RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 TMEM50BP56557 158 aa12.98□□□□□ -0.33
EXT1-201ENST00000378204 RPL31P62899 125 aaKnown RBP12.98□□□□□ -0.33
EXT1-201ENST00000378204 ZNF441Q8N8Z8 693 aa12.98□□□□□ -0.33
EXT1-201ENST00000378204 FSCN3Q9NQT6 498 aa12.98□□□□□ -0.33
EXT1-201ENST00000378204 ABCA4P78363 2273 aa12.98□□□□□ -0.33
EXT1-201ENST00000378204 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.98□□□□□ -0.331e-6■■■■■ 27
EXT1-201ENST00000378204 IGKV3-7A0A075B6H7 116 aa12.98□□□□□ -0.33
EXT1-201ENST00000378204 A0A0U1RQV5 110 aa12.98□□□□□ -0.33
EXT1-201ENST00000378204 MGAT2Q10469 447 aa12.98□□□□□ -0.33
EXT1-201ENST00000378204 C8orf82Q6P1X6 216 aaPredicted RBP12.98□□□□□ -0.33
EXT1-201ENST00000378204 RGP1Q92546 391 aaPredicted RBP12.98□□□□□ -0.33
EXT1-201ENST00000378204 C16orf97H3BN30 126 aa12.98□□□□□ -0.33
EXT1-201ENST00000378204 RPL36A-HNRNPH2H7BZ11 118 aa12.98□□□□□ -0.33
EXT1-201ENST00000378204 SRSF5Q13243 272 aaKnown RBP12.98□□□□□ -0.33
EXT1-201ENST00000378204 MRPL24Q96A35 216 aaKnown RBP12.97□□□□□ -0.33
EXT1-201ENST00000378204 TMEM249Q2WGJ8 235 aa12.97□□□□□ -0.33
EXT1-201ENST00000378204 TNFRSF19Q9NS68 423 aa12.97□□□□□ -0.33
EXT1-201ENST00000378204 BGLAPP02818 100 aa12.97□□□□□ -0.33
EXT1-201ENST00000378204 GAPDHP04406 335 aaKnown RBP12.97□□□□□ -0.33
EXT1-201ENST00000378204 KCNMB1Q16558 191 aa12.97□□□□□ -0.33
EXT1-201ENST00000378204 NHLRC3Q5JS37 347 aa12.97□□□□□ -0.33
EXT1-201ENST00000378204 PAGE4O60829 102 aa12.97□□□□□ -0.33
EXT1-201ENST00000378204 CD74P04233 296 aa12.97□□□□□ -0.33
EXT1-201ENST00000378204 PCGF1Q9BSM1 259 aa12.97□□□□□ -0.33
EXT1-201ENST00000378204 MYLKQ15746 1914 aa12.97□□□□□ -0.33
EXT1-201ENST00000378204 VSIG8P0DPA2 414 aa12.97□□□□□ -0.33
EXT1-201ENST00000378204 MMP9P14780 707 aa12.97□□□□□ -0.33
EXT1-201ENST00000378204 DYNLRB2Q8TF09 96 aa12.97□□□□□ -0.33
EXT1-201ENST00000378204 MRPL18Q9H0U6 180 aaKnown RBP12.97□□□□□ -0.33
EXT1-201ENST00000378204 GLIPR1P48060 266 aa12.96□□□□□ -0.33
EXT1-201ENST00000378204 SERF2P84101 59 aa12.96□□□□□ -0.33
EXT1-201ENST00000378204 FAM222BQ8WU58 562 aa12.96□□□□□ -0.33
EXT1-201ENST00000378204 LRRK1Q38SD2 2015 aa12.96□□□□□ -0.33
EXT1-201ENST00000378204 TRAV8-2A0A0B4J237 113 aa12.96□□□□□ -0.33
EXT1-201ENST00000378204 PITX3O75364 302 aa12.96□□□□□ -0.33
EXT1-201ENST00000378204 HOXA5P20719 270 aa12.96□□□□□ -0.33
EXT1-201ENST00000378204 AGFG2O95081 481 aa12.96□□□□□ -0.33
EXT1-201ENST00000378204 DNAL4O96015 105 aa12.96□□□□□ -0.33
EXT1-201ENST00000378204 C9orf40Q8IXQ3 194 aa12.96□□□□□ -0.33
EXT1-201ENST00000378204 OR10AG1Q8NH19 301 aa12.96□□□□□ -0.33
EXT1-201ENST00000378204 KIR2DL1P43626 348 aaPredicted RBP12.96□□□□□ -0.33
EXT1-201ENST00000378204 HOGA1Q86XE5 327 aa12.96□□□□□ -0.33
EXT1-201ENST00000378204 ZNF502Q8TBZ5 544 aa12.96□□□□□ -0.33
EXT1-201ENST00000378204 DNASE2BQ8WZ79 361 aa12.96□□□□□ -0.33
EXT1-201ENST00000378204 MRPS18AQ9NVS2 196 aaKnown RBP12.96□□□□□ -0.33
EXT1-201ENST00000378204 SLC25A10Q9UBX3 287 aaPredicted RBP12.96□□□□□ -0.33
EXT1-201ENST00000378204 C5orf67F2Z3F1 127 aa12.96□□□□□ -0.34
EXT1-201ENST00000378204 PSG2P11465 335 aa12.96□□□□□ -0.34
EXT1-201ENST00000378204 P2RX4Q99571 388 aa12.96□□□□□ -0.34
EXT1-201ENST00000378204 CHODLQ9H9P2 273 aa12.96□□□□□ -0.34
EXT1-201ENST00000378204 SCN5AQ14524 2016 aa12.96□□□□□ -0.34
EXT1-201ENST00000378204 PARP14Q460N5 1801 aa12.96□□□□□ -0.34
EXT1-201ENST00000378204 STRCP1A6NGW2 1772 aa12.96□□□□□ -0.34
EXT1-201ENST00000378204 CXCL2P19875 107 aa12.96□□□□□ -0.34
EXT1-201ENST00000378204 ZNF660Q6AZW8 331 aaPredicted RBP12.96□□□□□ -0.34
EXT1-201ENST00000378204 ZAR1Q86SH2 424 aa12.96□□□□□ -0.34
EXT1-201ENST00000378204 TXNDC17Q9BRA2 123 aa12.96□□□□□ -0.34
EXT1-201ENST00000378204 IRF3Q14653 427 aa12.95□□□□□ -0.34
EXT1-201ENST00000378204 LRRC75AQ8NAA5 344 aa12.95□□□□□ -0.34
EXT1-201ENST00000378204 OR8G5Q8NG78 346 aa12.95□□□□□ -0.34
EXT1-201ENST00000378204 K7N7A8 449 aa12.95□□□□□ -0.34
EXT1-201ENST00000378204 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.95□□□□□ -0.34
EXT1-201ENST00000378204 CHD3Q12873 2000 aaKnown RBP12.95□□□□□ -0.34
EXT1-201ENST00000378204 MFAP2P55001 183 aa12.95□□□□□ -0.34
EXT1-201ENST00000378204 GGTLC2Q14390 218 aa12.95□□□□□ -0.34
EXT1-201ENST00000378204 NPVFQ9HCQ7 196 aa12.95□□□□□ -0.34
EXT1-201ENST00000378204 COX11Q9Y6N1 276 aa12.95□□□□□ -0.34
EXT1-201ENST00000378204 PLA2G10O15496 165 aa12.95□□□□□ -0.34
EXT1-201ENST00000378204 NRTNQ99748 197 aa12.95□□□□□ -0.34
EXT1-201ENST00000378204 OR51B2Q9Y5P1 312 aa12.95□□□□□ -0.34
EXT1-201ENST00000378204 MDP1Q86V88 176 aa12.95□□□□□ -0.34
EXT1-201ENST00000378204 SMRP1Q8NCR6 262 aa12.95□□□□□ -0.34
EXT1-201ENST00000378204 OR1K1Q8NGR3 316 aa12.94□□□□□ -0.34
EXT1-201ENST00000378204 ZNF646O15015 1829 aaPredicted RBP12.94□□□□□ -0.34
EXT1-201ENST00000378204 MGPP08493 103 aa12.94□□□□□ -0.34
EXT1-201ENST00000378204 MMDQ15546 238 aa12.94□□□□□ -0.34
EXT1-201ENST00000378204 DCAF10Q5QP82 559 aa12.94□□□□□ -0.34
EXT1-201ENST00000378204 TMEM91Q6ZNR0 172 aa12.94□□□□□ -0.34
EXT1-201ENST00000378204 GBGT1Q8N5D6 347 aa12.94□□□□□ -0.34
EXT1-201ENST00000378204 APELAP0DMC3 54 aa12.94□□□□□ -0.34
EXT1-201ENST00000378204 SPINK2P20155 84 aa12.94□□□□□ -0.34
EXT1-201ENST00000378204 RNFT1Q5M7Z0 435 aa12.94□□□□□ -0.34
EXT1-201ENST00000378204 SPANXN1Q5VSR9 72 aa12.94□□□□□ -0.34
EXT1-201ENST00000378204 FAM27BQ5VT28 67 aa12.94□□□□□ -0.34
EXT1-201ENST00000378204 PSME4Q14997 1843 aa12.94□□□□□ -0.34
EXT1-201ENST00000378204 SPINT1O43278 529 aa12.94□□□□□ -0.34
EXT1-201ENST00000378204 IL9P15248 144 aa12.94□□□□□ -0.34
EXT1-201ENST00000378204 ID1P41134 155 aa12.94□□□□□ -0.34
EXT1-201ENST00000378204 ST6GALNAC2Q9UJ37 374 aa12.94□□□□□ -0.34
EXT1-201ENST00000378204 RELBQ01201 579 aa12.94□□□□□ -0.34
EXT1-201ENST00000378204 ZNF721Q8TF20 911 aa12.94□□□□□ -0.34
EXT1-201ENST00000378204 KCNE5Q9UJ90 142 aa12.94□□□□□ -0.34
EXT1-201ENST00000378204 GTF3C1Q12789 2109 aa12.94□□□□□ -0.34
EXT1-201ENST00000378204 COL24A1Q17RW2 1714 aa12.94□□□□□ -0.34
EXT1-201ENST00000378204 UBE2CO00762 179 aa12.93□□□□□ -0.34
EXT1-201ENST00000378204 FTH1P19P0C7X4 201 aa12.93□□□□□ -0.34
EXT1-201ENST00000378204 ATP6V0CP27449 155 aa12.93□□□□□ -0.34
EXT1-201ENST00000378204 TFF2Q03403 129 aa12.93□□□□□ -0.34
EXT1-201ENST00000378204 ZP4Q12836 540 aa12.93□□□□□ -0.34
EXT1-201ENST00000378204 SCN10AQ9Y5Y9 1956 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms