ8IUE1 241 aa21.78■■□□□ 1.08
MSX1-201ENST00000382723 OR11H6Q8NGC7 330 aa21.78■■□□□ 1.08
MSX1-201ENST00000382723 LSM10Q969L4 123 aaKnown RBP21.78■■□□□ 1.08
MSX1-201ENST00000382723 MBD6Q96DN6 1003 aa21.78■■□□□ 1.08
MSX1-201ENST00000382723 SPIN2AQ99865 258 aa21.78■■□□□ 1.08
MSX1-201ENST00000382723 SPIN2BQ9BPZ2 258 aa21.78■■□□□ 1.08
MSX1-201ENST00000382723 CRYZL1O95825 349 aa21.77■■□□□ 1.08
MSX1-201ENST00000382723 HPRT1P00492 218 aa21.77■■□□□ 1.08
MSX1-201ENST00000382723 MMP9P14780 707 aa21.77■■□□□ 1.08
MSX1-201ENST00000382723 FAM71F2Q6NXP2 309 aa21.77■■□□□ 1.08
MSX1-201ENST00000382723 OR4S2Q8NH73 311 aa21.77■■□□□ 1.08
MSX1-201ENST00000382723 AMMECR1Q9Y4X0 333 aaPredicted RBP21.77■■□□□ 1.08
MSX1-201ENST00000382723 RBFOX2O43251 390 aaKnown RBP eCLIP21.76■■□□□ 1.07
MSX1-201ENST00000382723 HOXB4P17483 251 aaPredicted RBP21.76■■□□□ 1.07
MSX1-201ENST00000382723 C11orf87Q6NUJ2 197 aa21.76■■□□□ 1.07
MSX1-201ENST00000382723 R3HDM4Q96D70 268 aa21.76■■□□□ 1.07
MSX1-201ENST00000382723 UNKLQ9H9P5 680 aaKnown RBP21.76■■□□□ 1.07
MSX1-201ENST00000382723 PLEKHA2Q9HB19 425 aa21.76■■□□□ 1.07
MSX1-201ENST00000382723 SLC35D1Q9NTN3 355 aa21.76■■□□□ 1.07
MSX1-201ENST00000382723 INSIG2Q9Y5U4 225 aa21.76■■□□□ 1.07
MSX1-201ENST00000382723 RNASEK-C17orf49H0YIS7 233 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms