RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.24□□□□□ -0.13
THUMPD2-201ENST00000378727 DDB2Q92466 427 aa14.24□□□□□ -0.13
THUMPD2-201ENST00000378727 FBXL17Q9UF56 701 aa14.24□□□□□ -0.13
THUMPD2-201ENST00000378727 CHST1O43916 411 aa14.23□□□□□ -0.13
THUMPD2-201ENST00000378727 GPR137BO60478 399 aa14.23□□□□□ -0.13
THUMPD2-201ENST00000378727 FCGR3BO75015 233 aa14.23□□□□□ -0.13
THUMPD2-201ENST00000378727 CDKN1AP38936 164 aa14.23□□□□□ -0.13
THUMPD2-201ENST00000378727 GPR157Q5UAW9 335 aa14.23□□□□□ -0.13
THUMPD2-201ENST00000378727 ZNF295-AS1Q8N0V1 137 aa14.23□□□□□ -0.13
THUMPD2-201ENST00000378727 FLNCQ14315 2725 aa14.23□□□□□ -0.13
THUMPD2-201ENST00000378727 MALRD1Q5VYJ5 2156 aa14.23□□□□□ -0.13
THUMPD2-201ENST00000378727 FAM24AA6NFZ4 105 aa14.22□□□□□ -0.13
THUMPD2-201ENST00000378727 TAAR5O14804 337 aa14.22□□□□□ -0.13
THUMPD2-201ENST00000378727 PAX9P55771 341 aa14.22□□□□□ -0.13
THUMPD2-201ENST00000378727 RPL7L1Q6DKI1 246 aaKnown RBP14.22□□□□□ -0.13
THUMPD2-201ENST00000378727 OR2C3Q8N628 320 aa14.22□□□□□ -0.13
THUMPD2-201ENST00000378727 CD300LFQ8TDQ1 290 aa14.22□□□□□ -0.13
THUMPD2-201ENST00000378727 PHYHIPLQ96FC7 376 aa14.22□□□□□ -0.13
THUMPD2-201ENST00000378727 SMIM3Q9BZL3 60 aa14.22□□□□□ -0.13
THUMPD2-201ENST00000378727 COA4Q9NYJ1 87 aa14.22□□□□□ -0.13
THUMPD2-201ENST00000378727 EPG5Q9HCE0 2579 aa14.22□□□□□ -0.13
THUMPD2-201ENST00000378727 DOPEY1Q5JWR5 2465 aa14.22□□□□□ -0.13
THUMPD2-201ENST00000378727 LINC00862A6NCI5 91 aa14.22□□□□□ -0.13
THUMPD2-201ENST00000378727 C1QL1O75973 258 aa14.22□□□□□ -0.13
THUMPD2-201ENST00000378727 NMBP08949 121 aa14.22□□□□□ -0.13
THUMPD2-201ENST00000378727 TPT1P13693 172 aaKnown RBP14.22□□□□□ -0.13
THUMPD2-201ENST00000378727 PVALBP20472 110 aaPredicted RBP14.22□□□□□ -0.13
THUMPD2-201ENST00000378727 RAB14P61106 215 aa14.22□□□□□ -0.13
THUMPD2-201ENST00000378727 NHLH2Q02577 135 aa14.22□□□□□ -0.13
THUMPD2-201ENST00000378727 MIDNQ504T8 468 aa14.22□□□□□ -0.13
THUMPD2-201ENST00000378727 FAM74A1Q5RGS3 127 aa14.22□□□□□ -0.13
THUMPD2-201ENST00000378727 BAP18Q8IXM2 172 aa14.22□□□□□ -0.13
THUMPD2-201ENST00000378727 C11orf42Q8N5U0 333 aa14.22□□□□□ -0.13
THUMPD2-201ENST00000378727 LYRM2Q9NU23 88 aaPredicted RBP14.22□□□□□ -0.13
THUMPD2-201ENST00000378727 USP9XQ93008 2570 aaPredicted RBP14.21□□□□□ -0.13
THUMPD2-201ENST00000378727 TRBV23-1A0A0A0MS06 115 aa14.21□□□□□ -0.13
THUMPD2-201ENST00000378727 IGSF23A1L1A6 192 aa14.21□□□□□ -0.13
THUMPD2-201ENST00000378727 PPIHO43447 177 aaKnown RBP14.21□□□□□ -0.13
THUMPD2-201ENST00000378727 NDUFS7O75251 213 aa14.21□□□□□ -0.13
THUMPD2-201ENST00000378727 MMP9P14780 707 aa14.21□□□□□ -0.13
THUMPD2-201ENST00000378727 MARCH11A6NNE9 402 aa14.21□□□□□ -0.14
THUMPD2-201ENST00000378727 WRBO00258 174 aa14.21□□□□□ -0.14
THUMPD2-201ENST00000378727 RBFOX2O43251 390 aaKnown RBP eCLIP14.21□□□□□ -0.14
THUMPD2-201ENST00000378727 CAV2P51636 162 aa14.21□□□□□ -0.14
THUMPD2-201ENST00000378727 EWSR1Q01844 656 aaKnown RBP eCLIP14.21□□□□□ -0.14
THUMPD2-201ENST00000378727 ZNF383Q8NA42 475 aa14.21□□□□□ -0.14
THUMPD2-201ENST00000378727 RAB1CQ92928 201 aa14.21□□□□□ -0.14
THUMPD2-201ENST00000378727 CHODLQ9H9P2 273 aa14.21□□□□□ -0.14
THUMPD2-201ENST00000378727 WFDC1Q9HC57 220 aa14.21□□□□□ -0.14
THUMPD2-201ENST00000378727 ATG12O94817 140 aa14.2□□□□□ -0.14
THUMPD2-201ENST00000378727 HPRT1P00492 218 aa14.2□□□□□ -0.14
THUMPD2-201ENST00000378727 VAMP2P63027 116 aa14.2□□□□□ -0.14
THUMPD2-201ENST00000378727 TMEM252Q8N6L7 170 aa14.2□□□□□ -0.14
THUMPD2-201ENST00000378727 R3HDM4Q96D70 268 aa14.2□□□□□ -0.14
THUMPD2-201ENST00000378727 TIMD4Q96H15 378 aa14.2□□□□□ -0.14
THUMPD2-201ENST00000378727 S1PR3Q99500 378 aa14.2□□□□□ -0.14
THUMPD2-201ENST00000378727 PRELID3BQ9Y3B1 194 aa14.2□□□□□ -0.14
THUMPD2-201ENST00000378727 SPTAN1Q13813 2472 aaKnown RBP14.2□□□□□ -0.14
THUMPD2-201ENST00000378727 TOR1AO14656 332 aa14.19□□□□□ -0.14
THUMPD2-201ENST00000378727 MIOXQ9UGB7 285 aa14.19□□□□□ -0.14
THUMPD2-201ENST00000378727 AUP1Q9Y679 476 aa14.19□□□□□ -0.14
THUMPD2-201ENST00000378727 ZNF462Q96JM2 2506 aa14.19□□□□□ -0.14
THUMPD2-201ENST00000378727 A0A087X0M5 115 aa14.19□□□□□ -0.14
THUMPD2-201ENST00000378727 A0A1B0GX30 115 aa14.19□□□□□ -0.14
THUMPD2-201ENST00000378727 SYNGR2O43760 224 aa14.19□□□□□ -0.14
THUMPD2-201ENST00000378727 GAPDHP04406 335 aaKnown RBP14.19□□□□□ -0.14
THUMPD2-201ENST00000378727 IGHV1-8P0DP01 117 aa14.19□□□□□ -0.14
THUMPD2-201ENST00000378727 THBS3P49746 956 aa14.19□□□□□ -0.14
THUMPD2-201ENST00000378727 WDR25Q64LD2 544 aaPredicted RBP14.19□□□□□ -0.14
THUMPD2-201ENST00000378727 H2BFWTQ7Z2G1 175 aa14.19□□□□□ -0.14
THUMPD2-201ENST00000378727 OR8B3Q8NGG8 313 aa14.19□□□□□ -0.14
THUMPD2-201ENST00000378727 RBMXL1Q96E39 390 aaKnown RBP14.19□□□□□ -0.14
THUMPD2-201ENST00000378727 NEIL1Q96FI4 390 aaPredicted RBP14.19□□□□□ -0.14
THUMPD2-201ENST00000378727 OR8B2Q96RD0 313 aa14.19□□□□□ -0.14
THUMPD2-201ENST00000378727 RAB40CQ96S21 281 aa14.19□□□□□ -0.14
THUMPD2-201ENST00000378727 COL12A1Q99715 3063 aa14.18□□□□□ -0.14
THUMPD2-201ENST00000378727 GPR37O15354 613 aa14.18□□□□□ -0.14
THUMPD2-201ENST00000378727 CT45A6P0DMU7 189 aa14.18□□□□□ -0.14
THUMPD2-201ENST00000378727 CT45A5P0DMU8 189 aa14.18□□□□□ -0.14
THUMPD2-201ENST00000378727 CT45A7P0DMV0 189 aa14.18□□□□□ -0.14
THUMPD2-201ENST00000378727 KIR2DS2P43631 304 aa14.18□□□□□ -0.14
THUMPD2-201ENST00000378727 ZNF833PQ6ZTB9 187 aa14.18□□□□□ -0.14
THUMPD2-201ENST00000378727 ZNF596Q8TC21 504 aa14.18□□□□□ -0.14
THUMPD2-201ENST00000378727 CXorf58Q96LI9 332 aa14.18□□□□□ -0.14
THUMPD2-201ENST00000378727 LEUTXA8MZ59 168 aa14.18□□□□□ -0.14
THUMPD2-201ENST00000378727 FAM90A26D6RGX4 464 aa14.18□□□□□ -0.14
THUMPD2-201ENST00000378727 F12P00748 615 aaPredicted RBP14.18□□□□□ -0.14
THUMPD2-201ENST00000378727 TNFRSF9Q07011 255 aa14.18□□□□□ -0.14
THUMPD2-201ENST00000378727 C8orf31Q8N9H6 132 aa14.18□□□□□ -0.14
THUMPD2-201ENST00000378727 C8orf46Q8TAG6 207 aa14.18□□□□□ -0.14
THUMPD2-201ENST00000378727 TMED6Q8WW62 240 aa14.18□□□□□ -0.14
THUMPD2-201ENST00000378727 RAB39BQ96DA2 213 aa14.18□□□□□ -0.14
THUMPD2-201ENST00000378727 ADTRPQ96IZ2 230 aa14.18□□□□□ -0.14
THUMPD2-201ENST00000378727 SLC25A32Q9H2D1 315 aa14.18□□□□□ -0.14
THUMPD2-201ENST00000378727 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.18□□□□□ -0.14
THUMPD2-201ENST00000378727 HSPB7Q9UBY9 170 aa14.18□□□□□ -0.14
THUMPD2-201ENST00000378727 J3QR06 171 aa14.17□□□□□ -0.14
THUMPD2-201ENST00000378727 JTBO76095 146 aa14.17□□□□□ -0.14
THUMPD2-201ENST00000378727 OR9G9P0C7N8 305 aa14.17□□□□□ -0.14
THUMPD2-201ENST00000378727 IAPPP10997 89 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms