RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 CDX1P47902 265 aaPredicted RBP10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 CYB5R2Q6BCY4 276 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 AKIRIN1Q9H9L7 192 aaPredicted RBP10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 PIPOXQ9P0Z9 390 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 GAGE10A6NGK3 116 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 H0Y980 276 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 AMY1AP04745 511 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 STARD6P59095 220 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 PSG4Q00888 419 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 ROM1Q03395 351 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 ZNF645Q8N7E2 425 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 AQP10Q96PS8 301 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 SF3B6Q9Y3B4 125 aaKnown RBP10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 UBR3Q6ZT12 1888 aa10.34□□□□□ -0.75
PCDHA9-201ENST00000378122 GZMHP20718 246 aa10.34□□□□□ -0.75
PCDHA9-201ENST00000378122 GNLYP22749 145 aa10.34□□□□□ -0.75
PCDHA9-201ENST00000378122 C4orf51C9J302 202 aa10.34□□□□□ -0.75
PCDHA9-201ENST00000378122 KIR2DL1P43626 348 aaPredicted RBP10.34□□□□□ -0.75
PCDHA9-201ENST00000378122 HIGD1AQ9Y241 93 aa10.34□□□□□ -0.75
PCDHA9-201ENST00000378122 DXOO77932 396 aaKnown RBP10.34□□□□□ -0.75
PCDHA9-201ENST00000378122 CXorf66Q5JRM2 361 aaPredicted RBP10.34□□□□□ -0.75
PCDHA9-201ENST00000378122 TMEM252Q8N6L7 170 aa10.34□□□□□ -0.75
PCDHA9-201ENST00000378122 SNRNP40Q96DI7 357 aaKnown RBP10.34□□□□□ -0.75
PCDHA9-201ENST00000378122 ABHD14BQ96IU4 210 aa10.34□□□□□ -0.75
PCDHA9-201ENST00000378122 SDHCQ99643 169 aaPredicted RBP10.34□□□□□ -0.75
PCDHA9-201ENST00000378122 TRGC1P0CF51 173 aa10.34□□□□□ -0.75
PCDHA9-201ENST00000378122 SNAI3Q3KNW1 292 aa10.34□□□□□ -0.75
PCDHA9-201ENST00000378122 LCN2P80188 198 aa10.34□□□□□ -0.75
PCDHA9-201ENST00000378122 SERF2P84101 59 aa10.34□□□□□ -0.75
PCDHA9-201ENST00000378122 CD200R1LQ6Q8B3 271 aa10.34□□□□□ -0.75
PCDHA9-201ENST00000378122 IL19Q9UHD0 177 aa10.34□□□□□ -0.75
PCDHA9-201ENST00000378122 PTPRFP10586 1907 aa10.34□□□□□ -0.75
PCDHA9-201ENST00000378122 SOD3P08294 240 aa10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 TMEM222Q9H0R3 208 aa10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 TRBV5-7A0A0A0MS05 114 aa10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 LOC101059948A0A1B0GTJ6 334 aa10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 FDCSPQ8NFU4 85 aa10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 Q8WTZ3 238 aa10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 PROB1E7EW31 1015 aa10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 GCSHP23434 173 aa10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 OTX1P32242 354 aaPredicted RBP10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 RND3P61587 244 aa10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 CEACAM21Q3KPI0 293 aa10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 IBA57Q5T440 356 aaKnown RBP10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 C12orf54Q6X4T0 127 aa10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 NFAM1Q8NET5 270 aaPredicted RBP10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 LRRC3BQ96PB8 259 aa10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 A0A0U1RQV5 110 aa10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 DICER1Q9UPY3 1922 aaKnown RBP10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 K7ERU9 68 aa10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 PIN1P1O15428 100 aa10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 ZP1P60852 638 aa10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 WIPI2Q9Y4P8 454 aa10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 COL11A2P13942 1736 aaPredicted RBP10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 MOSPD3O75425 235 aa10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 PGLYRP1O75594 196 aaPredicted RBP10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 CLDN14O95500 239 aa10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 HPRT1P00492 218 aa10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 MFAP2P55001 183 aa10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 ASCL5Q7RTU5 278 aa10.33□□□□□ -0.76
PCDHA9-201ENST00000378122 HBZP02008 142 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 AREGP15514 252 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 PLP1P60201 277 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 SLC22A18ASQ8N1D0 253 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 C5orf66Q9H5L9 145 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 TUBD1Q9UJT1 453 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 IGHV3-49A0A0A0MS15 119 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 PRDX2P32119 198 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 TEX30Q5JUR7 227 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 REC114Q7Z4M0 266 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 C1orf162Q8NEQ5 155 aaPredicted RBP10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 FAM168AQ92567 244 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 RAB37Q96AX2 223 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 RNF115Q9Y4L5 304 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 SPTBP11277 2137 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 OR2H2O95918 312 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 PRB4P10163 310 aaPredicted RBP10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 FGF12P61328 243 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 FXYD3Q14802 87 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 OR1L8Q8NGR8 309 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 GPR146Q96CH1 333 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 UQCR10Q9UDW1 63 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 PQLC2LA1A4F0 135 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 PI4KAP42356 2102 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 SLC25A10Q9UBX3 287 aaPredicted RBP10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 IGHV3OR16-13A0A075B7E8 117 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 IGHV3-74A0A0B4J1X5 117 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 TSPAN2O60636 221 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 ISG15P05161 165 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 CDKN1AP38936 164 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 METRNQ9UJH8 293 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 S4R3C0 116 aa10.32□□□□□ -0.76
PCDHA9-201ENST00000378122 GLIPR1P48060 266 aa10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 FHITP49789 147 aa10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 MESP2Q0VG99 397 aa10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 C1orf174Q8IYL3 243 aa10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 FAM206AQ9NX38 181 aa10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 STRCP1A6NGW2 1772 aa10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 A0A0B4J293 547 aa10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 SPACA3Q8IXA5 215 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms