RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 TMEM189A5PLL7 270 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 TNFRSF13BO14836 293 aaPredicted RBP7.97□□□□□ -1.13
PTPRA-204ENST00000380393 SOCS1O15524 211 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 MPIG6BO95866 241 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 SPINK8P0C7L1 97 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 IGFBP3P17936 291 aaPredicted RBP7.97□□□□□ -1.13
PTPRA-204ENST00000380393 HTR1DP28221 377 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 SEC11AP67812 179 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 FHL1Q13642 323 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 ABCA11PQ4W5N1 156 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 SPATA12Q7Z6I5 190 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 RAB42Q8N4Z0 105 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 STPG3Q8N7X2 389 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 SCCPDHQ8NBX0 429 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 VSTM2AQ8TAG5 236 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 SSC4DQ8WTU2 575 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 RNF133Q8WVZ7 376 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 RERGQ96A58 199 aaPredicted RBP7.97□□□□□ -1.13
PTPRA-204ENST00000380393 RAX2Q96IS3 184 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 MS4A5Q9H3V2 200 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 NECAP2Q9NVZ3 263 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 CLCF1Q9UBD9 225 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 HMGB3O15347 200 aaKnown RBP7.97□□□□□ -1.13
PTPRA-204ENST00000380393 DBIP07108 87 aaKnown RBP7.97□□□□□ -1.13
PTPRA-204ENST00000380393 CPMP14384 443 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 HIST1H1DP16402 221 aaKnown RBP7.97□□□□□ -1.13
PTPRA-204ENST00000380393 GPR183P32249 361 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 ACKR1Q16570 336 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 MEP1BQ16820 701 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 ACSF3Q4G176 576 aaPredicted RBP7.97□□□□□ -1.13
PTPRA-204ENST00000380393 KCNG3Q8TAE7 436 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 SCGB1C1Q8TD33 95 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 RAB37Q96AX2 223 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 COMMD5Q9GZQ3 224 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 WDR76Q9H967 626 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 PRDM6Q9NQX0 595 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 SLC39A9Q9NUM3 307 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 ERRFI1Q9UJM3 462 aaPredicted RBP7.97□□□□□ -1.13
PTPRA-204ENST00000380393 SAA2-SAA4A0A096LPE2 208 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 HELTA6NFD8 242 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 RAD51DO75771 328 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 TFF2Q03403 129 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 TMEM187Q14656 261 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 C1orf140Q5VVS0 124 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 S1PR5Q9H228 398 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 CRIM1Q9NZV1 1036 aa7.97□□□□□ -1.13
PTPRA-204ENST00000380393 TTC28Q96AY4 2481 aa7.96□□□□□ -1.13
PTPRA-204ENST00000380393 hDV102S1A0JD36 115 aa7.96□□□□□ -1.13
PTPRA-204ENST00000380393 H3BRM9 83 aa7.96□□□□□ -1.13
PTPRA-204ENST00000380393 PRKNO60260 465 aaPredicted RBP7.96□□□□□ -1.13
PTPRA-204ENST00000380393 CGAP01215 116 aa7.96□□□□□ -1.13
PTPRA-204ENST00000380393 TNFP01375 233 aa7.96□□□□□ -1.13
PTPRA-204ENST00000380393 HIST1H1EP10412 219 aaKnown RBP7.96□□□□□ -1.13
PTPRA-204ENST00000380393 MDH2P40926 338 aaKnown RBP7.96□□□□□ -1.13
PTPRA-204ENST00000380393 UBE2G1P62253 170 aa7.96□□□□□ -1.13
PTPRA-204ENST00000380393 PLAC9Q5JTB6 97 aa7.96□□□□□ -1.13
PTPRA-204ENST00000380393 NAT8BQ9UHF3 227 aa7.96□□□□□ -1.13
PTPRA-204ENST00000380393 LOC102725191A0A1B0GVB3 256 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 OR4C46A6NHA9 309 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 PRR33A8MZF0 331 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 PRDX1Q06830 199 aaKnown RBP7.96□□□□□ -1.14
PTPRA-204ENST00000380393 LMX1AQ8TE12 382 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 TSKUQ8WUA8 353 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 NAA60Q9H7X0 242 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 FAM60AQ9NP50 221 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 FBLN5Q9UBX5 448 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 ANAPC10Q9UM13 185 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 ZNF835Q9Y2P0 537 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 TMEM14AQ9Y6G1 99 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 NCOR1O75376 2440 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 ASCC3Q8N3C0 2202 aaKnown RBP7.96□□□□□ -1.14
PTPRA-204ENST00000380393 IGKV1-8A0A0C4DH67 115 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 A6NDN8 102 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 EMDP50402 254 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 CTXN1P60606 82 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 PRICKLE4Q2TBC4 344 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 GAB4Q2WGN9 574 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 OR10J3Q5JRS4 329 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 DCAF12Q5T6F0 453 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 LIAT1Q6ZQX7 453 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 Q6ZSR6 202 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 NEIL1Q96FI4 390 aaPredicted RBP7.96□□□□□ -1.14
PTPRA-204ENST00000380393 ARHGAP5-AS1Q96IT6 56 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 C1QTNF4Q9BXJ3 329 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 B9D1Q9UPM9 204 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 OR1A2Q9Y585 309 aa7.96□□□□□ -1.14
PTPRA-204ENST00000380393 COL4A3Q01955 1670 aa7.95□□□□□ -1.14
PTPRA-204ENST00000380393 SLC22A20A6NK97 555 aa7.95□□□□□ -1.14
PTPRA-204ENST00000380393 SRD5A2P31213 254 aa7.95□□□□□ -1.14
PTPRA-204ENST00000380393 GNG3P63215 75 aa7.95□□□□□ -1.14
PTPRA-204ENST00000380393 PHLDA2Q53GA4 152 aa7.95□□□□□ -1.14
PTPRA-204ENST00000380393 FOXI2Q6ZQN5 318 aa7.95□□□□□ -1.14
PTPRA-204ENST00000380393 C8orf86Q6ZUL3 223 aa7.95□□□□□ -1.14
PTPRA-204ENST00000380393 YRDCQ86U90 279 aaKnown RBP7.95□□□□□ -1.14
PTPRA-204ENST00000380393 ZNF501Q96CX3 271 aaPredicted RBP7.95□□□□□ -1.14
PTPRA-204ENST00000380393 BANF2Q9H503 90 aa7.95□□□□□ -1.14
PTPRA-204ENST00000380393 KBTBD11-OT1A0A1B0GTJ5 212 aa7.95□□□□□ -1.14
PTPRA-204ENST00000380393 A0A1W2PPV9 198 aa7.95□□□□□ -1.14
PTPRA-204ENST00000380393 HRKO00198 91 aa7.95□□□□□ -1.14
PTPRA-204ENST00000380393 MLNRO43193 412 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms